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Results: 15

1.

Dynamic Analysis of CO2 Labeling and Cell Respiration Using Membrane-Inlet Mass Spectrometry.

Yang TH.

Methods Mol Biol. 2014;1191:175-94. doi: 10.1007/978-1-4939-1170-7_11.

PMID:
25178791
[PubMed - in process]
2.

Overcoming the metabolic burden of protein secretion in Schizosaccharomyces pombe--a quantitative approach using 13C-based metabolic flux analysis.

Klein T, Lange S, Wilhelm N, Bureik M, Yang TH, Heinzle E, Schneider K.

Metab Eng. 2014 Jan;21:34-45. doi: 10.1016/j.ymben.2013.11.001. Epub 2013 Nov 19.

PMID:
24269998
[PubMed - indexed for MEDLINE]
3.

From the first drop to the first truckload: commercialization of microbial processes for renewable chemicals.

Van Dien S.

Curr Opin Biotechnol. 2013 Dec;24(6):1061-8. doi: 10.1016/j.copbio.2013.03.002. Epub 2013 Mar 25. Review.

PMID:
23537815
[PubMed - indexed for MEDLINE]
4.

13C-based metabolic flux analysis: fundamentals and practice.

Yang TH.

Methods Mol Biol. 2013;985:297-334. doi: 10.1007/978-1-62703-299-5_15.

PMID:
23417810
[PubMed - indexed for MEDLINE]
5.

Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol.

Yim H, Haselbeck R, Niu W, Pujol-Baxley C, Burgard A, Boldt J, Khandurina J, Trawick JD, Osterhout RE, Stephen R, Estadilla J, Teisan S, Schreyer HB, Andrae S, Yang TH, Lee SY, Burk MJ, Van Dien S.

Nat Chem Biol. 2011 May 22;7(7):445-52. doi: 10.1038/nchembio.580.

PMID:
21602812
[PubMed - indexed for MEDLINE]
6.

Constraint-based modeling analysis of the metabolism of two Pelobacter species.

Sun J, Haveman SA, Bui O, Fahland TR, Lovley DR.

BMC Syst Biol. 2010 Dec 23;4:174. doi: 10.1186/1752-0509-4-174.

PMID:
21182788
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Metabolic response of Geobacter sulfurreducens towards electron donor/acceptor variation.

Yang TH, Coppi MV, Lovley DR, Sun J.

Microb Cell Fact. 2010 Nov 22;9:90. doi: 10.1186/1475-2859-9-90.

PMID:
21092215
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Numerical bias estimation for mass spectrometric mass isotopomer analysis.

Yang TH, Bolten CJ, Coppi MV, Sun J, Heinzle E.

Anal Biochem. 2009 May 15;388(2):192-203. doi: 10.1016/j.ab.2009.03.005. Epub 2009 Mar 9.

PMID:
19275875
[PubMed - indexed for MEDLINE]
9.

Genome-scale constraint-based modeling of Geobacter metallireducens.

Sun J, Sayyar B, Butler JE, Pharkya P, Fahland TR, Famili I, Schilling CH, Lovley DR, Mahadevan R.

BMC Syst Biol. 2009 Jan 28;3:15. doi: 10.1186/1752-0509-3-15.

PMID:
19175927
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Theoretical analysis of amino acid-producing Escherichia coli using a stoichiometric model and multivariate linear regression.

Van Dien SJ, Iwatani S, Usuda Y, Matsui K.

J Biosci Bioeng. 2006 Jul;102(1):34-40.

PMID:
16952834
[PubMed - indexed for MEDLINE]
Free Article
11.

Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling.

Mahadevan R, Bond DR, Butler JE, Esteve-Nuñez A, Coppi MV, Palsson BO, Schilling CH, Lovley DR.

Appl Environ Microbiol. 2006 Feb;72(2):1558-68.

PMID:
16461711
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Use of constraint-based modeling for the prediction and validation of antimicrobial targets.

Trawick JD, Schilling CH.

Biochem Pharmacol. 2006 Mar 30;71(7):1026-35. Epub 2005 Dec 2. Review.

PMID:
16329998
[PubMed - indexed for MEDLINE]
13.

Monte Carlo sampling can be used to determine the size and shape of the steady-state flux space.

Wiback SJ, Famili I, Greenberg HJ, Palsson BØ.

J Theor Biol. 2004 Jun 21;228(4):437-47.

PMID:
15178193
[PubMed - indexed for MEDLINE]
14.

The effects of alternate optimal solutions in constraint-based genome-scale metabolic models.

Mahadevan R, Schilling CH.

Metab Eng. 2003 Oct;5(4):264-76.

PMID:
14642354
[PubMed - indexed for MEDLINE]
15.

Genome-scale metabolic model of Helicobacter pylori 26695.

Schilling CH, Covert MW, Famili I, Church GM, Edwards JS, Palsson BO.

J Bacteriol. 2002 Aug;184(16):4582-93.

PMID:
12142428
[PubMed - indexed for MEDLINE]
Free PMC Article

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