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Results: 1 to 20 of 32

1.

Meta-Analysis of Retrograde Signaling in Arabidopsis thaliana Reveals a Core Module of Genes Embedded in Complex Cellular Signaling Networks.

Gläßer C, Haberer G, Finkemeier I, Pfannschmidt T, Kleine T, Leister D, Dietz KJ, Häusler RE, Grimm B, Mayer KF.

Mol Plant. 2014 Jul;7(7):1167-90. doi: 10.1093/mp/ssu042. Epub 2014 Apr 9.

PMID:
24719466
[PubMed - in process]
2.

The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle.

Wang W, Haberer G, Gundlach H, Gläßer C, Nussbaumer T, Luo MC, Lomsadze A, Borodovsky M, Kerstetter RA, Shanklin J, Byrant DW, Mockler TC, Appenroth KJ, Grimwood J, Jenkins J, Chow J, Choi C, Adam C, Cao XH, Fuchs J, Schubert I, Rokhsar D, Schmutz J, Michael TP, Mayer KF, Messing J.

Nat Commun. 2014;5:3311. doi: 10.1038/ncomms4311.

PMID:
24548928
[PubMed - in process]
Free PMC Article
3.

Fifteen million years of evolution in the Oryza genus shows extensive gene family expansion.

Jacquemin J, Ammiraju JS, Haberer G, Billheimer DD, Yu Y, Liu LC, Rivera LF, Mayer K, Chen M, Wing RA.

Mol Plant. 2014 Apr;7(4):642-56. doi: 10.1093/mp/sst149. Epub 2013 Nov 8.

PMID:
24214894
[PubMed - in process]
Free Article
4.

GABI-DUPLO: a collection of double mutants to overcome genetic redundancy in Arabidopsis thaliana.

Bolle C, Huep G, Kleinbölting N, Haberer G, Mayer K, Leister D, Weisshaar B.

Plant J. 2013 Jul;75(1):157-71. doi: 10.1111/tpj.12197. Epub 2013 May 7.

PMID:
23573814
[PubMed - indexed for MEDLINE]
5.

Development of a high density 600K SNP genotyping array for chicken.

Kranis A, Gheyas AA, Boschiero C, Turner F, Yu L, Smith S, Talbot R, Pirani A, Brew F, Kaiser P, Hocking PM, Fife M, Salmon N, Fulton J, Strom TM, Haberer G, Weigend S, Preisinger R, Gholami M, Qanbari S, Simianer H, Watson KA, Woolliams JA, Burt DW.

BMC Genomics. 2013 Jan 28;14:59. doi: 10.1186/1471-2164-14-59.

PMID:
23356797
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A high resolution genome-wide scan for significant selective sweeps: an application to pooled sequence data in laying chickens.

Qanbari S, Strom TM, Haberer G, Weigend S, Gheyas AA, Turner F, Burt DW, Preisinger R, Gianola D, Simianer H.

PLoS One. 2012;7(11):e49525. doi: 10.1371/journal.pone.0049525. Epub 2012 Nov 29.

PMID:
23209582
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Intracompartmental and intercompartmental transcriptional networks coordinate the expression of genes for organellar functions.

Leister D, Wang X, Haberer G, Mayer KF, Kleine T.

Plant Physiol. 2011 Sep;157(1):386-404. doi: 10.1104/pp.111.177691. Epub 2011 Jul 20.

PMID:
21775496
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change.

Hu TT, Pattyn P, Bakker EG, Cao J, Cheng JF, Clark RM, Fahlgren N, Fawcett JA, Grimwood J, Gundlach H, Haberer G, Hollister JD, Ossowski S, Ottilar RP, Salamov AA, Schneeberger K, Spannagl M, Wang X, Yang L, Nasrallah ME, Bergelson J, Carrington JC, Gaut BS, Schmutz J, Mayer KF, Van de Peer Y, Grigoriev IV, Nordborg M, Weigel D, Guo YL.

Nat Genet. 2011 May;43(5):476-81. doi: 10.1038/ng.807. Epub 2011 Apr 10.

PMID:
21478890
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Impact of natural genetic variation on the transcriptome of autotetraploid Arabidopsis thaliana.

Yu Z, Haberer G, Matthes M, Rattei T, Mayer KF, Gierl A, Torres-Ruiz RA.

Proc Natl Acad Sci U S A. 2010 Oct 12;107(41):17809-14. doi: 10.1073/pnas.1000852107. Epub 2010 Sep 27.

PMID:
20876110
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Exploring the genomes: from Arabidopsis to crops.

Spannagl M, Mayer K, Durner J, Haberer G, Fröhlich A.

J Plant Physiol. 2011 Jan 1;168(1):3-8. doi: 10.1016/j.jplph.2010.07.008. Review.

PMID:
20817312
[PubMed - indexed for MEDLINE]
11.

Identification and genetic analysis of the APOSPORY locus in Hypericum perforatum L.

Schallau A, Arzenton F, Johnston AJ, Hähnel U, Koszegi D, Blattner FR, Altschmied L, Haberer G, Barcaccia G, Bäumlein H.

Plant J. 2010 Jun 1;62(5):773-84. doi: 10.1111/j.1365-313X.2010.04188.x. Epub 2010 Feb 26.

PMID:
20202173
[PubMed - indexed for MEDLINE]
12.

A composite transcriptional signature differentiates responses towards closely related herbicides in Arabidopsis thaliana and Brassica napus.

Das M, Reichman JR, Haberer G, Welzl G, Aceituno FF, Mader MT, Watrud LS, Pfleeger TG, Gutiérrez RA, Schäffner AR, Olszyk DM.

Plant Mol Biol. 2010 Mar;72(4-5):545-56. doi: 10.1007/s11103-009-9590-y. Epub 2009 Dec 31.

PMID:
20043233
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Discovery of cis-elements between sorghum and rice using co-expression and evolutionary conservation.

Wang X, Haberer G, Mayer KF.

BMC Genomics. 2009 Jun 26;10:284. doi: 10.1186/1471-2164-10-284.

PMID:
19558665
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The Sorghum bicolor genome and the diversification of grasses.

Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, Freeling M, Gingle AR, Hash CT, Keller B, Klein P, Kresovich S, McCann MC, Ming R, Peterson DG, Mehboob-ur-Rahman, Ware D, Westhoff P, Mayer KF, Messing J, Rokhsar DS.

Nature. 2009 Jan 29;457(7229):551-6. doi: 10.1038/nature07723.

PMID:
19189423
[PubMed - indexed for MEDLINE]
15.

The complete nucleotide sequences of the 5 genetically distinct plastid genomes of Oenothera, subsection Oenothera: II. A microevolutionary view using bioinformatics and formal genetic data.

Greiner S, Wang X, Herrmann RG, Rauwolf U, Mayer K, Haberer G, Meurer J.

Mol Biol Evol. 2008 Sep;25(9):2019-30. doi: 10.1093/molbev/msn149. Epub 2008 Jul 8.

PMID:
18614526
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The complete nucleotide sequences of the five genetically distinct plastid genomes of Oenothera, subsection Oenothera: I. sequence evaluation and plastome evolution.

Greiner S, Wang X, Rauwolf U, Silber MV, Mayer K, Meurer J, Haberer G, Herrmann RG.

Nucleic Acids Res. 2008 Apr;36(7):2366-78. doi: 10.1093/nar/gkn081. Epub 2008 Feb 24.

PMID:
18299283
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Nuclear localization of the mutant protein phosphatase abi1 is required for insensitivity towards ABA responses in Arabidopsis.

Moes D, Himmelbach A, Korte A, Haberer G, Grill E.

Plant J. 2008 Jun;54(5):806-19. doi: 10.1111/j.1365-313X.2008.03454.x. Epub 2008 Feb 22.

PMID:
18298671
[PubMed - indexed for MEDLINE]
18.

MIPS plant genome information resources.

Spannagl M, Haberer G, Ernst R, Schoof H, Mayer KF.

Methods Mol Biol. 2007;406:137-59.

PMID:
18287691
[PubMed - indexed for MEDLINE]
19.

The Rice Annotation Project Database (RAP-DB): 2008 update.

Rice Annotation Project, Tanaka T, Antonio BA, Kikuchi S, Matsumoto T, Nagamura Y, Numa H, Sakai H, Wu J, Itoh T, Sasaki T, Aono R, Fujii Y, Habara T, Harada E, Kanno M, Kawahara Y, Kawashima H, Kubooka H, Matsuya A, Nakaoka H, Saichi N, Sanbonmatsu R, Sato Y, Shinso Y, Suzuki M, Takeda J, Tanino M, Todokoro F, Yamaguchi K, Yamamoto N, Yamasaki C, Imanishi T, Okido T, Tada M, Ikeo K, Tateno Y, Gojobori T, Lin YC, Wei FJ, Hsing YI, Zhao Q, Han B, Kramer MR, McCombie RW, Lonsdale D, O'Donovan CC, Whitfield EJ, Apweiler R, Koyanagi KO, Khurana JP, Raghuvanshi S, Singh NK, Tyagi AK, Haberer G, Fujisawa M, Hosokawa S, Ito Y, Ikawa H, Shibata M, Yamamoto M, Bruskiewich RM, Hoen DR, Bureau TE, Namiki N, Ohyanagi H, Sakai Y, Nobushima S, Sakata K, Barrero RA, Sato Y, Souvorov A, Smith-White B, Tatusova T, An S, An G, OOta S, Fuks G, Fuks G, Messing J, Christie KR, Lieberherr D, Kim H, Zuccolo A, Wing RA, Nobuta K, Green PJ, Lu C, Meyers BC, Chaparro C, Piegu B, Panaud O, Echeverria M.

Nucleic Acids Res. 2008 Jan;36(Database issue):D1028-33. Epub 2007 Dec 17.

PMID:
18089549
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Molecular characterisation of the STRUBBELIG-RECEPTOR FAMILY of genes encoding putative leucine-rich repeat receptor-like kinases in Arabidopsis thaliana.

Eyüboglu B, Pfister K, Haberer G, Chevalier D, Fuchs A, Mayer KF, Schneitz K.

BMC Plant Biol. 2007 Mar 30;7:16.

PMID:
17397538
[PubMed - indexed for MEDLINE]
Free PMC Article

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