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Results: 1 to 20 of 46

1.

Gut microbiomes of Indian children of varying nutritional status.

Ghosh TS, Gupta SS, Bhattacharya T, Yadav D, Barik A, Chowdhury A, Das B, Mande SS, Nair GB.

PLoS One. 2014 Apr 24;9(4):e95547. doi: 10.1371/journal.pone.0095547. eCollection 2014.

PMID:
24763225
[PubMed - in process]
Free PMC Article
2.

Igloo-Plot: a tool for visualization of multidimensional datasets.

Kuntal BK, Ghosh TS, Mande SS.

Genomics. 2014 Jan;103(1):11-20. doi: 10.1016/j.ygeno.2014.01.004. Epub 2014 Jan 17.

PMID:
24444495
[PubMed - in process]
3.

In silico analysis of antibiotic resistance genes in the gut microflora of individuals from diverse geographies and age-groups.

Ghosh TS, Gupta SS, Nair GB, Mande SS.

PLoS One. 2013 Dec 31;8(12):e83823. doi: 10.1371/journal.pone.0083823. eCollection 2013.

PMID:
24391833
[PubMed - in process]
Free PMC Article
4.

Characterization of fluoride-tolerant halophilic Bacillus flexus NM25 (HQ875778) isolated from fluoride-affected soil in Birbhum District, West Bengal, India.

Pal KC, Mondal NK, Chatterjee S, Ghosh TS, Datta JK.

Environ Monit Assess. 2014 Feb;186(2):699-709. doi: 10.1007/s10661-013-3408-8. Epub 2013 Sep 26.

PMID:
24068284
[PubMed - indexed for MEDLINE]
5.

Community-analyzer: a platform for visualizing and comparing microbial community structure across microbiomes.

Kuntal BK, Ghosh TS, Mande SS.

Genomics. 2013 Oct;102(4):409-18. doi: 10.1016/j.ygeno.2013.08.004. Epub 2013 Aug 24.

PMID:
23978768
[PubMed - indexed for MEDLINE]
6.

Comparison of 3 school-based influenza surveillance indicators: lessons learned from 2009 pandemic influenza A (H1N1)--Denver Metropolitan Region, Colorado.

Williams NJ, Ghosh TS, Bisgard KM, Vogt RL.

J Public Health Manag Pract. 2013 Mar-Apr;19(2):119-25. doi: 10.1097/PHH.0b013e318252f005.

PMID:
23358289
[PubMed - indexed for MEDLINE]
7.

Multistate outbreak of Escherichia coli O157:H7 infections associated with in-store sampling of an aged raw-milk Gouda cheese, 2010.

McCollum JT, Williams NJ, Beam SW, Cosgrove S, Ettestad PJ, Ghosh TS, Kimura AC, Nguyen L, Stroika SG, Vogt RL, Watkins AK, Weiss JR, Williams IT, Cronquist AB.

J Food Prot. 2012 Oct;75(10):1759-65. doi: 10.4315/0362-028X.JFP-12-136.

PMID:
23043823
[PubMed - indexed for MEDLINE]
8.

Classification of metagenomic sequences: methods and challenges.

Mande SS, Mohammed MH, Ghosh TS.

Brief Bioinform. 2012 Nov;13(6):669-81. doi: 10.1093/bib/bbs054. Epub 2012 Sep 8. Review.

PMID:
22962338
[PubMed - indexed for MEDLINE]
9.

Derby district redevelopment in Colorado: case study on the health impact assessment process.

Maclennan CF, Ghosh TS, Juliusson L, Vogt RL, Boehmer TK.

J Environ Health. 2012 Jul-Aug;75(1):8-13.

PMID:
22866397
[PubMed - indexed for MEDLINE]
10.

HabiSign: a novel approach for comparison of metagenomes and rapid identification of habitat-specific sequences.

Ghosh TS, Mohammed MH, Rajasingh H, Chadaram S, Mande SS.

BMC Bioinformatics. 2011 Nov 30;12 Suppl 13:S9. doi: 10.1186/1471-2105-12-S13-S9. Epub 2011 Nov 30.

PMID:
22373355
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

i-rDNA: alignment-free algorithm for rapid in silico detection of ribosomal gene fragments from metagenomic sequence data sets.

Mohammed MH, Ghosh TS, Chadaram S, Mande SS.

BMC Genomics. 2011 Nov 30;12 Suppl 3:S12. doi: 10.1186/1471-2164-12-S3-S12. Epub 2011 Nov 30.

PMID:
22369265
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

INDUS - a composition-based approach for rapid and accurate taxonomic classification of metagenomic sequences.

Mohammed MH, Ghosh TS, Reddy RM, Reddy CV, Singh NK, Mande SS.

BMC Genomics. 2011 Nov 30;12 Suppl 3:S4. doi: 10.1186/1471-2164-12-S3-S4. Epub 2011 Nov 30.

PMID:
22369237
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

C16S - a Hidden Markov Model based algorithm for taxonomic classification of 16S rRNA gene sequences.

Ghosh TS, Gajjalla P, Mohammed MH, Mande SS.

Genomics. 2012 Apr;99(4):195-201. doi: 10.1016/j.ygeno.2012.01.008. Epub 2012 Feb 3.

PMID:
22326741
[PubMed - indexed for MEDLINE]
Free Article
14.

Needlestick injury surveillance during mass vaccination clinics: lessons learned and why more is needed--Tri-County (Denver Metropolitan) region, Colorado, 2009.

Williams NJ, Ghosh TS, Vogt RL.

Am J Infect Control. 2012 Oct;40(8):768-70. doi: 10.1016/j.ajic.2011.09.014. Epub 2012 Feb 3.

PMID:
22305115
[PubMed - indexed for MEDLINE]
15.

Outbreak of shiga toxin-producing Escherichia coli serotype O26: H11 infection at a child care center in Colorado.

Brown JA, Hite DS, Gillim-Ross LA, Maguire HF, Bennett JK, Patterson JJ, Comstock NA, Watkins AK, Ghosh TS, Vogt RL.

Pediatr Infect Dis J. 2012 Apr;31(4):379-83. doi: 10.1097/INF.0b013e3182457122.

PMID:
22189536
[PubMed - indexed for MEDLINE]
16.

Computational analysis of the ESX-1 region of Mycobacterium tuberculosis: insights into the mechanism of type VII secretion system.

Das C, Ghosh TS, Mande SS.

PLoS One. 2011;6(11):e27980. doi: 10.1371/journal.pone.0027980. Epub 2011 Nov 30.

PMID:
22140496
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Eu-Detect: an algorithm for detecting eukaryotic sequences in metagenomic data sets.

Mohammed MH, Chadaram S, Komanduri D, Ghosh TS, Mande SS.

J Biosci. 2011 Sep;36(4):709-17.

PMID:
21857117
[PubMed - indexed for MEDLINE]
Free Article
18.

Primary care physicians perceptions and practices regarding fall prevention in adult's 65 years and over.

Jones TS, Ghosh TS, Horn K, Smith J, Vogt RL.

Accid Anal Prev. 2011 Sep;43(5):1605-9. doi: 10.1016/j.aap.2011.03.013. Epub 2011 Apr 14.

PMID:
21658485
[PubMed - indexed for MEDLINE]
19.

Metagenome of the gut of a malnourished child.

Gupta SS, Mohammed MH, Ghosh TS, Kanungo S, Nair GB, Mande SS.

Gut Pathog. 2011 May 20;3:7. doi: 10.1186/1757-4749-3-7.

PMID:
21599906
[PubMed]
Free PMC Article
20.

ProViDE: A software tool for accurate estimation of viral diversity in metagenomic samples.

Ghosh TS, Mohammed MH, Komanduri D, Mande SS.

Bioinformation. 2011 Mar 26;6(2):91-4.

PMID:
21544173
[PubMed]
Free PMC Article

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