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Results: 1 to 20 of 65

1.

Error, signal, and the placement of Ctenophora sister to all other animals.

Whelan NV, Kocot KM, Moroz LL, Halanych KM.

Proc Natl Acad Sci U S A. 2015 Apr 20. pii: 201503453. [Epub ahead of print]

2.

Reconstruction of cyclooxygenase evolution in animals suggests variable, lineage-specific duplications, and homologs with low sequence identity.

Havird JC, Kocot KM, Brannock PM, Cannon JT, Waits DS, Weese DA, Santos SR, Halanych KM.

J Mol Evol. 2015 Apr;80(3-4):193-208. doi: 10.1007/s00239-015-9670-3. Epub 2015 Mar 11.

PMID:
25758350
3.

Mitogenomics reveals phylogeny and repeated motifs in control regions of the deep-sea family Siboglinidae (Annelida).

Li Y, Kocot KM, Schander C, Santos SR, Thornhill DJ, Halanych KM.

Mol Phylogenet Evol. 2015 Apr;85:221-9. doi: 10.1016/j.ympev.2015.02.008. Epub 2015 Feb 24.

PMID:
25721539
4.

The ctenophore lineage is older than sponges? That cannot be right! Or can it?

Halanych KM.

J Exp Biol. 2015 Feb 15;218(Pt 4):592-7. doi: 10.1242/jeb.111872. Review.

PMID:
25696822
5.

Phylogenomic resolution of the hemichordate and echinoderm clade.

Cannon JT, Kocot KM, Waits DS, Weese DA, Swalla BJ, Santos SR, Halanych KM.

Curr Biol. 2014 Dec 1;24(23):2827-32. doi: 10.1016/j.cub.2014.10.016. Epub 2014 Nov 6.

PMID:
25454590
6.

Nemertean toxin genes revealed through transcriptome sequencing.

Whelan NV, Kocot KM, Santos SR, Halanych KM.

Genome Biol Evol. 2014 Nov 27;6(12):3314-25. doi: 10.1093/gbe/evu258.

8.
9.

Discovering diversity with high-throughput approaches: introduction to a virtual symposium in the biological bulletin.

Halanych KM, Mahon AR.

Biol Bull. 2014 Oct;227(2):91-2. No abstract available.

PMID:
25411368
10.

Diversity and ancestry of flatworms infecting blood of nontetrapod craniates "fishes".

Orélis-Ribeiro R, Arias CR, Halanych KM, Cribb TH, Bullard SA.

Adv Parasitol. 2014;85:1-64. doi: 10.1016/B978-0-12-800182-0.00001-5. Review.

PMID:
24928179
11.

The ctenophore genome and the evolutionary origins of neural systems.

Moroz LL, Kocot KM, Citarella MR, Dosung S, Norekian TP, Povolotskaya IS, Grigorenko AP, Dailey C, Berezikov E, Buckley KM, Ptitsyn A, Reshetov D, Mukherjee K, Moroz TP, Bobkova Y, Yu F, Kapitonov VV, Jurka J, Bobkov YV, Swore JJ, Girardo DO, Fodor A, Gusev F, Sanford R, Bruders R, Kittler E, Mills CE, Rast JP, Derelle R, Solovyev VV, Kondrashov FA, Swalla BJ, Sweedler JV, Rogaev EI, Halanych KM, Kohn AB.

Nature. 2014 Jun 5;510(7503):109-14. doi: 10.1038/nature13400. Epub 2014 May 21.

12.

Illuminating the base of the annelid tree using transcriptomics.

Weigert A, Helm C, Meyer M, Nickel B, Arendt D, Hausdorf B, Santos SR, Halanych KM, Purschke G, Bleidorn C, Struck TH.

Mol Biol Evol. 2014 Jun;31(6):1391-401. doi: 10.1093/molbev/msu080. Epub 2014 Feb 23.

PMID:
24567512
13.

Hemichordate molecular phylogeny reveals a novel cold-water clade of harrimaniid acorn worms.

Cannon JT, Swalla BJ, Halanych KM.

Biol Bull. 2013 Dec;225(3):194-204.

14.

PhyloTreePruner: A Phylogenetic Tree-Based Approach for Selection of Orthologous Sequences for Phylogenomics.

Kocot KM, Citarella MR, Moroz LL, Halanych KM.

Evol Bioinform Online. 2013 Oct 29;9:429-35. doi: 10.4137/EBO.S12813. eCollection 2013.

15.

Modern Antarctic acorn worms form tubes.

Halanych KM, Cannon JT, Mahon AR, Swalla BJ, Smith CR.

Nat Commun. 2013;4:2738. doi: 10.1038/ncomms3738.

PMID:
24201563
16.

Phylogenomics supports Panpulmonata: opisthobranch paraphyly and key evolutionary steps in a major radiation of gastropod molluscs.

Kocot KM, Halanych KM, Krug PJ.

Mol Phylogenet Evol. 2013 Dec;69(3):764-71. doi: 10.1016/j.ympev.2013.07.001. Epub 2013 Jul 10.

PMID:
23850501
17.

Phylogeography and reproductive variation of the poecilogonous polychaete Boccardia proboscidea (Annelida: Spionidae) along the West Coast of North America.

Oyarzun FX, Mahon AR, Swalla BJ, Halanych KM.

Evol Dev. 2011 Nov-Dec;13(6):489-503. doi: 10.1111/j.1525-142X.2011.00506.x.

PMID:
23016934
18.

Adaptive radiation in extremophilic Dorvilleidae (Annelida): diversification of a single colonizer or multiple independent lineages?

Thornhill DJ, Struck TH, Ebbe B, Lee RW, Mendoza GF, Levin LA, Halanych KM.

Ecol Evol. 2012 Aug;2(8):1958-70. doi: 10.1002/ece3.314. Epub 2012 Jul 16.

19.

Dramatic shifts in benthic microbial eukaryote communities following the Deepwater Horizon oil spill.

Bik HM, Halanych KM, Sharma J, Thomas WK.

PLoS One. 2012;7(6):e38550. doi: 10.1371/journal.pone.0038550. Epub 2012 Jun 6.

20.

Rapid evolution of the compact and unusual mitochondrial genome in the ctenophore, Pleurobrachia bachei.

Kohn AB, Citarella MR, Kocot KM, Bobkova YV, Halanych KM, Moroz LL.

Mol Phylogenet Evol. 2012 Apr;63(1):203-7. doi: 10.1016/j.ympev.2011.12.009. Epub 2011 Dec 21.

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