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Results: 1 to 20 of 67

1.

Transcriptomic variation between different Chinese hamster ovary cell lines.

Blas M, Francky A, Jamnikar U, Gaser D, Baebler Š, Blejec A, Gruden K.

Biotechnol Lett. 2015 May 13. [Epub ahead of print]

PMID:
25967036
2.

Analysis of Glioblastoma Patients' Plasma Revealed the Presence of MicroRNAs with a Prognostic Impact on Survival and Those of Viral Origin.

Herman A, Gruden K, Blejec A, Podpečan V, Motaln H, Rožman P, Hren M, Zupančič K, Veber M, Verbovšek U, Lah Turnšek T, Porčnik A, Koršič M, Knežević M, Jeras M.

PLoS One. 2015 May 7;10(5):e0125791. doi: 10.1371/journal.pone.0125791. eCollection 2015.

3.

Fluorescently tagged Potato virus Y: a versatile tool for functional analysis of plant-virus interactions.

Rupar M, Faurez F, Tribodet M, Gutierrez-Aguirre I, Delaunay A, Glais L, Kriznik M, Dobnik D, Gruden K, Jacquot E, Ravnikar M.

Mol Plant Microbe Interact. 2015 Mar 11. [Epub ahead of print]

PMID:
25761209
4.

Expression analysis of all protease genes reveals cathepsin K to be overexpressed in glioblastoma.

Verbovšek U, Motaln H, Rotter A, Atai NA, Gruden K, Van Noorden CJ, Lah TT.

PLoS One. 2014 Oct 30;9(10):e111819. doi: 10.1371/journal.pone.0111819. eCollection 2014.

5.

Potato virus Y infection hinders potato defence response and renders plants more vulnerable to Colorado potato beetle attack.

Petek M, Rotter A, Kogovšek P, Baebler S, Mithöfer A, Gruden K.

Mol Ecol. 2014 Nov;23(21):5378-91. doi: 10.1111/mec.12932. Epub 2014 Oct 9.

6.

GMO quantification: valuable experience and insights for the future.

Milavec M, Dobnik D, Yang L, Zhang D, Gruden K, Zel J.

Anal Bioanal Chem. 2014 Oct;406(26):6485-97. doi: 10.1007/s00216-014-8077-0. Epub 2014 Aug 16.

PMID:
25182968
7.

Identification of plasma biomarker candidates in glioblastoma using an antibody-array-based proteomic approach.

Zupancic K, Blejec A, Herman A, Veber M, Verbovsek U, Korsic M, Knezevic M, Rozman P, Turnsek TL, Gruden K, Motaln H.

Radiol Oncol. 2014 Jul 10;48(3):257-66. doi: 10.2478/raon-2014-0014. eCollection 2014 Sep.

8.

Optimising droplet digital PCR analysis approaches for detection and quantification of bacteria: a case study of fire blight and potato brown rot.

Dreo T, Pirc M, Ramšak Ž, Pavšič J, Milavec M, Zel J, Gruden K.

Anal Bioanal Chem. 2014 Oct;406(26):6513-28. doi: 10.1007/s00216-014-8084-1. Epub 2014 Aug 31.

PMID:
25173868
9.

Involvement of potato (Solanum tuberosum L.) MKK6 in response to potato virus Y.

Lazar A, Coll A, Dobnik D, Baebler S, Bedina-Zavec A, Zel J, Gruden K.

PLoS One. 2014 Aug 11;9(8):e104553. doi: 10.1371/journal.pone.0104553. eCollection 2014.

10.

GMOseek: a user friendly tool for optimized GMO testing.

Morisset D, Novak PK, Zupanič D, Gruden K, Lavrač N, Žel J.

BMC Bioinformatics. 2014 Aug 1;15:258. doi: 10.1186/1471-2105-15-258.

11.

Plant defence model revisions through iterative minimisation of constraint violations.

Miljkovic D, Depolli M, Stare T, Mozetič I, Petek M, Gruden K, Lavrač N.

Int J Comput Biol Drug Des. 2014;7(1):61-79. doi: 10.1504/IJCBDD.2014.058588. Epub 2014 Jan 9.

PMID:
24429503
12.

Salicylic acid is an indispensable component of the Ny-1 resistance-gene-mediated response against Potato virus Y infection in potato.

Baebler Š, Witek K, Petek M, Stare K, Tušek-Žnidarič M, Pompe-Novak M, Renaut J, Szajko K, Strzelczyk-Żyta D, Marczewski W, Morgiewicz K, Gruden K, Hennig J.

J Exp Bot. 2014 Mar;65(4):1095-109. doi: 10.1093/jxb/ert447. Epub 2014 Jan 13.

13.

Insertion of a specific fungal 3'-phosphoadenosine-5'-phosphatase motif into a plant homologue improves halotolerance and drought tolerance of plants.

Gašparič MB, Lenassi M, Gostinčar C, Rotter A, Plemenitaš A, Gunde-Cimerman N, Gruden K, Zel J.

PLoS One. 2013 Dec 9;8(12):e81872. doi: 10.1371/journal.pone.0081872. eCollection 2013.

14.

SACE_5599, a putative regulatory protein, is involved in morphological differentiation and erythromycin production in Saccharopolyspora erythraea.

Kirm B, Magdevska V, Tome M, Horvat M, Karničar K, Petek M, Vidmar R, Baebler S, Jamnik P, Fujs Š, Horvat J, Fonovič M, Turk B, Gruden K, Petković H, Kosec G.

Microb Cell Fact. 2013 Dec 17;12:126. doi: 10.1186/1475-2859-12-126.

15.

Inhibition of the growth of colorado potato beetle larvae by macrocypins, protease inhibitors from the parasol mushroom.

Smid I, Gruden K, Buh Gašparič M, Koruza K, Petek M, Pohleven J, Brzin J, Kos J, Zel J, Sabotič J.

J Agric Food Chem. 2013 Dec 26;61(51):12499-509. doi: 10.1021/jf403615f. Epub 2013 Dec 12.

PMID:
24295324
16.

β-1,3-glucanase class III promotes spread of PVYNTN and improves in planta protein production.

Dobnik D, Baebler S, Kogovšek P, Pompe-Novak M, Stebih D, Panter G, Janež N, Morisset D, Zel J, Gruden K.

Plant Biotechnol Rep. 2013;7:547-555. Epub 2013 Aug 27.

17.

GoMapMan: integration, consolidation and visualization of plant gene annotations within the MapMan ontology.

Ramsak Ž, Baebler Š, Rotter A, Korbar M, Mozetic I, Usadel B, Gruden K.

Nucleic Acids Res. 2014 Jan;42(Database issue):D1167-75. doi: 10.1093/nar/gkt1056. Epub 2013 Nov 4.

18.

The GMOseek matrix: a decision support tool for optimizing the detection of genetically modified plants.

Block A, Debode F, Grohmann L, Hulin J, Taverniers I, Kluga L, Barbau-Piednoir E, Broeders S, Huber I, Van den Bulcke M, Heinze P, Berben G, Busch U, Roosens N, Janssen E, Žel J, Gruden K, Morisset D.

BMC Bioinformatics. 2013 Aug 22;14:256. doi: 10.1186/1471-2105-14-256.

19.

Quantitative analysis of food and feed samples with droplet digital PCR.

Morisset D, Štebih D, Milavec M, Gruden K, Žel J.

PLoS One. 2013 May 2;8(5):e62583. doi: 10.1371/journal.pone.0062583. Print 2013.

20.

Isolation of small SSEA-4-positive putative stem cells from the ovarian surface epithelium of adult human ovaries by two different methods.

Virant-Klun I, Skutella T, Hren M, Gruden K, Cvjeticanin B, Vogler A, Sinkovec J.

Biomed Res Int. 2013;2013:690415. doi: 10.1155/2013/690415. Epub 2013 Feb 18.

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