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Results: 1 to 20 of 35

1.

The impact of automated filtering of BLAST-determined homologs in the phylogenetic detection of horizontal gene transfer from a transcriptome assembly.

Wisecaver JH, Hackett JD.

Mol Phylogenet Evol. 2014 Feb;71:184-92. doi: 10.1016/j.ympev.2013.11.016. Epub 2013 Dec 7.

PMID:
24321593
[PubMed - indexed for MEDLINE]
2.

Horizontal gene transfer is a significant driver of gene innovation in dinoflagellates.

Wisecaver JH, Brosnahan ML, Hackett JD.

Genome Biol Evol. 2013;5(12):2368-81. doi: 10.1093/gbe/evt179.

PMID:
24259313
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Differentiating Common Predictors and Outcomes of Marijuana Initiation: A Retrospective Longitudinal Analysis.

Siegel JT, Crano WD, Alvaro EM, Lac A, Hackett JD, Hohman ZP.

Subst Use Misuse. 2013 Aug 1. [Epub ahead of print]

PMID:
23905581
[PubMed - as supplied by publisher]
4.

Allelopathy as an emergent, exploitable public good in the bloom-forming microalga Prymnesium parvum.

Driscoll WW, Espinosa NJ, Eldakar OT, Hackett JD.

Evolution. 2013 Jun;67(6):1582-90. doi: 10.1111/evo.12030. Epub 2013 Jan 11.

PMID:
23730753
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Bio-crude transcriptomics: gene discovery and metabolic network reconstruction for the biosynthesis of the terpenome of the hydrocarbon oil-producing green alga, Botryococcus braunii race B (Showa).

Molnár I, Lopez D, Wisecaver JH, Devarenne TP, Weiss TL, Pellegrini M, Hackett JD.

BMC Genomics. 2012 Oct 30;13:576. doi: 10.1186/1471-2164-13-576.

PMID:
23110428
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

ANALYSIS OF ALEXANDRIUM TAMARENSE (DINOPHYCEAE) GENES REVEALS THE COMPLEX EVOLUTIONARY HISTORY OF A MICROBIAL EUKARYOTE().

Chan CX, Soares MB, Bonaldo MF, Wisecaver JH, Hackett JD, Anderson DM, Erdner DL, Bhattacharya D.

J Phycol. 2012 Oct 1;48(5):1130-1142. Epub 2012 Jun 19.

PMID:
23066170
[PubMed]
Free PMC Article
7.

Evolution of saxitoxin synthesis in cyanobacteria and dinoflagellates.

Hackett JD, Wisecaver JH, Brosnahan ML, Kulis DM, Anderson DM, Bhattacharya D, Plumley FG, Erdner DL.

Mol Biol Evol. 2013 Jan;30(1):70-8. doi: 10.1093/molbev/mss142. Epub 2012 May 23.

PMID:
22628533
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Dinoflagellate genome evolution.

Wisecaver JH, Hackett JD.

Annu Rev Microbiol. 2011;65:369-87. doi: 10.1146/annurev-micro-090110-102841. Review.

PMID:
21682644
[PubMed - indexed for MEDLINE]
9.

Personality and motivational antecedents of activism and civic engagement.

Omoto AM, Snyder M, Hackett JD.

J Pers. 2010 Dec;78(6):1703-34. doi: 10.1111/j.1467-6494.2010.00667.x. Epub 2010 Oct 12.

PMID:
21039529
[PubMed - indexed for MEDLINE]
10.

Transcriptome analysis reveals nuclear-encoded proteins for the maintenance of temporary plastids in the dinoflagellate Dinophysis acuminata.

Wisecaver JH, Hackett JD.

BMC Genomics. 2010 Jun 10;11:366. doi: 10.1186/1471-2164-11-366.

PMID:
20537123
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Transcriptome profiling of a toxic dinoflagellate reveals a gene-rich protist and a potential impact on gene expression due to bacterial presence.

Moustafa A, Evans AN, Kulis DM, Hackett JD, Erdner DL, Anderson DM, Bhattacharya D.

PLoS One. 2010 Mar 12;5(3):e9688. doi: 10.1371/journal.pone.0009688.

PMID:
20300646
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Origin of saxitoxin biosynthetic genes in cyanobacteria.

Moustafa A, Loram JE, Hackett JD, Anderson DM, Plumley FG, Bhattacharya D.

PLoS One. 2009 Jun 1;4(6):e5758. doi: 10.1371/journal.pone.0005758.

PMID:
19484122
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Expressed sequence tags: normalization and subtraction of cDNA libraries expressed sequence tags\ normalization and subtraction of cDNA libraries.

Soares MB, de Fatima Bonaldo M, Hackett JD, Bhattacharya D.

Methods Mol Biol. 2009;533:109-22. doi: 10.1007/978-1-60327-136-3_6.

PMID:
19277560
[PubMed - indexed for MEDLINE]
14.

Triassic origin and early radiation of multicellular volvocine algae.

Herron MD, Hackett JD, Aylward FO, Michod RE.

Proc Natl Acad Sci U S A. 2009 Mar 3;106(9):3254-8. doi: 10.1073/pnas.0811205106. Epub 2009 Feb 17.

PMID:
19223580
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Phylogenomic analysis supports the monophyly of cryptophytes and haptophytes and the association of rhizaria with chromalveolates.

Hackett JD, Yoon HS, Li S, Reyes-Prieto A, Rümmele SE, Bhattacharya D.

Mol Biol Evol. 2007 Aug;24(8):1702-13. Epub 2007 May 7.

PMID:
17488740
[PubMed - indexed for MEDLINE]
Free Article
16.

Cyanobacterial contribution to algal nuclear genomes is primarily limited to plastid functions.

Reyes-Prieto A, Hackett JD, Soares MB, Bonaldo MF, Bhattacharya D.

Curr Biol. 2006 Dec 5;16(23):2320-5.

PMID:
17141613
[PubMed - indexed for MEDLINE]
Free Article
17.

Phylogenomic analysis identifies red algal genes of endosymbiotic origin in the chromalveolates.

Li S, Nosenko T, Hackett JD, Bhattacharya D.

Mol Biol Evol. 2006 Mar;23(3):663-74. Epub 2005 Dec 15.

PMID:
16357039
[PubMed - indexed for MEDLINE]
Free Article
18.

Insights into a dinoflagellate genome through expressed sequence tag analysis.

Hackett JD, Scheetz TE, Yoon HS, Soares MB, Bonaldo MF, Casavant TL, Bhattacharya D.

BMC Genomics. 2005 May 29;6:80.

PMID:
15921535
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Tertiary endosymbiosis driven genome evolution in dinoflagellate algae.

Yoon HS, Hackett JD, Van Dolah FM, Nosenko T, Lidie KL, Bhattacharya D.

Mol Biol Evol. 2005 May;22(5):1299-308. Epub 2005 Mar 2.

PMID:
15746017
[PubMed - indexed for MEDLINE]
Free Article
20.

Dinoflagellates: a remarkable evolutionary experiment.

Hackett JD, Anderson DM, Erdner DL, Bhattacharya D.

Am J Bot. 2004 Oct;91(10):1523-34. doi: 10.3732/ajb.91.10.1523.

PMID:
21652307
[PubMed]
Free Article

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