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Results: 9

1.

The fundamental tradeoff in genomes and proteomes of prokaryotes established by the genetic code, codon entropy, and physics of nucleic acids and proteins.

Goncearenco A, Berezovsky IN.

Biol Direct. 2014 Dec 12;9(1):29. [Epub ahead of print]

PMID:
25496919
[PubMed - as supplied by publisher]
Free Article
2.

Coverage of protein domain families with structural protein-protein interactions: Current progress and future trends.

Goncearenco A, Shoemaker BA, Zhang D, Sarychev A, Panchenko AR.

Prog Biophys Mol Biol. 2014 Nov-Dec;116(2-3):187-93. doi: 10.1016/j.pbiomolbio.2014.05.005. Epub 2014 Jun 13.

PMID:
24931138
[PubMed - in process]
3.

Molecular mechanisms of adaptation emerging from the physics and evolution of nucleic acids and proteins.

Goncearenco A, Ma BG, Berezovsky IN.

Nucleic Acids Res. 2014 Mar;42(5):2879-92. doi: 10.1093/nar/gkt1336. Epub 2013 Dec 25.

PMID:
24371267
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

SPACER: Server for predicting allosteric communication and effects of regulation.

Goncearenco A, Mitternacht S, Yong T, Eisenhaber B, Eisenhaber F, Berezovsky IN.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W266-72. doi: 10.1093/nar/gkt460. Epub 2013 Jun 3.

PMID:
23737445
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

A dominant negative heterozygous G87R mutation in the zinc transporter, ZnT-2 (SLC30A2), results in transient neonatal zinc deficiency.

Lasry I, Seo YA, Ityel H, Shalva N, Pode-Shakked B, Glaser F, Berman B, Berezovsky I, Goncearenco A, Klar A, Levy J, Anikster Y, Kelleher SL, Assaraf YG.

J Biol Chem. 2012 Aug 24;287(35):29348-61. doi: 10.1074/jbc.M112.368159. Epub 2012 Jun 25.

PMID:
22733820
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Exploring the evolution of protein function in Archaea.

Goncearenco A, Berezovsky IN.

BMC Evol Biol. 2012 May 30;12:75.

PMID:
22646318
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Computational reconstruction of primordial prototypes of elementary functional loops in modern proteins.

Goncearenco A, Berezovsky IN.

Bioinformatics. 2011 Sep 1;27(17):2368-75. doi: 10.1093/bioinformatics/btr396. Epub 2011 Jun 30.

PMID:
21724592
[PubMed - indexed for MEDLINE]
Free Article
8.

Prototypes of elementary functional loops unravel evolutionary connections between protein functions.

Goncearenco A, Berezovsky IN.

Bioinformatics. 2010 Sep 15;26(18):i497-503. doi: 10.1093/bioinformatics/btq374.

PMID:
20823313
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Thermophilic adaptation of protein complexes inferred from proteomic homology modeling.

Ma BG, Goncearenco A, Berezovsky IN.

Structure. 2010 Jul 14;18(7):819-28. doi: 10.1016/j.str.2010.04.004.

PMID:
20637418
[PubMed - indexed for MEDLINE]
Free Article

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