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Results: 1 to 20 of 80

1.

RNA-seq: impact of RNA degradation on transcript quantification.

Gallego Romero I, Pai AA, Tung J, Gilad Y.

BMC Biol. 2014 May 30;12:42. doi: 10.1186/1741-7007-12-42.

PMID:
24885439
[PubMed - in process]
Free PMC Article
2.

Highly potent and selective ectonucleotide pyrophosphatase/phosphodiesterase I inhibitors based on an adenosine 5'-(α or γ)-thio-(α,β- or β,γ)-methylenetriphosphate scaffold.

Nadel Y, Lecka J, Gilad Y, Ben-David G, Förster D, Reiser G, Kenigsberg S, Camden J, Weisman GA, Senderowitz H, Sévigny J, Fischer B.

J Med Chem. 2014 Jun 12;57(11):4677-91. doi: 10.1021/jm500196c. Epub 2014 May 30.

PMID:
24846781
[PubMed - in process]
3.

Seasonal variation in human gut microbiome composition.

Davenport ER, Mizrahi-Man O, Michelini K, Barreiro LB, Ober C, Gilad Y.

PLoS One. 2014 Mar 11;9(3):e90731. doi: 10.1371/journal.pone.0090731. eCollection 2014.

PMID:
24618913
[PubMed - in process]
Free PMC Article
4.

The functional consequences of variation in transcription factor binding.

Cusanovich DA, Pavlovic B, Pritchard JK, Gilad Y.

PLoS Genet. 2014 Mar 6;10(3):e1004226. doi: 10.1371/journal.pgen.1004226. eCollection 2014 Mar.

PMID:
24603674
[PubMed - in process]
Free PMC Article
5.

Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes.

Schwalie PC, Ward MC, Cain CE, Faure AJ, Gilad Y, Odom DT, Flicek P.

Genome Biol. 2013 Dec 31;14(12):R148. [Epub ahead of print]

PMID:
24380390
[PubMed - as supplied by publisher]
Free PMC Article
6.

Does a unique olfactory genome imply a unique olfactory world?

Frumin I, Sobel N, Gilad Y.

Nat Neurosci. 2014 Jan;17(1):6-8. doi: 10.1038/nn.3608. No abstract available.

PMID:
24369370
[PubMed - indexed for MEDLINE]
7.

Docking studies on DNA intercalators.

Gilad Y, Senderowitz H.

J Chem Inf Model. 2014 Jan 27;54(1):96-107. doi: 10.1021/ci400352t. Epub 2013 Dec 13.

PMID:
24303988
[PubMed - in process]
8.

Identification of genetic variants that affect histone modifications in human cells.

McVicker G, van de Geijn B, Degner JF, Cain CE, Banovich NE, Raj A, Lewellen N, Myrthil M, Gilad Y, Pritchard JK.

Science. 2013 Nov 8;342(6159):747-9. doi: 10.1126/science.1242429. Epub 2013 Oct 17.

PMID:
24136359
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Primate transcript and protein expression levels evolve under compensatory selection pressures.

Khan Z, Ford MJ, Cusanovich DA, Mitrano A, Pritchard JK, Gilad Y.

Science. 2013 Nov 29;342(6162):1100-4. doi: 10.1126/science.1242379. Epub 2013 Oct 17.

PMID:
24136357
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Social environmental effects on gene regulation.

Tung J, Gilad Y.

Cell Mol Life Sci. 2013 Nov;70(22):4323-39. doi: 10.1007/s00018-013-1357-6. Epub 2013 May 18. Review.

PMID:
23685902
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: evaluation of effective study designs.

Mizrahi-Man O, Davenport ER, Gilad Y.

PLoS One. 2013;8(1):e53608. doi: 10.1371/journal.pone.0053608. Epub 2013 Jan 7.

PMID:
23308262
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Drug resistance to chlorambucil in murine B-cell leukemic cells is overcome by its conjugation to a targeting peptide.

Gellerman G, Baskin S, Galia L, Gilad Y, Firer MA.

Anticancer Drugs. 2013 Feb;24(2):112-9. doi: 10.1097/CAD.0b013e32835bb17a.

PMID:
23187462
[PubMed - indexed for MEDLINE]
13.

Controls of nucleosome positioning in the human genome.

Gaffney DJ, McVicker G, Pai AA, Fondufe-Mittendorf YN, Lewellen N, Michelini K, Widom J, Gilad Y, Pritchard JK.

PLoS Genet. 2012;8(11):e1003036. doi: 10.1371/journal.pgen.1003036. Epub 2012 Nov 15.

PMID:
23166509
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

The contribution of RNA decay quantitative trait loci to inter-individual variation in steady-state gene expression levels.

Pai AA, Cain CE, Mizrahi-Man O, De Leon S, Lewellen N, Veyrieras JB, Degner JF, Gaffney DJ, Pickrell JK, Stephens M, Pritchard JK, Gilad Y.

PLoS Genet. 2012;8(10):e1003000. doi: 10.1371/journal.pgen.1003000. Epub 2012 Oct 11.

PMID:
23071454
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Genomics: ENCODE explained.

Ecker JR, Bickmore WA, Barroso I, Pritchard JK, Gilad Y, Segal E.

Nature. 2012 Sep 6;489(7414):52-5. doi: 10.1038/489052a. No abstract available.

PMID:
22955614
[PubMed - indexed for MEDLINE]
16.

General olfactory sensitivity database (GOSdb): candidate genes and their genomic variations.

Keydar I, Ben-Asher E, Feldmesser E, Nativ N, Oshimoto A, Restrepo D, Matsunami H, Chien MS, Pinto JM, Gilad Y, Olender T, Lancet D.

Hum Mutat. 2013 Jan;34(1):32-41. doi: 10.1002/humu.22212. Epub 2012 Oct 11.

PMID:
22936402
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Regulatory element copy number differences shape primate expression profiles.

Iskow RC, Gokcumen O, Abyzov A, Malukiewicz J, Zhu Q, Sukumar AT, Pai AA, Mills RE, Habegger L, Cusanovich DA, Rubel MA, Perry GH, Gerstein M, Stone AC, Gilad Y, Lee C.

Proc Natl Acad Sci U S A. 2012 Jul 31;109(31):12656-61. doi: 10.1073/pnas.1205199109. Epub 2012 Jul 13.

PMID:
22797897
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Comparative studies of gene expression and the evolution of gene regulation.

Romero IG, Ruvinsky I, Gilad Y.

Nat Rev Genet. 2012 Jun 18;13(7):505-16. doi: 10.1038/nrg3229. Review.

PMID:
22705669
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Social environment is associated with gene regulatory variation in the rhesus macaque immune system.

Tung J, Barreiro LB, Johnson ZP, Hansen KD, Michopoulos V, Toufexis D, Michelini K, Wilson ME, Gilad Y.

Proc Natl Acad Sci U S A. 2012 Apr 24;109(17):6490-5. doi: 10.1073/pnas.1202734109. Epub 2012 Apr 9.

PMID:
22493251
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".

Pickrell JK, Gilad Y, Pritchard JK.

Science. 2012 Mar 16;335(6074):1302; author reply 1302. doi: 10.1126/science.1210484.

PMID:
22422963
[PubMed - indexed for MEDLINE]
Free Article

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