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Virulence gene profiles and clonal relationships of Escherichia coli O26:H11 isolates from feedlot cattle by whole genome sequencing.

Gonzalez-Escalona N, Toro M, Rump LV, Cao G, Nagaraja TG, Meng J.

Appl Environ Microbiol. 2016 Apr 22. pii: AEM.00498-16. [Epub ahead of print]


A non-autochthonous US strain of Vibrio parahaemolyticus isolated from Chesapeake Bay oysters caused the outbreak in Maryland in 2010.

Haendiges J, Jones J, Myers RA, Mitchell CS, Butler E, Toro M, Gonzalez-Escalona N.

Appl Environ Microbiol. 2016 Mar 18. pii: AEM.00096-16. [Epub ahead of print]


Draft Genome Sequences of Four Xanthomonas arboricola pv. juglandis Strains Associated with Walnut Blight in Chile.

Higuera G, González-Escalona N, Véliz C, Vera F, Romero J.

Genome Announc. 2015 Oct 8;3(5). pii: e01160-15. doi: 10.1128/genomeA.01160-15.


Genome Sequences of 64 Non-O157:H7 Shiga Toxin-Producing Escherichia coli Strains.

Toro M, Cao G, Rump L, Nagaraja TG, Meng J, Gonzalez-Escalona N.

Genome Announc. 2015 Oct 1;3(5). pii: e01067-15. doi: 10.1128/genomeA.01067-15.


Simultaneous Presence of Insertion Sequence Excision Enhancer and Insertion Sequence IS629 Correlates with Increased Diversity and Virulence in Shiga Toxin-Producing Escherichia coli.

Toro M, Rump LV, Cao G, Meng J, Brown EW, Gonzalez-Escalona N.

J Clin Microbiol. 2015 Nov;53(11):3466-73. doi: 10.1128/JCM.01349-15. Epub 2015 Aug 19.


Examination of clinical and environmental Vibrio parahaemolyticus isolates by multi-locus sequence typing (MLST) and multiple-locus variable-number tandem-repeat analysis (MLVA).

Lüdeke CH, Gonzalez-Escalona N, Fischer M, Jones JL.

Front Microbiol. 2015 Jun 10;6:564. doi: 10.3389/fmicb.2015.00564. eCollection 2015.


Tracing Origins of the Salmonella Bareilly Strain Causing a Food-borne Outbreak in the United States.

Hoffmann M, Luo Y, Monday SR, Gonzalez-Escalona N, Ottesen AR, Muruvanda T, Wang C, Kastanis G, Keys C, Janies D, Senturk IF, Catalyurek UV, Wang H, Hammack TS, Wolfgang WJ, Schoonmaker-Bopp D, Chu A, Myers R, Haendiges J, Evans PS, Meng J, Strain EA, Allard MW, Brown EW.

J Infect Dis. 2016 Feb 15;213(4):502-8. doi: 10.1093/infdis/jiv297. Epub 2015 May 20.


Draft Genome Sequences of 33 Salmonella enterica Clinical and Wildlife Isolates from Chile.

Toro M, Retamal P, Allard M, Brown EW, Evans P, Gonzalez-Escalona N.

Genome Announc. 2015 Mar 19;3(2). pii: e00054-15. doi: 10.1128/genomeA.00054-15.


Characterization of Vibrio parahaemolyticus clinical strains from Maryland (2012-2013) and comparisons to a locally and globally diverse V. parahaemolyticus strains by whole-genome sequence analysis.

Haendiges J, Timme R, Allard MW, Myers RA, Brown EW, Gonzalez-Escalona N.

Front Microbiol. 2015 Feb 19;6:125. doi: 10.3389/fmicb.2015.00125. eCollection 2015.


Transoceanic spreading of pathogenic strains of Vibrio parahaemolyticus with distinctive genetic signatures in the recA gene.

González-Escalona N, Gavilan RG, Brown EW, Martinez-Urtaza J.

PLoS One. 2015 Feb 13;10(2):e0117485. doi: 10.1371/journal.pone.0117485. eCollection 2015.


Draft Genome Sequence of Bivalent Clostridium botulinum Strain IBCA10-7060, Encoding Botulinum Neurotoxin B and a New FA Mosaic Type.

Gonzalez-Escalona N, Thirunavukkarasu N, Singh A, Toro M, Brown EW, Zink D, Rummel A, Sharma SK.

Genome Announc. 2014 Dec 11;2(6). pii: e01275-14. doi: 10.1128/genomeA.01275-14.


Evaluation and comparison of rapid methods for the detection of Salmonella in naturally contaminated pine nuts using different pre enrichment media.

Wang H, Gill VS, Cheng CM, Gonzalez-Escalona N, Irvin KA, Zheng J, Bell RL, Jacobson AP, Hammack TS.

Food Microbiol. 2015 Apr;46:58-65. doi: 10.1016/ Epub 2014 Jul 22.


Genomic diversity and virulence profiles of historical Escherichia coli O157 strains isolated from clinical and environmental sources.

Rump LV, Gonzalez-Escalona N, Ju W, Wang F, Cao G, Meng S, Meng J.

Appl Environ Microbiol. 2015 Jan;81(2):569-77. doi: 10.1128/AEM.02616-14. Epub 2014 Nov 7.


An evaluation of alternative methods for constructing phylogenies from whole genome sequence data: a case study with Salmonella.

Pettengill JB, Luo Y, Davis S, Chen Y, Gonzalez-Escalona N, Ottesen A, Rand H, Allard MW, Strain E.

PeerJ. 2014 Oct 14;2:e620. doi: 10.7717/peerj.620. eCollection 2014.


Draft Genome Sequences of Clinical Vibrio parahaemolyticus Strains Isolated in Maryland (2010 to 2013).

Haendiges J, Timme R, Allard M, Myers RA, Payne J, Brown EW, Evans P, Gonzalez-Escalona N.

Genome Announc. 2014 Aug 7;2(4). pii: e00776-14. doi: 10.1128/genomeA.00776-14.


Pandemic Vibrio parahaemolyticus, Maryland, USA, 2012.

Haendiges J, Rock M, Myers RA, Brown EW, Evans P, Gonzalez-Escalona N.

Emerg Infect Dis. 2014 Apr;20(4):718-20. doi: 10.3201/eid2004.130818. No abstract available.


Whole-genome single-nucleotide-polymorphism analysis for discrimination of Clostridium botulinum group I strains.

Gonzalez-Escalona N, Timme R, Raphael BH, Zink D, Sharma SK.

Appl Environ Microbiol. 2014 Apr;80(7):2125-32. doi: 10.1128/AEM.03934-13. Epub 2014 Jan 24.


Genetic characterization of trh positive Vibrio spp. isolated from Norway.

Ellingsen AB, Olsen JS, Granum PE, Rørvik LM, González-Escalona N.

Front Cell Infect Microbiol. 2013 Dec 25;3:107. doi: 10.3389/fcimb.2013.00107. eCollection 2013.


Draft Genome Sequences of Two Salmonella Strains from the SARA Collection, SARA64 (Muenchen) and SARA33 (Heidelberg), Provide Insight into Their Antibiotic Resistance.

Kroft BS, Brown EW, Meng J, Gonzalez-Escalona N.

Genome Announc. 2013 Oct 3;1(5). pii: e00806-13. doi: 10.1128/genomeA.00806-13.


Draft Genome Sequences of Two O104:H21 Escherichia coli Isolates Causing Hemorrhagic Colitis during a 1994 Montana Outbreak Provide Insight into Their Pathogenicity.

Gonzalez-Escalona N, McFarland MA, Rump LV, Payne J, Andrzejewski D, Brown EW, Evans PS, Croley TR.

Genome Announc. 2013 Oct 3;1(5). pii: e00805-13. doi: 10.1128/genomeA.00805-13.

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