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Results: 1 to 20 of 28

1.

Pathogen-related differences in the abundance of presented antigen are reflected in CD4+ T cell dynamic behavior and effector function in the lung.

Torabi-Parizi P, Vrisekoop N, Kastenmuller W, Gerner MY, Egen JG, Germain RN.

J Immunol. 2014 Feb 15;192(4):1651-60. doi: 10.4049/jimmunol.1301743. Epub 2014 Jan 15.

PMID:
24431231
[PubMed - indexed for MEDLINE]
2.

Cutting edge: IL-12 and type I IFN differentially program CD8 T cells for programmed death 1 re-expression levels and tumor control.

Gerner MY, Heltemes-Harris LM, Fife BT, Mescher MF.

J Immunol. 2013 Aug 1;191(3):1011-5. doi: 10.4049/jimmunol.1300652. Epub 2013 Jun 26.

PMID:
23804712
[PubMed - indexed for MEDLINE]
3.

CD4 T follicular helper cell dynamics during SIV infection.

Petrovas C, Yamamoto T, Gerner MY, Boswell KL, Wloka K, Smith EC, Ambrozak DR, Sandler NG, Timmer KJ, Sun X, Pan L, Poholek A, Rao SS, Brenchley JM, Alam SM, Tomaras GD, Roederer M, Douek DC, Seder RA, Germain RN, Haddad EK, Koup RA.

J Clin Invest. 2012 Sep 4;122(9):3281-94. doi: 10.1172/JCI63039. Epub 2012 Aug 27.

PMID:
22922258
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Histo-cytometry: a method for highly multiplex quantitative tissue imaging analysis applied to dendritic cell subset microanatomy in lymph nodes.

Gerner MY, Kastenmuller W, Ifrim I, Kabat J, Germain RN.

Immunity. 2012 Aug 24;37(2):364-76. doi: 10.1016/j.immuni.2012.07.011. Epub 2012 Aug 2.

PMID:
22863836
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

BioContext: an integrated text mining system for large-scale extraction and contextualization of biomolecular events.

Gerner M, Sarafraz F, Bergman CM, Nenadic G.

Bioinformatics. 2012 Aug 15;28(16):2154-61. doi: 10.1093/bioinformatics/bts332. Epub 2012 Jun 17.

PMID:
22711795
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Towards semi-automated curation: using text mining to recreate the HIV-1, human protein interaction database.

Jamieson DG, Gerner M, Sarafraz F, Nenadic G, Robertson DL.

Database (Oxford). 2012 Apr 23;2012:bas023. doi: 10.1093/database/bas023. Print 2012.

PMID:
22529179
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The gene normalization task in BioCreative III.

Lu Z, Kao HY, Wei CH, Huang M, Liu J, Kuo CJ, Hsu CN, Tsai RT, Dai HJ, Okazaki N, Cho HC, Gerner M, Solt I, Agarwal S, Liu F, Vishnyakova D, Ruch P, Romacker M, Rinaldi F, Bhattacharya S, Srinivasan P, Liu H, Torii M, Matos S, Campos D, Verspoor K, Livingston KM, Wilbur WJ.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S2. doi: 10.1186/1471-2105-12-S8-S2.

PMID:
22151901
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

pubmed2ensembl: a resource for mining the biological literature on genes.

Baran J, Gerner M, Haeussler M, Nenadic G, Bergman CM.

PLoS One. 2011;6(9):e24716. doi: 10.1371/journal.pone.0024716. Epub 2011 Sep 29.

PMID:
21980353
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

The GNAT library for local and remote gene mention normalization.

Hakenberg J, Gerner M, Haeussler M, Solt I, Plake C, Schroeder M, Gonzalez G, Nenadic G, Bergman CM.

Bioinformatics. 2011 Oct 1;27(19):2769-71. doi: 10.1093/bioinformatics/btr455. Epub 2011 Aug 3.

PMID:
21813477
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Annotating genes and genomes with DNA sequences extracted from biomedical articles.

Haeussler M, Gerner M, Bergman CM.

Bioinformatics. 2011 Apr 1;27(7):980-6. doi: 10.1093/bioinformatics/btr043. Epub 2011 Feb 16.

PMID:
21325301
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

The in situ dynamics of dendritic cell interactions.

Kastenmüller W, Gerner MY, Germain RN.

Eur J Immunol. 2010 Aug;40(8):2103-6. doi: 10.1002/eji.201040482.

PMID:
20853494
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Magnetic fields for fluid motion.

Weston MC, Gerner MD, Fritsch I.

Anal Chem. 2010 May 1;82(9):3411-8. doi: 10.1021/ac901783n.

PMID:
20380431
[PubMed]
13.

The retinitis pigmentosa GTPase regulator interacting protein 1 (RPGRIP1) links RPGR to the nephronophthisis protein network.

Gerner M, Haribaskar R, Pütz M, Czerwitzki J, Walz G, Schäfer T.

Kidney Int. 2010 May;77(10):891-6. doi: 10.1038/ki.2010.27. Epub 2010 Mar 3.

PMID:
20200501
[PubMed - indexed for MEDLINE]
14.

LINNAEUS: a species name identification system for biomedical literature.

Gerner M, Nenadic G, Bergman CM.

BMC Bioinformatics. 2010 Feb 11;11:85. doi: 10.1186/1471-2105-11-85.

PMID:
20149233
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Extracorporeal photopheresis efficiently impairs the proinflammatory capacity of human 6-sulfo LacNAc dendritic cells.

Gerner M, Hölig K, Wehner R, Zhao S, Schäkel K, Bachmann MP, Rieber EP, Bornhäuser M, Schmitz M.

Transplantation. 2009 Apr 27;87(8):1134-9. doi: 10.1097/TP.0b013e31819e02d4.

PMID:
19384158
[PubMed - indexed for MEDLINE]
16.

Antigen processing and MHC-II presentation by dermal and tumor-infiltrating dendritic cells.

Gerner MY, Mescher MF.

J Immunol. 2009 Mar 1;182(5):2726-37. doi: 10.4049/jimmunol.0803479.

PMID:
19234167
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Genetic and physical interaction between the NPHP5 and NPHP6 gene products.

Schäfer T, Pütz M, Lienkamp S, Ganner A, Bergbreiter A, Ramachandran H, Gieloff V, Gerner M, Mattonet C, Czarnecki PG, Sayer JA, Otto EA, Hildebrandt F, Kramer-Zucker A, Walz G.

Hum Mol Genet. 2008 Dec 1;17(23):3655-62. doi: 10.1093/hmg/ddn260. Epub 2008 Aug 23. Erratum in: Hum Mol Genet. 2009 Nov 1;18(21):4226.

PMID:
18723859
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Defective MHC class II presentation by dendritic cells limits CD4 T cell help for antitumor CD8 T cell responses.

Gerner MY, Casey KA, Mescher MF.

J Immunol. 2008 Jul 1;181(1):155-64.

PMID:
18566380
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Activation-induced non-responsiveness (anergy) limits CD8 T cell responses to tumors.

Mescher MF, Popescu FE, Gerner M, Hammerbeck CD, Curtsinger JM.

Semin Cancer Biol. 2007 Aug;17(4):299-308. Epub 2007 Jun 23. Review.

PMID:
17656106
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Signal 3 availability limits the CD8 T cell response to a solid tumor.

Curtsinger JM, Gerner MY, Lins DC, Mescher MF.

J Immunol. 2007 Jun 1;178(11):6752-60.

PMID:
17513722
[PubMed - indexed for MEDLINE]
Free Article

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