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Results: 1 to 20 of 64

1.

Expression analysis of all protease genes reveals cathepsin k to be overexpressed in glioblastoma.

Verbovšek U, Motaln H, Rotter A, Atai NA, Gruden K, Van Noorden CJ, Lah TT.

PLoS One. 2014 Oct 30;9(10):e111819. doi: 10.1371/journal.pone.0111819. eCollection 2014.

PMID:
25356585
[PubMed - in process]
Free PMC Article
2.

Potato virus Y infection hinders potato defence response and renders plants more vulnerable to Colorado potato beetle attack.

Petek M, Rotter A, Kogovšek P, Baebler S, Mithöfer A, Gruden K.

Mol Ecol. 2014 Nov;23(21):5378-5391. doi: 10.1111/mec.12932. Epub 2014 Oct 9.

PMID:
25251011
[PubMed - as supplied by publisher]
3.

GMO quantification: valuable experience and insights for the future.

Milavec M, Dobnik D, Yang L, Zhang D, Gruden K, Zel J.

Anal Bioanal Chem. 2014 Oct;406(26):6485-97. doi: 10.1007/s00216-014-8077-0. Epub 2014 Aug 16.

PMID:
25182968
[PubMed - in process]
4.

Identification of plasma biomarker candidates in glioblastoma using an antibody-array-based proteomic approach.

Zupancic K, Blejec A, Herman A, Veber M, Verbovsek U, Korsic M, Knezevic M, Rozman P, Turnsek TL, Gruden K, Motaln H.

Radiol Oncol. 2014 Jul 10;48(3):257-66. doi: 10.2478/raon-2014-0014. eCollection 2014 Sep.

PMID:
25177240
[PubMed]
Free PMC Article
5.

Optimising droplet digital PCR analysis approaches for detection and quantification of bacteria: a case study of fire blight and potato brown rot.

Dreo T, Pirc M, Ramšak Ž, Pavšič J, Milavec M, Zel J, Gruden K.

Anal Bioanal Chem. 2014 Oct;406(26):6513-28. doi: 10.1007/s00216-014-8084-1. Epub 2014 Aug 31.

PMID:
25173868
[PubMed - in process]
6.

Involvement of potato (Solanum tuberosum L.) MKK6 in response to potato virus Y.

Lazar A, Coll A, Dobnik D, Baebler S, Bedina-Zavec A, Zel J, Gruden K.

PLoS One. 2014 Aug 11;9(8):e104553. doi: 10.1371/journal.pone.0104553. eCollection 2014.

PMID:
25111695
[PubMed - in process]
Free PMC Article
7.

GMOseek: a user friendly tool for optimized GMO testing.

Morisset D, Novak PK, Zupanič D, Gruden K, Lavrač N, Žel J.

BMC Bioinformatics. 2014 Aug 1;15:258. doi: 10.1186/1471-2105-15-258.

PMID:
25084968
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Plant defence model revisions through iterative minimisation of constraint violations.

Miljkovic D, Depolli M, Stare T, Mozetič I, Petek M, Gruden K, Lavrač N.

Int J Comput Biol Drug Des. 2014;7(1):61-79. doi: 10.1504/IJCBDD.2014.058588. Epub 2014 Jan 9.

PMID:
24429503
[PubMed - in process]
9.

Salicylic acid is an indispensable component of the Ny-1 resistance-gene-mediated response against Potato virus Y infection in potato.

Baebler Š, Witek K, Petek M, Stare K, Tušek-Žnidarič M, Pompe-Novak M, Renaut J, Szajko K, Strzelczyk-Żyta D, Marczewski W, Morgiewicz K, Gruden K, Hennig J.

J Exp Bot. 2014 Mar;65(4):1095-109. doi: 10.1093/jxb/ert447. Epub 2014 Jan 13.

PMID:
24420577
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Insertion of a specific fungal 3'-phosphoadenosine-5'-phosphatase motif into a plant homologue improves halotolerance and drought tolerance of plants.

Gašparič MB, Lenassi M, Gostinčar C, Rotter A, Plemenitaš A, Gunde-Cimerman N, Gruden K, Zel J.

PLoS One. 2013 Dec 9;8(12):e81872. doi: 10.1371/journal.pone.0081872. eCollection 2013.

PMID:
24349144
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

SACE_5599, a putative regulatory protein, is involved in morphological differentiation and erythromycin production in Saccharopolyspora erythraea.

Kirm B, Magdevska V, Tome M, Horvat M, Karničar K, Petek M, Vidmar R, Baebler S, Jamnik P, Fujs Š, Horvat J, Fonovič M, Turk B, Gruden K, Petković H, Kosec G.

Microb Cell Fact. 2013 Dec 17;12:126. doi: 10.1186/1475-2859-12-126.

PMID:
24341557
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Inhibition of the growth of colorado potato beetle larvae by macrocypins, protease inhibitors from the parasol mushroom.

Smid I, Gruden K, Buh Gašparič M, Koruza K, Petek M, Pohleven J, Brzin J, Kos J, Zel J, Sabotič J.

J Agric Food Chem. 2013 Dec 26;61(51):12499-509. doi: 10.1021/jf403615f. Epub 2013 Dec 12.

PMID:
24295324
[PubMed - indexed for MEDLINE]
13.

β-1,3-glucanase class III promotes spread of PVYNTN and improves in planta protein production.

Dobnik D, Baebler S, Kogovšek P, Pompe-Novak M, Stebih D, Panter G, Janež N, Morisset D, Zel J, Gruden K.

Plant Biotechnol Rep. 2013;7:547-555. Epub 2013 Aug 27.

PMID:
24273610
[PubMed]
Free PMC Article
14.

GoMapMan: integration, consolidation and visualization of plant gene annotations within the MapMan ontology.

Ramsak Ž, Baebler Š, Rotter A, Korbar M, Mozetic I, Usadel B, Gruden K.

Nucleic Acids Res. 2014 Jan;42(Database issue):D1167-75. doi: 10.1093/nar/gkt1056. Epub 2013 Nov 4.

PMID:
24194592
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The GMOseek matrix: a decision support tool for optimizing the detection of genetically modified plants.

Block A, Debode F, Grohmann L, Hulin J, Taverniers I, Kluga L, Barbau-Piednoir E, Broeders S, Huber I, Van den Bulcke M, Heinze P, Berben G, Busch U, Roosens N, Janssen E, Žel J, Gruden K, Morisset D.

BMC Bioinformatics. 2013 Aug 22;14:256. doi: 10.1186/1471-2105-14-256.

PMID:
23965170
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Quantitative analysis of food and feed samples with droplet digital PCR.

Morisset D, Štebih D, Milavec M, Gruden K, Žel J.

PLoS One. 2013 May 2;8(5):e62583. doi: 10.1371/journal.pone.0062583. Print 2013.

PMID:
23658750
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Isolation of small SSEA-4-positive putative stem cells from the ovarian surface epithelium of adult human ovaries by two different methods.

Virant-Klun I, Skutella T, Hren M, Gruden K, Cvjeticanin B, Vogler A, Sinkovec J.

Biomed Res Int. 2013;2013:690415. doi: 10.1155/2013/690415. Epub 2013 Feb 18.

PMID:
23509763
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Signalling network construction for modelling plant defence response.

Miljkovic D, Stare T, Mozetič I, Podpečan V, Petek M, Witek K, Dermastia M, Lavrač N, Gruden K.

PLoS One. 2012;7(12):e51822. doi: 10.1371/journal.pone.0051822. Epub 2012 Dec 18.

PMID:
23272172
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Real-time PCR for specific detection of three phytoplasmas from the apple proliferation group.

Mehle N, Nikolić P, Gruden K, Ravnikar M, Dermastia M.

Methods Mol Biol. 2013;938:269-81. doi: 10.1007/978-1-62703-089-2_23.

PMID:
22987423
[PubMed - indexed for MEDLINE]
20.

A real-time PCR detection system for the bois noir and flavescence dorée phytoplasmas and quantification of the target DNA.

Mehle N, Prezelj N, Hren M, Boben J, Gruden K, Ravnikar M, Dermastia M.

Methods Mol Biol. 2013;938:253-68. doi: 10.1007/978-1-62703-089-2_22.

PMID:
22987422
[PubMed - indexed for MEDLINE]

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