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Results: 1 to 20 of 63

1.

Mitogenomics reveals phylogeny and repeated motifs in control regions of the deep-sea family Siboglinidae (Annelida).

Li Y, Kocot KM, Schander C, Santos SR, Thornhill DJ, Halanych KM.

Mol Phylogenet Evol. 2015 Feb 23. pii: S1055-7903(15)00038-X. doi: 10.1016/j.ympev.2015.02.008. [Epub ahead of print]

PMID:
25721539
[PubMed - as supplied by publisher]
2.

The ctenophore lineage is older than sponges? That cannot be right! Or can it?

Halanych KM.

J Exp Biol. 2015 Feb 15;218(Pt 4):592-597. Review.

PMID:
25696822
[PubMed - as supplied by publisher]
3.

Phylogenomic resolution of the hemichordate and echinoderm clade.

Cannon JT, Kocot KM, Waits DS, Weese DA, Swalla BJ, Santos SR, Halanych KM.

Curr Biol. 2014 Dec 1;24(23):2827-32. doi: 10.1016/j.cub.2014.10.016. Epub 2014 Nov 6.

PMID:
25454590
[PubMed - in process]
4.

Nemertean toxin genes revealed through transcriptome sequencing.

Whelan NV, Kocot KM, Santos SR, Halanych KM.

Genome Biol Evol. 2014 Nov 27;6(12):3314-25. doi: 10.1093/gbe/evu258.

PMID:
25432940
[PubMed - in process]
Free Article
5.
6.

High-throughput sequencing characterizes intertidal meiofaunal communities in northern gulf of Mexico (dauphin island and mobile bay, alabama).

Brannock PM, Waits DS, Sharma J, Halanych KM.

Biol Bull. 2014 Oct;227(2):161-74.

PMID:
25411374
[PubMed - in process]
7.

Discovering diversity with high-throughput approaches: introduction to a virtual symposium in the biological bulletin.

Halanych KM, Mahon AR.

Biol Bull. 2014 Oct;227(2):91-2. No abstract available.

PMID:
25411368
[PubMed - in process]
8.

Diversity and ancestry of flatworms infecting blood of nontetrapod craniates "fishes".

Orélis-Ribeiro R, Arias CR, Halanych KM, Cribb TH, Bullard SA.

Adv Parasitol. 2014;85:1-64. doi: 10.1016/B978-0-12-800182-0.00001-5. Review.

PMID:
24928179
[PubMed - indexed for MEDLINE]
9.

The ctenophore genome and the evolutionary origins of neural systems.

Moroz LL, Kocot KM, Citarella MR, Dosung S, Norekian TP, Povolotskaya IS, Grigorenko AP, Dailey C, Berezikov E, Buckley KM, Ptitsyn A, Reshetov D, Mukherjee K, Moroz TP, Bobkova Y, Yu F, Kapitonov VV, Jurka J, Bobkov YV, Swore JJ, Girardo DO, Fodor A, Gusev F, Sanford R, Bruders R, Kittler E, Mills CE, Rast JP, Derelle R, Solovyev VV, Kondrashov FA, Swalla BJ, Sweedler JV, Rogaev EI, Halanych KM, Kohn AB.

Nature. 2014 Jun 5;510(7503):109-14. doi: 10.1038/nature13400. Epub 2014 May 21.

PMID:
24847885
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Illuminating the base of the annelid tree using transcriptomics.

Weigert A, Helm C, Meyer M, Nickel B, Arendt D, Hausdorf B, Santos SR, Halanych KM, Purschke G, Bleidorn C, Struck TH.

Mol Biol Evol. 2014 Jun;31(6):1391-401. doi: 10.1093/molbev/msu080. Epub 2014 Feb 23.

PMID:
24567512
[PubMed - indexed for MEDLINE]
11.

Hemichordate molecular phylogeny reveals a novel cold-water clade of harrimaniid acorn worms.

Cannon JT, Swalla BJ, Halanych KM.

Biol Bull. 2013 Dec;225(3):194-204.

PMID:
24445445
[PubMed - indexed for MEDLINE]
Free Article
12.

PhyloTreePruner: A Phylogenetic Tree-Based Approach for Selection of Orthologous Sequences for Phylogenomics.

Kocot KM, Citarella MR, Moroz LL, Halanych KM.

Evol Bioinform Online. 2013 Oct 29;9:429-35. doi: 10.4137/EBO.S12813. eCollection 2013.

PMID:
24250218
[PubMed]
Free PMC Article
13.

Modern Antarctic acorn worms form tubes.

Halanych KM, Cannon JT, Mahon AR, Swalla BJ, Smith CR.

Nat Commun. 2013;4:2738. doi: 10.1038/ncomms3738.

PMID:
24201563
[PubMed - indexed for MEDLINE]
14.

Phylogenomics supports Panpulmonata: opisthobranch paraphyly and key evolutionary steps in a major radiation of gastropod molluscs.

Kocot KM, Halanych KM, Krug PJ.

Mol Phylogenet Evol. 2013 Dec;69(3):764-71. doi: 10.1016/j.ympev.2013.07.001. Epub 2013 Jul 10.

PMID:
23850501
[PubMed - indexed for MEDLINE]
15.

Phylogeography and reproductive variation of the poecilogonous polychaete Boccardia proboscidea (Annelida: Spionidae) along the West Coast of North America.

Oyarzun FX, Mahon AR, Swalla BJ, Halanych KM.

Evol Dev. 2011 Nov-Dec;13(6):489-503. doi: 10.1111/j.1525-142X.2011.00506.x.

PMID:
23016934
[PubMed - indexed for MEDLINE]
16.

Adaptive radiation in extremophilic Dorvilleidae (Annelida): diversification of a single colonizer or multiple independent lineages?

Thornhill DJ, Struck TH, Ebbe B, Lee RW, Mendoza GF, Levin LA, Halanych KM.

Ecol Evol. 2012 Aug;2(8):1958-70. doi: 10.1002/ece3.314. Epub 2012 Jul 16.

PMID:
22957196
[PubMed]
Free PMC Article
17.

Dramatic shifts in benthic microbial eukaryote communities following the Deepwater Horizon oil spill.

Bik HM, Halanych KM, Sharma J, Thomas WK.

PLoS One. 2012;7(6):e38550. doi: 10.1371/journal.pone.0038550. Epub 2012 Jun 6.

PMID:
22701662
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Rapid evolution of the compact and unusual mitochondrial genome in the ctenophore, Pleurobrachia bachei.

Kohn AB, Citarella MR, Kocot KM, Bobkova YV, Halanych KM, Moroz LL.

Mol Phylogenet Evol. 2012 Apr;63(1):203-7. doi: 10.1016/j.ympev.2011.12.009. Epub 2011 Dec 21.

PMID:
22201557
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Detecting the symplesiomorphy trap: a multigene phylogenetic analysis of terebelliform annelids.

Zhong M, Hansen B, Nesnidal M, Golombek A, Halanych KM, Struck TH.

BMC Evol Biol. 2011 Dec 20;11:369. doi: 10.1186/1471-2148-11-369.

PMID:
22185408
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Phylogenomics reveals deep molluscan relationships.

Kocot KM, Cannon JT, Todt C, Citarella MR, Kohn AB, Meyer A, Santos SR, Schander C, Moroz LL, Lieb B, Halanych KM.

Nature. 2011 Sep 4;477(7365):452-6. doi: 10.1038/nature10382.

PMID:
21892190
[PubMed - indexed for MEDLINE]
Free PMC Article
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