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Molecular biology of Archaea.

Prangishvili D, Forterre P, Franzetti B, Gribaldo S.

Biochimie. 2015 Sep 21. pii: S0300-9084(15)00295-3. doi: 10.1016/j.biochi.2015.09.020. [Epub ahead of print] No abstract available.


Paenibacillus faecis sp. nov., isolated from human faeces.

Clermont D, Gomard M, Hamon S, Bonne I, Fernandez JC, Wheeler R, Malosse C, Chamot-Rooke J, Gribaldo S, Gomperts Boneca I, Bizet C.

Int J Syst Evol Microbiol. 2015 Sep 18. doi: 10.1099/ijsem.0.000622. [Epub ahead of print]


The Flagellar Arginine Kinase in Trypanosoma brucei Is Important for Infection in Tsetse Flies.

Ooi CP, Rotureau B, Gribaldo S, Georgikou C, Julkowska D, Blisnick T, Perrot S, Subota I, Bastin P.

PLoS One. 2015 Jul 28;10(7):e0133676. doi: 10.1371/journal.pone.0133676. eCollection 2015.


S-layers at second glance? Altiarchaeal grappling hooks (hami) resemble archaeal S-layer proteins in structure and sequence.

Perras AK, Daum B, Ziegler C, Takahashi LK, Ahmed M, Wanner G, Klingl A, Leitinger G, Kolb-Lenz D, Gribaldo S, Auerbach A, Mora M, Probst AJ, Bellack A, Moissl-Eichinger C.

Front Microbiol. 2015 Jun 9;6:543. doi: 10.3389/fmicb.2015.00543. eCollection 2015.


The two-domain tree of life is linked to a new root for the Archaea.

Raymann K, Brochier-Armanet C, Gribaldo S.

Proc Natl Acad Sci U S A. 2015 May 26;112(21):6670-5. doi: 10.1073/pnas.1420858112. Epub 2015 May 11.


Corrigendum to "unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette".

Borrel G, Gaci N, Peyret P, O'Toole PW, Gribaldo S, Brugère JF.

Archaea. 2015 Feb 2;2015:941836. doi: 10.1155/2015/941836. eCollection 2015.


Biology of a widespread uncultivated archaeon that contributes to carbon fixation in the subsurface.

Probst AJ, Weinmaier T, Raymann K, Perras A, Emerson JB, Rattei T, Wanner G, Klingl A, Berg IA, Yoshinaga M, Viehweger B, Hinrichs KU, Thomas BC, Meck S, Auerbach AK, Heise M, Schintlmeister A, Schmid M, Wagner M, Gribaldo S, Banfield JF, Moissl-Eichinger C.

Nat Commun. 2014 Nov 26;5:5497. doi: 10.1038/ncomms6497.


Toward more accurate ancestral protein genotype-phenotype reconstructions with the use of species tree-aware gene trees.

Groussin M, Hobbs JK, Szöllősi GJ, Gribaldo S, Arcus VL, Gouy M.

Mol Biol Evol. 2015 Jan;32(1):13-22. doi: 10.1093/molbev/msu305. Epub 2014 Nov 4.


Comparative analyses of Legionella species identifies genetic features of strains causing Legionnaires' disease.

Gomez-Valero L, Rusniok C, Rolando M, Neou M, Dervins-Ravault D, Demirtas J, Rouy Z, Moore RJ, Chen H, Petty NK, Jarraud S, Etienne J, Steinert M, Heuner K, Gribaldo S, Médigue C, Glöckner G, Hartland EL, Buchrieser C.

Genome Biol. 2014;15(11):505.


The TET2 and TET3 aminopeptidases from Pyrococcus horikoshii form a hetero-subunit peptidasome with enhanced peptide destruction properties.

Appolaire A, Durá MA, Ferruit M, Andrieu JP, Godfroy A, Gribaldo S, Franzetti B.

Mol Microbiol. 2014 Nov;94(4):803-14. doi: 10.1111/mmi.12775. Epub 2014 Oct 7.


Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine.

Borrel G, Parisot N, Harris HM, Peyretaillade E, Gaci N, Tottey W, Bardot O, Raymann K, Gribaldo S, Peyret P, O'Toole PW, Brugère JF.

BMC Genomics. 2014 Aug 13;15:679. doi: 10.1186/1471-2164-15-679.


Eukaryotic origins: How and when was the mitochondrion acquired?

Poole AM, Gribaldo S.

Cold Spring Harb Perspect Biol. 2014 Jul 18;6(12):a015990. doi: 10.1101/cshperspect.a015990. Review.


Deciphering the role of the chitin synthase families 1 and 2 in the in vivo and in vitro growth of Aspergillus fumigatus by multiple gene targeting deletion.

Muszkieta L, Aimanianda V, Mellado E, Gribaldo S, Alcàzar-Fuoli L, Szewczyk E, Prevost MC, Latgé JP.

Cell Microbiol. 2014 Dec;16(12):1784-805. doi: 10.1111/cmi.12326. Epub 2014 Aug 15.


Unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette.

Borrel G, Gaci N, Peyret P, O'Toole PW, Gribaldo S, Brugère JF.

Archaea. 2014 Jan 27;2014:374146. doi: 10.1155/2014/374146. eCollection 2014. Erratum in: Archaea. 2015;2015:941836.


Global phylogenomic analysis disentangles the complex evolutionary history of DNA replication in archaea.

Raymann K, Forterre P, Brochier-Armanet C, Gribaldo S.

Genome Biol Evol. 2014 Jan;6(1):192-212. doi: 10.1093/gbe/evu004.


Phylogenomic data support a seventh order of Methylotrophic methanogens and provide insights into the evolution of Methanogenesis.

Borrel G, O'Toole PW, Harris HM, Peyret P, Brugère JF, Gribaldo S.

Genome Biol Evol. 2013;5(10):1769-80. doi: 10.1093/gbe/evt128.


Genome Sequence of "Candidatus Methanomassiliicoccus intestinalis" Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon from Human Feces.

Borrel G, Harris HM, Parisot N, Gaci N, Tottey W, Mihajlovski A, Deane J, Gribaldo S, Bardot O, Peyretaillade E, Peyret P, O'Toole PW, Brugère JF.

Genome Announc. 2013 Jul 11;1(4). pii: e00453-13. doi: 10.1128/genomeA.00453-13.


A genomic survey of Reb homologs suggests widespread occurrence of R-bodies in proteobacteria.

Raymann K, Bobay LM, Doak TG, Lynch M, Gribaldo S.

G3 (Bethesda). 2013 Mar;3(3):505-16. doi: 10.1534/g3.112.005231. Epub 2013 Mar 1.


Genome sequence of "Candidatus Methanomethylophilus alvus" Mx1201, a methanogenic archaeon from the human gut belonging to a seventh order of methanogens.

Borrel G, Harris HM, Tottey W, Mihajlovski A, Parisot N, Peyretaillade E, Peyret P, Gribaldo S, O'Toole PW, Brugère JF.

J Bacteriol. 2012 Dec;194(24):6944-5. doi: 10.1128/JB.01867-12.


Time for order in microbial systematics.

Gribaldo S, Brochier-Armanet C.

Trends Microbiol. 2012 May;20(5):209-10. doi: 10.1016/j.tim.2012.02.006. Epub 2012 Mar 20. No abstract available.

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