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Results: 1 to 20 of 186

1.

Proteogenomics analysis reveals specific genomic orientations of distal regulatory regions composed by non-canonical histone variants.

Won KJ, Choi I, LeRoy G, Zee BM, Sidoli S, Gonzales-Cope M, Garcia BA.

Epigenetics Chromatin. 2015 Apr 10;8:13. doi: 10.1186/s13072-015-0005-9. eCollection 2015.

2.

LLY-507, a Cell-Active, Potent and Selective Inhibitor of Protein Lysine Methyltransferase SMYD2.

Nguyen H, Allali-Hassani A, Antonysamy S, Chang S, Chen LH, Curtis C, Emtage S, Fan L, Gheyi T, Li F, Liu S, Martin JR, Mendel D, Olsen JB, Pelletier L, Shatseva T, Wu S, Zhang FF, Arrowsmith CH, Brown PJ, Campbell RM, Garcia BA, Barsyte-Lovejoy D, Mader M, Vedadi M.

J Biol Chem. 2015 Mar 30. pii: jbc.M114.626861. [Epub ahead of print]

3.

Acute Fibrinous Organizing Pneumonia: A Case Report and Literature Review.

Garcia BA, Goede T, Mohammed TL.

Curr Probl Diagn Radiol. 2015 Feb 24. pii: S0363-0188(15)00010-9. doi: 10.1067/j.cpradiol.2015.02.006. [Epub ahead of print]

PMID:
25817128
4.

EpiProfile quantifies histone modifications by extracting retention time and intensity in high-resolution mass spectra.

Yuan ZF, Lin S, Molden RC, Cao XJ, Bhanu NV, Wang X, Sidoli S, Liu S, Garcia BA.

Mol Cell Proteomics. 2015 Mar 24. pii: mcp.M114.046011. [Epub ahead of print]

5.

Bottom-up and middle-down proteomics have comparable accuracies in defining histone post-translational modification relative abundance and stoichiometry.

Sidoli S, Lin S, Karch KR, Garcia BA.

Anal Chem. 2015 Mar 17;87(6):3129-33. doi: 10.1021/acs.analchem.5b00072. Epub 2015 Mar 3.

PMID:
25719549
6.

Characterization of BRD4 during Mammalian Postmeiotic Sperm Development.

Bryant JM, Donahue G, Wang X, Meyer-Ficca M, Luense LJ, Weller AH, Bartolomei MS, Blobel GA, Meyer RG, Garcia BA, Berger SL.

Mol Cell Biol. 2015 Apr 15;35(8):1433-48. doi: 10.1128/MCB.01328-14. Epub 2015 Feb 17.

PMID:
25691659
7.

Quantitative proteomic analysis of histone modifications.

Huang H, Lin S, Garcia BA, Zhao Y.

Chem Rev. 2015 Mar 25;115(6):2376-418. doi: 10.1021/cr500491u. Epub 2015 Feb 17. No abstract available.

PMID:
25688442
8.

A Specific LSD1/KDM1A Isoform Regulates Neuronal Differentiation through H3K9 Demethylation.

Laurent B, Ruitu L, Murn J, Hempel K, Ferrao R, Xiang Y, Liu S, Garcia BA, Wu H, Wu F, Steen H, Shi Y.

Mol Cell. 2015 Mar 19;57(6):957-70. doi: 10.1016/j.molcel.2015.01.010. Epub 2015 Feb 12.

PMID:
25684206
9.

Drawbacks in the use of unconventional hydrophobic anhydrides for histone derivatization in bottom-up proteomics PTM analysis.

Sidoli S, Yuan ZF, Lin S, Karch K, Wang X, Bhanu N, Arnaudo AM, Britton LM, Cao XJ, Gonzales-Cope M, Han Y, Liu S, Molden RC, Wein S, Afjehi-Sadat L, Garcia BA.

Proteomics. 2015 May;15(9):1459-69. doi: 10.1002/pmic.201400483.

PMID:
25641854
10.

SWATH Analysis for Characterization and Quantification of Histone Post-translational Modifications.

Sidoli S, Lin S, Xiong L, Bhanu NV, Karch KR, Johansen E, Hunter C, Mollah S, Garcia BA.

Mol Cell Proteomics. 2015 Jan 30. pii: mcp.O114.046102. [Epub ahead of print]

11.

The cerebral cavernous malformation pathway controls cardiac development via regulation of endocardial MEKK3 signaling and KLF expression.

Zhou Z, Rawnsley DR, Goddard LM, Pan W, Cao XJ, Jakus Z, Zheng H, Yang J, Arthur JS, Whitehead KJ, Li D, Zhou B, Garcia BA, Zheng X, Kahn ML.

Dev Cell. 2015 Jan 26;32(2):168-80. doi: 10.1016/j.devcel.2014.12.009.

PMID:
25625206
12.

Identification of nuclear hormone receptor pathways causing insulin resistance by transcriptional and epigenomic analysis.

Kang S, Tsai LT, Zhou Y, Evertts A, Xu S, Griffin MJ, Issner R, Whitton HJ, Garcia BA, Epstein CB, Mikkelsen TS, Rosen ED.

Nat Cell Biol. 2015 Jan;17(1):44-56. doi: 10.1038/ncb3080. Epub 2014 Dec 15.

PMID:
25503565
13.

Defining heterochromatin in C. elegans through genome-wide analysis of the heterochromatin protein 1 homolog HPL-2.

Garrigues JM, Sidoli S, Garcia BA, Strome S.

Genome Res. 2015 Jan;25(1):76-88. doi: 10.1101/gr.180489.114. Epub 2014 Dec 2.

PMID:
25467431
14.

Designing a learning health organization for collective impact.

Aragón TJ, Garcia BA; Population Health Division Leadership Team.

J Public Health Manag Pract. 2015 Jan-Feb;21 Suppl 1:S24-33. doi: 10.1097/PHH.0000000000000154. No abstract available.

15.

Selective inhibition of EZH2 and EZH1 enzymatic activity by a small molecule suppresses MLL-rearranged leukemia.

Xu B, On DM, Ma A, Parton T, Konze KD, Pattenden SG, Allison DF, Cai L, Rockowitz S, Liu S, Liu Y, Li F, Vedadi M, Frye SV, Garcia BA, Zheng D, Jin J, Wang GG.

Blood. 2015 Jan 8;125(2):346-57. doi: 10.1182/blood-2014-06-581082. Epub 2014 Nov 13.

PMID:
25395428
16.

BRD4 assists elongation of both coding and enhancer RNAs by interacting with acetylated histones.

Kanno T, Kanno Y, LeRoy G, Campos E, Sun HW, Brooks SR, Vahedi G, Heightman TD, Garcia BA, Reinberg D, Siebenlist U, O'Shea JJ, Ozato K.

Nat Struct Mol Biol. 2014 Dec;21(12):1047-57. doi: 10.1038/nsmb.2912. Epub 2014 Nov 10.

PMID:
25383670
17.

Analytical tools and current challenges in the modern era of neuroepigenomics.

Maze I, Shen L, Zhang B, Garcia BA, Shao N, Mitchell A, Sun H, Akbarian S, Allis CD, Nestler EJ.

Nat Neurosci. 2014 Nov;17(11):1476-90. doi: 10.1038/nn.3816. Epub 2014 Oct 28. Review.

PMID:
25349914
18.

High resolution is not a strict requirement for characterization and quantification of histone post-translational modifications.

Karch KR, Zee BM, Garcia BA.

J Proteome Res. 2014 Dec 5;13(12):6152-9. doi: 10.1021/pr500902f. Epub 2014 Oct 30.

PMID:
25325711
19.

In vivo proximity labeling for the detection of protein-protein and protein-RNA interactions.

Beck DB, Narendra V, Drury WJ 3rd, Casey R, Jansen PW, Yuan ZF, Garcia BA, Vermeulen M, Bonasio R.

J Proteome Res. 2014 Dec 5;13(12):6135-43. doi: 10.1021/pr500196b. Epub 2014 Oct 29.

PMID:
25311790
20.

SnapShot: histone modifications.

Huang H, Sabari BR, Garcia BA, Allis CD, Zhao Y.

Cell. 2014 Oct 9;159(2):458-458.e1. doi: 10.1016/j.cell.2014.09.037. No abstract available.

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