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Results: 1 to 20 of 421


DGEclust: differential expression analysis of clustered count data.

Vavoulis DV, Francescatto M, Heutink P, Gough J.

Genome Biol. 2015 Feb 20;16(1):39. doi: 10.1186/s13059-015-0604-6.


Release of proteins and enzymes from vesicular compartments by alternating magnetic fields.

Booth A, Pintre IC, Lin Y, Gough JE, Webb SJ.

Phys Chem Chem Phys. 2015 Mar 18. [Epub ahead of print]


Restoration of chondrocytic phenotype on a two-dimensional micropatterned surface.

Zhou M, Yuan X, Yin H, Gough JE.

Biointerphases. 2015 Mar 26;10(1):011003. doi: 10.1116/1.4913565.


Feedback network models for quantum transport.

Gough J.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Dec;90(6):062109. Epub 2014 Dec 3.


An integrative approach to predicting the functional effects of non-coding and coding sequence variation.

Shihab HA, Rogers MF, Gough J, Mort M, Cooper DN, Day IN, Gaunt TR, Campbell C.

Bioinformatics. 2015 Jan 11. pii: btv009. [Epub ahead of print]


The InterPro protein families database: the classification resource after 15 years.

Mitchell A, Chang HY, Daugherty L, Fraser M, Hunter S, Lopez R, McAnulla C, McMenamin C, Nuka G, Pesseat S, Sangrador-Vegas A, Scheremetjew M, Rato C, Yong SY, Bateman A, Punta M, Attwood TK, Sigrist CJ, Redaschi N, Rivoire C, Xenarios I, Kahn D, Guyot D, Bork P, Letunic I, Gough J, Oates M, Haft D, Huang H, Natale DA, Wu CH, Orengo C, Sillitoe I, Mi H, Thomas PD, Finn RD.

Nucleic Acids Res. 2015 Jan;43(Database issue):D213-21. doi: 10.1093/nar/gku1243. Epub 2014 Nov 26.


The SUPERFAMILY 1.75 database in 2014: a doubling of data.

Oates ME, Stahlhacke J, Vavoulis DV, Smithers B, Rackham OJ, Sardar AJ, Zaucha J, Thurlby N, Fang H, Gough J.

Nucleic Acids Res. 2015 Jan;43(Database issue):D227-33. doi: 10.1093/nar/gku1041. Epub 2014 Nov 20.


Human osteoblasts within soft peptide hydrogels promote mineralisation in vitro.

Castillo Diaz LA, Saiani A, Gough JE, Miller AF.

J Tissue Eng. 2014 Jul 2;5:2041731414539344. doi: 10.1177/2041731414539344. eCollection 2014.


Pathology and Virus Distribution in the Lung and Lymphoid Tissues of Pigs Experimentally Inoculated with Three Distinct Type 1 PRRS Virus Isolates of Varying Pathogenicity.

Morgan SB, Frossard JP, Pallares FJ, Gough J, Stadejek T, Graham SP, Steinbach F, Drew TW, Salguero FJ.

Transbound Emerg Dis. 2014 Nov 10. doi: 10.1111/tbed.12272. [Epub ahead of print]


Genome3D: exploiting structure to help users understand their sequences.

Lewis TE, Sillitoe I, Andreeva A, Blundell TL, Buchan DW, Chothia C, Cozzetto D, Dana JM, Filippis I, Gough J, Jones DT, Kelley LA, Kleywegt GJ, Minneci F, Mistry J, Murzin AG, Ochoa-MontaƱo B, Oates ME, Punta M, Rackham OJ, Stahlhacke J, Sternberg MJ, Velankar S, Orengo C.

Nucleic Acids Res. 2015 Jan;43(Database issue):D382-6. doi: 10.1093/nar/gku973. Epub 2014 Oct 27.


A proteome quality index.

Zaucha J, Stahlhacke J, Oates ME, Thurlby N, Rackham OJ, Fang H, Smithers B, Gough J.

Environ Microbiol. 2015 Jan;17(1):4-9. doi: 10.1111/1462-2920.12622. Epub 2014 Oct 22.


Characterisation of a K390R ITK kinase dead transgenic mouse--implications for ITK as a therapeutic target.

Deakin A, Duddy G, Wilson S, Harrison S, Latcham J, Fulleylove M, Fung S, Smith J, Pedrick M, McKevitt T, Felton L, Morley J, Quint D, Fattah D, Hayes B, Gough J, Solari R.

PLoS One. 2014 Sep 24;9(9):e107490. doi: 10.1371/journal.pone.0107490. eCollection 2014.


The 'dnet' approach promotes emerging research on cancer patient survival.

Fang H, Gough J.

Genome Med. 2014 Aug 26;6(8):64. doi: 10.1186/s13073-014-0064-8. eCollection 2014.


Structured and disordered facets of the GPCR fold.

Venkatakrishnan AJ, Flock T, Prado DE, Oates ME, Gough J, Madan Babu M.

Curr Opin Struct Biol. 2014 Aug;27:129-37. doi: 10.1016/ Epub 2014 Sep 3.


Sequential transcriptional changes dictate safe and effective antigen-specific immunotherapy.

Burton BR, Britton GJ, Fang H, Verhagen J, Smithers B, Sabatos-Peyton CA, Carney LJ, Gough J, Strobel S, Wraith DC.

Nat Commun. 2014 Sep 3;5:4741. doi: 10.1038/ncomms5741.


Ranking non-synonymous single nucleotide polymorphisms based on disease concepts.

Shihab HA, Gough J, Mort M, Cooper DN, Day IN, Gaunt TR.

Hum Genomics. 2014 Jun 30;8:11. doi: 10.1186/1479-7364-8-11.


Enzymatically triggered peptide hydrogels for 3D cell encapsulation and culture.

Szkolar L, Guilbaud JB, Miller AF, Gough JE, Saiani A.

J Pept Sci. 2014 Jul;20(7):578-84. doi: 10.1002/psc.2666. Epub 2014 Jun 12.


Extracellular matrix formation in self-assembled minimalistic bioactive hydrogels based on aromatic peptide amphiphiles.

Zhou M, Ulijn RV, Gough JE.

J Tissue Eng. 2014 Apr 15;5:2041731414531593. doi: 10.1177/2041731414531593. eCollection 2014.


Uniaxial cyclic strain of human adipose-derived mesenchymal stem cells and C2C12 myoblasts in coculture.

Dugan JM, Cartmell SH, Gough JE.

J Tissue Eng. 2014 Mar 27;5:2041731414530138. doi: 10.1177/2041731414530138. eCollection 2014.


Classification of intrinsically disordered regions and proteins.

van der Lee R, Buljan M, Lang B, Weatheritt RJ, Daughdrill GW, Dunker AK, Fuxreiter M, Gough J, Gsponer J, Jones DT, Kim PM, Kriwacki RW, Oldfield CJ, Pappu RV, Tompa P, Uversky VN, Wright PE, Babu MM.

Chem Rev. 2014 Jul 9;114(13):6589-631. doi: 10.1021/cr400525m. Epub 2014 Apr 29. No abstract available.

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