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Results: 1 to 20 of 188

1.

Comparison of data acquisition strategies on quadrupole ion trap instrumentation for shotgun proteomics.

Canterbury JD, Merrihew GE, MacCoss MJ, Goodlett DR, Shaffer SA.

J Am Soc Mass Spectrom. 2014 Dec;25(12):2048-59. doi: 10.1007/s13361-014-0981-1. Epub 2014 Sep 27.

PMID:
25261218
[PubMed - in process]
2.

Phosphorylation within the cysteine-rich region of dystrophin enhances its association with β-dystroglycan and identifies a potential novel therapeutic target for skeletal muscle wasting.

Swiderski K, Shaffer SA, Gallis B, Odom GL, Arnett AL, Scott Edgar J, Baum DM, Chee A, Naim T, Gregorevic P, Murphy KT, Moody J, Goodlett DR, Lynch GS, Chamberlain JS.

Hum Mol Genet. 2014 Dec 20;23(25):6697-711. doi: 10.1093/hmg/ddu388. Epub 2014 Jul 31.

PMID:
25082828
[PubMed - in process]
3.

A type VI secretion-related pathway in Bacteroidetes mediates interbacterial antagonism.

Russell AB, Wexler AG, Harding BN, Whitney JC, Bohn AJ, Goo YA, Tran BQ, Barry NA, Zheng H, Peterson SB, Chou S, Gonen T, Goodlett DR, Goodman AL, Mougous JD.

Cell Host Microbe. 2014 Aug 13;16(2):227-36. doi: 10.1016/j.chom.2014.07.007. Epub 2014 Jul 25.

PMID:
25070807
[PubMed - in process]
4.

Shotgun MS proteomic analysis of bronchoalveolar lavage fluid in normal subjects.

Nguyen EV, Gharib SA, Schnapp LM, Goodlett DR.

Proteomics Clin Appl. 2014 Oct;8(9-10):737-47. doi: 10.1002/prca.201300018.

PMID:
24616423
[PubMed - in process]
5.

Identification and characterization of a drug-sensitive strain enables puromycin-based translational assays in Saccharomyces cerevisiae.

Cary GA, Yoon SH, Torres CG, Wang K, Hays M, Ludlow C, Goodlett DR, Dudley AM.

Yeast. 2014 May;31(5):167-78. doi: 10.1002/yea.3007. Epub 2014 Mar 19.

PMID:
24610064
[PubMed - indexed for MEDLINE]
6.

Genetically distinct pathways guide effector export through the type VI secretion system.

Whitney JC, Beck CM, Goo YA, Russell AB, Harding BN, De Leon JA, Cunningham DA, Tran BQ, Low DA, Goodlett DR, Hayes CS, Mougous JD.

Mol Microbiol. 2014 May;92(3):529-42. doi: 10.1111/mmi.12571. Epub 2014 Mar 28.

PMID:
24589350
[PubMed - indexed for MEDLINE]
7.

Quantitative glycoproteomics analysis reveals changes in N-glycosylation level associated with pancreatic ductal adenocarcinoma.

Pan S, Chen R, Tamura Y, Crispin DA, Lai LA, May DH, McIntosh MW, Goodlett DR, Brentnall TA.

J Proteome Res. 2014 Mar 7;13(3):1293-306. doi: 10.1021/pr4010184. Epub 2014 Jan 28.

PMID:
24471499
[PubMed - indexed for MEDLINE]
8.

VgrG-5 is a Burkholderia type VI secretion system-exported protein required for multinucleated giant cell formation and virulence.

Schwarz S, Singh P, Robertson JD, LeRoux M, Skerrett SJ, Goodlett DR, West TE, Mougous JD.

Infect Immun. 2014 Apr;82(4):1445-52. doi: 10.1128/IAI.01368-13. Epub 2014 Jan 22.

PMID:
24452686
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Bioengineering radioresistance by overproduction of RPA, a mammalian-type single-stranded DNA-binding protein, in a halophilic archaeon.

Karan R, DasSarma P, Balcer-Kubiczek E, Weng RR, Liao CC, Goodlett DR, Ng WV, Dassarma S.

Appl Microbiol Biotechnol. 2014 Feb;98(4):1737-47. doi: 10.1007/s00253-013-5368-x. Epub 2013 Nov 29.

PMID:
24292079
[PubMed - indexed for MEDLINE]
10.

A divergent Pseudomonas aeruginosa palmitoyltransferase essential for cystic fibrosis-specific lipid A.

Thaipisuttikul I, Hittle LE, Chandra R, Zangari D, Dixon CL, Garrett TA, Rasko DA, Dasgupta N, Moskowitz SM, Malmström L, Goodlett DR, Miller SI, Bishop RE, Ernst RK.

Mol Microbiol. 2014 Jan;91(1):158-74. doi: 10.1111/mmi.12451. Epub 2013 Nov 27.

PMID:
24283944
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Multiplexed and data-independent tandem mass spectrometry for global proteome profiling.

Chapman JD, Goodlett DR, Masselon CD.

Mass Spectrom Rev. 2014 Nov-Dec;33(6):452-70. doi: 10.1002/mas.21400. Epub 2013 Nov 26.

PMID:
24281846
[PubMed - in process]
12.

Proteomic landscape of bronchoalveolar lavage fluid in human immunodeficiency virus infection.

Nguyen EV, Gharib SA, Crothers K, Chow YH, Park DR, Goodlett DR, Schnapp LM.

Am J Physiol Lung Cell Mol Physiol. 2014 Jan 1;306(1):L35-42. doi: 10.1152/ajplung.00140.2013. Epub 2013 Nov 8.

PMID:
24213920
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Diatom proteomics reveals unique acclimation strategies to mitigate Fe limitation.

Nunn BL, Faux JF, Hippmann AA, Maldonado MT, Harvey HR, Goodlett DR, Boyd PW, Strzepek RF.

PLoS One. 2013 Oct 16;8(10):e75653. doi: 10.1371/journal.pone.0075653. eCollection 2013.

PMID:
24146769
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Large precursor tolerance database search - a simple approach for estimation of the amount of spectra with precursor mass shifts in proteomic data.

Weng RR, Chu LJ, Shu HW, Wu TH, Chen MC, Chang Y, Tsai YS, Wilson MC, Tsay YG, Goodlett DR, Ng WV.

J Proteomics. 2013 Oct 8;91:375-84. doi: 10.1016/j.jprot.2013.07.030. Epub 2013 Aug 8.

PMID:
23933159
[PubMed - indexed for MEDLINE]
Free Article
15.

Sulfur oxidizers dominate carbon fixation at a biogeochemical hot spot in the dark ocean.

Mattes TE, Nunn BL, Marshall KT, Proskurowski G, Kelley DS, Kawka OE, Goodlett DR, Hansell DA, Morris RM.

ISME J. 2013 Dec;7(12):2349-60. doi: 10.1038/ismej.2013.113. Epub 2013 Jul 11.

PMID:
23842654
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A statistical approach to peptide identification from clustered tandem mass spectrometry data.

Ryu S, Goodlett DR, Noble WS, Minin VN.

Proceedings (IEEE Int Conf Bioinformatics Biomed). 2012 Oct 4:648-653.

PMID:
23828149
[PubMed]
Free PMC Article
17.

A pseudo-atomic model for the capsid shell of bacteriophage lambda using chemical cross-linking/mass spectrometry and molecular modeling.

Singh P, Nakatani E, Goodlett DR, Catalano CE.

J Mol Biol. 2013 Sep 23;425(18):3378-88. doi: 10.1016/j.jmb.2013.06.026. Epub 2013 Jun 25.

PMID:
23811054
[PubMed - indexed for MEDLINE]
18.

Proteomic profiling of bronchoalveolar lavage fluid in critically ill patients with ventilator-associated pneumonia.

Nguyen EV, Gharib SA, Palazzo SJ, Chow YH, Goodlett DR, Schnapp LM.

PLoS One. 2013;8(3):e58782. doi: 10.1371/journal.pone.0058782. Epub 2013 Mar 7.

PMID:
23505561
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Mapping PARP-1 auto-ADP-ribosylation sites by liquid chromatography-tandem mass spectrometry.

Chapman JD, Gagné JP, Poirier GG, Goodlett DR.

J Proteome Res. 2013 Apr 5;12(4):1868-80. doi: 10.1021/pr301219h. Epub 2013 Mar 18.

PMID:
23438649
[PubMed - indexed for MEDLINE]
20.

Global analysis of condition-specific subcellular protein distribution and abundance.

Jung S, Smith JJ, von Haller PD, Dilworth DJ, Sitko KA, Miller LR, Saleem RA, Goodlett DR, Aitchison JD.

Mol Cell Proteomics. 2013 May;12(5):1421-35. doi: 10.1074/mcp.O112.019166. Epub 2013 Jan 24.

PMID:
23349476
[PubMed - indexed for MEDLINE]
Free PMC Article
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