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Results: 1 to 20 of 137

1.

Viral RNAs Are Unusually Compact.

Gopal A, Egecioglu DE, Yoffe AM, Ben-Shaul A, Rao AL, Knobler CM, Gelbart WM.

PLoS One. 2014 Sep 4;9(9):e105875. doi: 10.1371/journal.pone.0105875. eCollection 2014.

PMID:
25188030
[PubMed - in process]
Free PMC Article
2.

Role of electrostatics in the assembly pathway of a single-stranded RNA virus.

Garmann RF, Comas-Garcia M, Koay MS, Cornelissen JJ, Knobler CM, Gelbart WM.

J Virol. 2014 Sep 15;88(18):10472-9. doi: 10.1128/JVI.01044-14. Epub 2014 Jun 25.

PMID:
24965458
[PubMed - in process]
3.

Characterization of Viral Capsid Protein Self-Assembly around Short Single-Stranded RNA.

Comas-Garcia M, Garmann RF, Singaram SW, Ben-Shaul A, Knobler CM, Gelbart WM.

J Phys Chem B. 2014 Jun 30. [Epub ahead of print]

PMID:
24933579
[PubMed - as supplied by publisher]
4.

Electrophoretic mobilities of a viral capsid, its capsid protein, and their relation to viral assembly.

Vega-Acosta JR, Cadena-Nava RD, Gelbart WM, Knobler CM, Ruiz-García J.

J Phys Chem B. 2014 Feb 27;118(8):1984-9. doi: 10.1021/jp407379t. Epub 2014 Feb 14.

PMID:
24467401
[PubMed - in process]
5.

The assembly pathway of an icosahedral single-stranded RNA virus depends on the strength of inter-subunit attractions.

Garmann RF, Comas-Garcia M, Gopal A, Knobler CM, Gelbart WM.

J Mol Biol. 2014 Mar 6;426(5):1050-60. doi: 10.1016/j.jmb.2013.10.017. Epub 2013 Oct 19.

PMID:
24148696
[PubMed - indexed for MEDLINE]
6.

Reconstituted plant viral capsids can release genes to mammalian cells.

Azizgolshani O, Garmann RF, Cadena-Nava R, Knobler CM, Gelbart WM.

Virology. 2013 Jun 20;441(1):12-7. doi: 10.1016/j.virol.2013.03.001. Epub 2013 Apr 19.

PMID:
23608360
[PubMed - indexed for MEDLINE]
Free Article
7.

In vitro quantification of the relative packaging efficiencies of single-stranded RNA molecules by viral capsid protein.

Comas-Garcia M, Cadena-Nava RD, Rao AL, Knobler CM, Gelbart WM.

J Virol. 2012 Nov;86(22):12271-82. doi: 10.1128/JVI.01695-12. Epub 2012 Sep 5.

PMID:
22951822
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Automatic categorization of diverse experimental information in the bioscience literature.

Fang R, Schindelman G, Van Auken K, Fernandes J, Chen W, Wang X, Davis P, Tuli MA, Marygold SJ, Millburn G, Matthews B, Zhang H, Brown N, Gelbart WM, Sternberg PW.

BMC Bioinformatics. 2012 Jan 26;13:16. doi: 10.1186/1471-2105-13-16.

PMID:
22280404
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Self-assembly of viral capsid protein and RNA molecules of different sizes: requirement for a specific high protein/RNA mass ratio.

Cadena-Nava RD, Comas-Garcia M, Garmann RF, Rao AL, Knobler CM, Gelbart WM.

J Virol. 2012 Mar;86(6):3318-26. doi: 10.1128/JVI.06566-11. Epub 2011 Dec 28.

PMID:
22205731
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Visualizing large RNA molecules in solution.

Gopal A, Zhou ZH, Knobler CM, Gelbart WM.

RNA. 2012 Feb;18(2):284-99. doi: 10.1261/rna.027557.111. Epub 2011 Dec 21.

PMID:
22190747
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

The size of RNA as an ideal branched polymer.

Fang LT, Gelbart WM, Ben-Shaul A.

J Chem Phys. 2011 Oct 21;135(15):155105. doi: 10.1063/1.3652763.

PMID:
22029339
[PubMed - indexed for MEDLINE]
12.

Rescue of infectious particles from preassembled alphavirus nucleocapsid cores.

Snyder JE, Azizgolshani O, Wu B, He Y, Lee AC, Jose J, Suter DM, Knobler CM, Gelbart WM, Kuhn RJ.

J Virol. 2011 Jun;85(12):5773-81. doi: 10.1128/JVI.00039-11. Epub 2011 Apr 6.

PMID:
21471237
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Salt-dependent DNA-DNA spacings in intact bacteriophage λ reflect relative importance of DNA self-repulsion and bending energies.

Qiu X, Rau DC, Parsegian VA, Fang LT, Knobler CM, Gelbart WM.

Phys Rev Lett. 2011 Jan 14;106(2):028102. Epub 2011 Jan 12.

PMID:
21405253
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

A sequential folding model predicts length-independent secondary structure properties of long ssRNA.

Fang LT, Yoffe AM, Gelbart WM, Ben-Shaul A.

J Phys Chem B. 2011 Mar 31;115(12):3193-9. doi: 10.1021/jp110680e. Epub 2011 Mar 3.

PMID:
21370842
[PubMed - indexed for MEDLINE]
15.

Exploiting fluorescent polymers to probe the self-assembly of virus-like particles.

Cadena-Nava RD, Hu Y, Garmann RF, Ng B, Zelikin AN, Knobler CM, Gelbart WM.

J Phys Chem B. 2011 Mar 17;115(10):2386-91. doi: 10.1021/jp1094118. Epub 2011 Feb 22.

PMID:
21338131
[PubMed - indexed for MEDLINE]
16.

The ends of a large RNA molecule are necessarily close.

Yoffe AM, Prinsen P, Gelbart WM, Ben-Shaul A.

Nucleic Acids Res. 2011 Jan;39(1):292-9. doi: 10.1093/nar/gkq642. Epub 2010 Sep 1.

PMID:
20810537
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Multishell structures of virus coat proteins.

Prinsen P, van der Schoot P, Gelbart WM, Knobler CM.

J Phys Chem B. 2010 Apr 29;114(16):5522-33. doi: 10.1021/jp911040z.

PMID:
20369869
[PubMed - indexed for MEDLINE]
18.

Prepublication data sharing.

Toronto International Data Release Workshop Authors, Birney E, Hudson TJ, Green ED, Gunter C, Eddy S, Rogers J, Harris JR, Ehrlich SD, Apweiler R, Austin CP, Berglund L, Bobrow M, Bountra C, Brookes AJ, Cambon-Thomsen A, Carter NP, Chisholm RL, Contreras JL, Cooke RM, Crosby WL, Dewar K, Durbin R, Dyke SO, Ecker JR, El Emam K, Feuk L, Gabriel SB, Gallacher J, Gelbart WM, Granell A, Guarner F, Hubbard T, Jackson SA, Jennings JL, Joly Y, Jones SM, Kaye J, Kennedy KL, Knoppers BM, Kyrpides NC, Lowrance WW, Luo J, MacKay JJ, Martín-Rivera L, McCombie WR, McPherson JD, Miller L, Miller W, Moerman D, Mooser V, Morton CC, Ostell JM, Ouellette BF, Parkhill J, Raina PS, Rawlings C, Scherer SE, Scherer SW, Schofield PN, Sensen CW, Stodden VC, Sussman MR, Tanaka T, Thornton J, Tsunoda T, Valle D, Vuorio EI, Walker NM, Wallace S, Weinstock G, Whitman WB, Worley KC, Wu C, Wu J, Yu J.

Nature. 2009 Sep 10;461(7261):168-70. doi: 10.1038/461168a.

PMID:
19741685
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Phase diagram of self-assembled viral capsid protein polymorphs.

Lavelle L, Gingery M, Phillips M, Gelbart WM, Knobler CM, Cadena-Nava RD, Vega-Acosta JR, Pinedo-Torres LA, Ruiz-Garcia J.

J Phys Chem B. 2009 Mar 26;113(12):3813-9.

PMID:
19673134
[PubMed - indexed for MEDLINE]
20.

Large-scale functional annotation and expanded implementations of the P{wHy} hybrid transposon in the Drosophila melanogaster genome.

Myrick KV, Huet F, Mohr SE, Alvarez-García I, Lu JT, Smith MA, Crosby MA, Gelbart WM.

Genetics. 2009 Jul;182(3):653-60. doi: 10.1534/genetics.109.103762. Epub 2009 Apr 27.

PMID:
19398769
[PubMed - indexed for MEDLINE]
Free PMC Article

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