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Items: 4

1. a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium.

Wang J, Zhuang J, Iyer S, Lin XY, Greven MC, Kim BH, Moore J, Pierce BG, Dong X, Virgil D, Birney E, Hung JH, Weng Z.

Nucleic Acids Res. 2013 Jan;41(Database issue):D171-6. doi: 10.1093/nar/gks1221. Epub 2012 Nov 29.


Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors.

Wang J, Zhuang J, Iyer S, Lin X, Whitfield TW, Greven MC, Pierce BG, Dong X, Kundaje A, Cheng Y, Rando OJ, Birney E, Myers RM, Noble WS, Snyder M, Weng Z.

Genome Res. 2012 Sep;22(9):1798-812. doi: 10.1101/gr.139105.112.


Modeling gene expression using chromatin features in various cellular contexts.

Dong X, Greven MC, Kundaje A, Djebali S, Brown JB, Cheng C, Gingeras TR, Gerstein M, Guigó R, Birney E, Weng Z.

Genome Biol. 2012 Jun 13;13(9):R53. doi: 10.1186/gb-2012-13-9-r53.


Quantitative analysis of promoter methylation in exfoliated epithelial cells isolated from breast milk of healthy women.

Wong CM, Anderton DL, Smith-Schneider S, Wing MA, Greven MC, Arcaro KF.

Epigenetics. 2010 Oct 1;5(7):645-55. doi: 10.4161/epi.5.7.12961. Epub 2010 Oct 1.

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