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Items: 1 to 20 of 181

1.

Circulation of clonal populations of fluoroquinolone-resistant CTX-M-15-producing Escherichia coli ST410 in humans and animals in Germany.

Falgenhauer L, Imirzalioglu C, Ghosh H, Gwozdzinski K, Schmiedel J, Gentil K, Bauerfeind R, Kämpfer P, Seifert H, Michael GB, Schwarz S, Pfeifer Y, Werner G, Pietsch M, Roesler U, Guerra B, Fischer J, Sharp H, Käsbohrer A, Goesmann A, Hille K, Kreienbrock L, Chakraborty T.

Int J Antimicrob Agents. 2016 May 12. pii: S0924-8579(16)30086-3. doi: 10.1016/j.ijantimicag.2016.03.019. [Epub ahead of print]

PMID:
27208899
2.

Next Generation Sequencing Identifies Five Major Classes of Potentially Therapeutic Enzymes Secreted by Lucilia sericata Medical Maggots.

Franta Z, Vogel H, Lehmann R, Rupp O, Goesmann A, Vilcinskas A.

Biomed Res Int. 2016;2016:8285428. doi: 10.1155/2016/8285428. Epub 2016 Mar 28.

3.

EDGAR 2.0: an enhanced software platform for comparative gene content analyses.

Blom J, Kreis J, Spänig S, Juhre T, Bertelli C, Ernst C, Goesmann A.

Nucleic Acids Res. 2016 Apr 20. pii: gkw255. [Epub ahead of print]

4.

Pan-genome analysis of Aeromonas hydrophila, Aeromonas veronii and Aeromonas caviae indicates phylogenomic diversity and greater pathogenic potential for Aeromonas hydrophila.

Ghatak S, Blom J, Das S, Sanjukta R, Puro K, Mawlong M, Shakuntala I, Sen A, Goesmann A, Kumar A, Ngachan SV.

Antonie Van Leeuwenhoek. 2016 Apr 13. [Epub ahead of print]

PMID:
27075453
5.

DistAMo: A Web-Based Tool to Characterize DNA-Motif Distribution on Bacterial Chromosomes.

Sobetzko P, Jelonek L, Strickert M, Han W, Goesmann A, Waldminghaus T.

Front Microbiol. 2016 Mar 11;7:283. doi: 10.3389/fmicb.2016.00283. eCollection 2016.

6.

Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations.

Langenkämper D, Jakobi T, Feld D, Jelonek L, Goesmann A, Nattkemper TW.

Front Genet. 2016 Feb 10;7:5. doi: 10.3389/fgene.2016.00005. eCollection 2016.

7.

Insect pathogenicity in plant-beneficial pseudomonads: phylogenetic distribution and comparative genomics.

Flury P, Aellen N, Ruffner B, Péchy-Tarr M, Fataar S, Metla Z, Dominguez-Ferreras A, Bloemberg G, Frey J, Goesmann A, Raaijmakers JM, Duffy B, Höfte M, Blom J, Smits TH, Keel C, Maurhofer M.

ISME J. 2016 Feb 19. doi: 10.1038/ismej.2016.5. [Epub ahead of print]

PMID:
26894448
8.

Draft genome sequence of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB strain BBA69670.

Wibberg D, Andersson L, Rupp O, Goesmann A, Pühler A, Varrelmann M, Dixelius C, Schlüter A.

J Biotechnol. 2016 Mar 20;222:11-2. doi: 10.1016/j.jbiotec.2016.02.001. Epub 2016 Feb 3.

PMID:
26851388
9.

Erwinia gerundensis sp. nov., a cosmopolitan epiphyte originally isolated from pome fruit trees.

Rezzonico F, Smits TH, Born Y, Blom J, Frey JE, Goesmann A, Cleenwerck I, de Vos P, Bonaterra A, Duffy B, Montesinos E.

Int J Syst Evol Microbiol. 2016 Jan 26. doi: 10.1099/ijsem.0.000920. [Epub ahead of print]

PMID:
26813696
10.

Intraclonal genome diversity of the major Pseudomonas aeruginosa clones C and PA14.

Fischer S, Klockgether J, Morán Losada P, Chouvarine P, Cramer N, Davenport CF, Dethlefsen S, Dorda M, Goesmann A, Hilker R, Mielke S, Schönfelder T, Suerbaum S, Türk O, Woltemate S, Wiehlmann L, Tümmler B.

Environ Microbiol Rep. 2016 Apr;8(2):227-34. doi: 10.1111/1758-2229.12372. Epub 2016 Jan 28.

11.

Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R. solani AG1-IA, AG1-IB, AG3 and AG8 Isolates.

Wibberg D, Rupp O, Blom J, Jelonek L, Kröber M, Verwaaijen B, Goesmann A, Albaum S, Grosch R, Pühler A, Schlüter A.

PLoS One. 2015 Dec 21;10(12):e0144769. doi: 10.1371/journal.pone.0144769. eCollection 2015.

12.

Draft Genome Sequence of the Commercial Biocontrol Strain Pantoea agglomerans P10c.

Smits TH, Rezzonico F, Blom J, Goesmann A, Abelli A, Kron Morelli R, Vanneste JL, Duffy B.

Genome Announc. 2015 Dec 10;3(6). pii: e01448-15. doi: 10.1128/genomeA.01448-15.

13.

De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite.

Pauli M, Chakarov N, Rupp O, Kalinowski J, Goesmann A, Sorenson MD, Krüger O, Hoffman JI.

BMC Genomics. 2015 Dec 9;16:1038. doi: 10.1186/s12864-015-2254-1.

14.

The pan-genome of Lactobacillus reuteri strains originating from the pig gastrointestinal tract.

Wegmann U, MacKenzie DA, Zheng J, Goesmann A, Roos S, Swarbreck D, Walter J, Crossman LC, Juge N.

BMC Genomics. 2015 Dec 1;16:1023. doi: 10.1186/s12864-015-2216-7.

15.

A detailed view of the intracellular transcriptome of Listeria monocytogenes in murine macrophages using RNA-seq.

Schultze T, Hilker R, Mannala GK, Gentil K, Weigel M, Farmani N, Windhorst AC, Goesmann A, Chakraborty T, Hain T.

Front Microbiol. 2015 Oct 30;6:1199. doi: 10.3389/fmicb.2015.01199. eCollection 2015.

16.

Non-pathogenic Rhizobium radiobacter F4 deploys plant beneficial activity independent of its host Piriformospora indica.

Glaeser SP, Imani J, Alabid I, Guo H, Kumar N, Kämpfer P, Hardt M, Blom J, Goesmann A, Rothballer M, Hartmann A, Kogel KH.

ISME J. 2016 Apr;10(4):871-84. doi: 10.1038/ismej.2015.163. Epub 2015 Oct 23.

PMID:
26495996
17.

Phylogenomic grouping of Listeria monocytogenes.

Doijad S, Weigel M, Barbuddhe S, Blom J, Goesmann A, Hain T, Chakraborty T.

Can J Microbiol. 2015 Sep;61(9):637-46. doi: 10.1139/cjm-2015-0281. Epub 2015 Jun 9.

PMID:
26245135
18.

Genome Sequence of the Urethral Isolate Pseudomonas aeruginosa RN21.

Wibberg D, Tielen P, Narten M, Schobert M, Blom J, Schatschneider S, Meyer AK, Neubauer R, Albersmeier A, Albaum S, Jahn M, Goesmann A, Vorhölter FJ, Pühler A, Jahn D.

Genome Announc. 2015 Jul 16;3(4). pii: e00788-15. doi: 10.1128/genomeA.00788-15.

19.

The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms.

Rupp O, Brinkrolf K, Buerth C, Kunigo M, Schneider J, Jaenicke S, Goesmann A, Pühler A, Jaeger KE, Ernst JF.

J Biotechnol. 2015 Oct 10;211:20-30. doi: 10.1016/j.jbiotec.2015.06.423. Epub 2015 Jul 3.

PMID:
26150016
20.

Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum.

Arnold M, Wibberg D, Blom J, Schatschneider S, Winkler A, Kutter Y, Rückert C, Albersmeier A, Albaum S, Goesmann A, Zange S, Heesemann J, Pühler A, Hogardt M, Vorhölter FJ.

Genome Announc. 2015 Jul 2;3(4). pii: e00680-15. doi: 10.1128/genomeA.00680-15.

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