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Items: 1 to 20 of 205

1.

Distinct Activities of Myf5 and MyoD Indicate Separate Roles in Skeletal Muscle Lineage Specification and Differentiation.

Conerly ML, Yao Z, Zhong JW, Groudine M, Tapscott SJ.

Dev Cell. 2016 Feb 22;36(4):375-85. doi: 10.1016/j.devcel.2016.01.021.

PMID:
26906734
2.

Prelamin A processing, accumulation and distribution in normal cells and laminopathy disorders.

Casasola A, Scalzo D, Nandakumar V, Halow J, Recillas-Targa F, Groudine M, Rincón-Arano H.

Nucleus. 2016 Mar;7(1):84-102. doi: 10.1080/19491034.2016.1150397.

PMID:
26900797
3.

The redundancy of the mammalian heterochromatic compartment.

Politz JC, Scalzo D, Groudine M.

Curr Opin Genet Dev. 2016 Apr;37:1-8. doi: 10.1016/j.gde.2015.10.007. Epub 2015 Dec 17. Review.

PMID:
26706451
4.

Olfactory receptor genes expressed in distinct lineages are sequestered in different nuclear compartments.

Yoon KH, Ragoczy T, Lu Z, Kondoh K, Kuang D, Groudine M, Buck LB.

Proc Natl Acad Sci U S A. 2015 May 5;112(18):E2403-9. doi: 10.1073/pnas.1506058112. Epub 2015 Apr 20.

5.

Wash interacts with lamin and affects global nuclear organization.

Verboon JM, Rincon-Arano H, Werwie TR, Delrow JJ, Scalzo D, Nandakumar V, Groudine M, Parkhurst SM.

Curr Biol. 2015 Mar 16;25(6):804-10. doi: 10.1016/j.cub.2015.01.052. Epub 2015 Mar 5.

6.

An acetyl-methyl switch drives a conformational change in p53.

Tong Q, Mazur SJ, Rincon-Arano H, Rothbart SB, Kuznetsov DM, Cui G, Liu WH, Gete Y, Klein BJ, Jenkins L, Mer G, Kutateladze AG, Strahl BD, Groudine M, Appella E, Kutateladze TG.

Structure. 2015 Feb 3;23(2):322-31. doi: 10.1016/j.str.2014.12.010.

7.

Functional redundancy in the nuclear compartmentalization of the late-replicating genome.

Ragoczy T, Telling A, Scalzo D, Kooperberg C, Groudine M.

Nucleus. 2014;5(6):626-35. doi: 10.4161/19491034.2014.990863.

8.

Nucleolar tethering mediates pairing between the IgH and Myc loci.

Strongin DE, Groudine M, Politz JC.

Nucleus. 2014 Sep-Oct;5(5):474-81. doi: 10.4161/nucl.36233.

9.

Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution.

Vierstra J, Rynes E, Sandstrom R, Zhang M, Canfield T, Hansen RS, Stehling-Sun S, Sabo PJ, Byron R, Humbert R, Thurman RE, Johnson AK, Vong S, Lee K, Bates D, Neri F, Diegel M, Giste E, Haugen E, Dunn D, Wilken MS, Josefowicz S, Samstein R, Chang KH, Eichler EE, De Bruijn M, Reh TA, Skoultchi A, Rudensky A, Orkin SH, Papayannopoulou T, Treuting PM, Selleri L, Kaul R, Groudine M, Bender MA, Stamatoyannopoulos JA.

Science. 2014 Nov 21;346(6212):1007-12. doi: 10.1126/science.1246426.

10.

Conservation of trans-acting circuitry during mammalian regulatory evolution.

Stergachis AB, Neph S, Sandstrom R, Haugen E, Reynolds AP, Zhang M, Byron R, Canfield T, Stelhing-Sun S, Lee K, Thurman RE, Vong S, Bates D, Neri F, Diegel M, Giste E, Dunn D, Vierstra J, Hansen RS, Johnson AK, Sabo PJ, Wilken MS, Reh TA, Treuting PM, Kaul R, Groudine M, Bender MA, Borenstein E, Stamatoyannopoulos JA.

Nature. 2014 Nov 20;515(7527):365-70. doi: 10.1038/nature13972.

11.

A comparative encyclopedia of DNA elements in the mouse genome.

Yue F, Cheng Y, Breschi A, Vierstra J, Wu W, Ryba T, Sandstrom R, Ma Z, Davis C, Pope BD, Shen Y, Pervouchine DD, Djebali S, Thurman RE, Kaul R, Rynes E, Kirilusha A, Marinov GK, Williams BA, Trout D, Amrhein H, Fisher-Aylor K, Antoshechkin I, DeSalvo G, See LH, Fastuca M, Drenkow J, Zaleski C, Dobin A, Prieto P, Lagarde J, Bussotti G, Tanzer A, Denas O, Li K, Bender MA, Zhang M, Byron R, Groudine MT, McCleary D, Pham L, Ye Z, Kuan S, Edsall L, Wu YC, Rasmussen MD, Bansal MS, Kellis M, Keller CA, Morrissey CS, Mishra T, Jain D, Dogan N, Harris RS, Cayting P, Kawli T, Boyle AP, Euskirchen G, Kundaje A, Lin S, Lin Y, Jansen C, Malladi VS, Cline MS, Erickson DT, Kirkup VM, Learned K, Sloan CA, Rosenbloom KR, Lacerda de Sousa B, Beal K, Pignatelli M, Flicek P, Lian J, Kahveci T, Lee D, Kent WJ, Ramalho Santos M, Herrero J, Notredame C, Johnson A, Vong S, Lee K, Bates D, Neri F, Diegel M, Canfield T, Sabo PJ, Wilken MS, Reh TA, Giste E, Shafer A, Kutyavin T, Haugen E, Dunn D, Reynolds AP, Neph S, Humbert R, Hansen RS, De Bruijn M, Selleri L, Rudensky A, Josefowicz S, Samstein R, Eichler EE, Orkin SH, Levasseur D, Papayannopoulou T, Chang KH, Skoultchi A, Gosh S, Disteche C, Treuting P, Wang Y, Weiss MJ, Blobel GA, Cao X, Zhong S, Wang T, Good PJ, Lowdon RF, Adams LB, Zhou XQ, Pazin MJ, Feingold EA, Wold B, Taylor J, Mortazavi A, Weissman SM, Stamatoyannopoulos JA, Snyder MP, Guigo R, Gingeras TR, Gilbert DM, Hardison RC, Beer MA, Ren B; Mouse ENCODE Consortium.

Nature. 2014 Nov 20;515(7527):355-64. doi: 10.1038/nature13992.

12.

The nucleosomal barrier to promoter escape by RNA polymerase II is overcome by the chromatin remodeler Chd1.

Skene PJ, Hernandez AE, Groudine M, Henikoff S.

Elife. 2014 Apr 15;3:e02042. doi: 10.7554/eLife.02042.

13.

The histone-H3K4-specific demethylase KDM5B binds to its substrate and product through distinct PHD fingers.

Klein BJ, Piao L, Xi Y, Rincon-Arano H, Rothbart SB, Peng D, Wen H, Larson C, Zhang X, Zheng X, Cortazar MA, Peña PV, Mangan A, Bentley DL, Strahl BD, Groudine M, Li W, Shi X, Kutateladze TG.

Cell Rep. 2014 Jan 30;6(2):325-35. doi: 10.1016/j.celrep.2013.12.021. Epub 2014 Jan 9.

14.

Something silent this way forms: the functional organization of the repressive nuclear compartment.

Politz JC, Scalzo D, Groudine M.

Annu Rev Cell Dev Biol. 2013;29:241-70. doi: 10.1146/annurev-cellbio-101512-122317. Epub 2013 Jul 5. Review.

15.

Dido3 PHD modulates cell differentiation and division.

Gatchalian J, Fütterer A, Rothbart SB, Tong Q, Rincon-Arano H, Sánchez de Diego A, Groudine M, Strahl BD, Martínez-A C, van Wely KH, Kutateladze TG.

Cell Rep. 2013 Jul 11;4(1):148-58. doi: 10.1016/j.celrep.2013.06.014. Epub 2013 Jul 3.

16.

Molecular basis for chromatin binding and regulation of MLL5.

Ali M, Rincón-Arano H, Zhao W, Rothbart SB, Tong Q, Parkhurst SM, Strahl BD, Deng LW, Groudine M, Kutateladze TG.

Proc Natl Acad Sci U S A. 2013 Jul 9;110(28):11296-301. doi: 10.1073/pnas.1310156110. Epub 2013 Jun 24.

17.

When untethered, something silent inside comes.

Politz JC, Ragoczy T, Groudine M.

Nucleus. 2013 May-Jun;4(3):153-5. doi: 10.4161/nucl.24999. Epub 2013 May 15.

18.

UpSET-ting the balance: modulating open chromatin features in metazoan genomes.

Rincon-Arano H, Parkhurst SM, Groudine M.

Fly (Austin). 2013 Jul-Sep;7(3):153-60. doi: 10.4161/fly.24732. Epub 2013 May 6.

19.

UpSET recruits HDAC complexes and restricts chromatin accessibility and acetylation at promoter regions.

Rincon-Arano H, Halow J, Delrow JJ, Parkhurst SM, Groudine M.

Cell. 2012 Dec 7;151(6):1214-28. doi: 10.1016/j.cell.2012.11.009. Epub 2012 Nov 21.

20.

An expansive human regulatory lexicon encoded in transcription factor footprints.

Neph S, Vierstra J, Stergachis AB, Reynolds AP, Haugen E, Vernot B, Thurman RE, John S, Sandstrom R, Johnson AK, Maurano MT, Humbert R, Rynes E, Wang H, Vong S, Lee K, Bates D, Diegel M, Roach V, Dunn D, Neri J, Schafer A, Hansen RS, Kutyavin T, Giste E, Weaver M, Canfield T, Sabo P, Zhang M, Balasundaram G, Byron R, MacCoss MJ, Akey JM, Bender MA, Groudine M, Kaul R, Stamatoyannopoulos JA.

Nature. 2012 Sep 6;489(7414):83-90. doi: 10.1038/nature11212.

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