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Results: 1 to 20 of 40

1.

Systematic interaction network filtering identifies CRMP1 as a novel suppressor of huntingtin misfolding and neurotoxicity.

Stroedicke M, Bounab Y, Strempel N, Klockmeier K, Yigit S, Friedrich RP, Chaurasia G, Li S, Hesse F, Riechers SP, Russ J, Nicoletti C, Boeddrich A, Wiglenda T, Haenig C, Schnoegl S, Fournier D, Graham RK, Hayden MR, Sigrist S, Bates GP, Priller J, Andrade-Navarro MA, Futschik ME, Wanker EE.

Genome Res. 2015 May;25(5):701-13. doi: 10.1101/gr.182444.114.

PMID:
25908449
2.

TRIB2 as a biomarker for diagnosis and progression of melanoma.

Hill R, Kalathur RK, Colaço L, Brandão R, Ugurel S, Futschik M, Link W.

Carcinogenesis. 2015 Apr;36(4):469-77. doi: 10.1093/carcin/bgv002. Epub 2015 Jan 13.

PMID:
25586991
3.

A novel phosphatidylinositol 3-kinase (PI3K) inhibitor directs a potent FOXO-dependent, p53-independent cell cycle arrest phenotype characterized by the differential induction of a subset of FOXO-regulated genes.

Hill R, Kalathur RK, Callejas S, Colaço L, Brandão R, Serelde B, Cebriá A, Blanco-Aparicio C, Pastor J, Futschik M, Dopazo A, Link W.

Breast Cancer Res. 2014 Dec 9;16(6):482. doi: 10.1186/s13058-014-0482-y.

4.

Differentially expressed microRNAs in maternal plasma for the noninvasive prenatal diagnosis of Down syndrome (trisomy 21).

Kamhieh-Milz J, Moftah RF, Bal G, Futschik M, Sterzer V, Khorramshahi O, Burow M, Thiel G, Stuke-Sontheimer A, Chaoui R, Kamhieh-Milz S, Salama A.

Biomed Res Int. 2014;2014:402475. doi: 10.1155/2014/402475. Epub 2014 Nov 12.

5.

Toward a systems-level understanding of gene regulatory, protein interaction, and metabolic networks in cyanobacteria.

Hernández-Prieto MA, Semeniuk TA, Futschik ME.

Front Genet. 2014 Jul 2;5:191. doi: 10.3389/fgene.2014.00191. eCollection 2014. Review.

6.

Targeting molecular networks for drug research.

Pinto JP, Machado RS, Xavier JM, Futschik ME.

Front Genet. 2014 Jun 4;5:160. doi: 10.3389/fgene.2014.00160. eCollection 2014. Review.

7.

StemCellNet: an interactive platform for network-oriented investigations in stem cell biology.

Pinto JP, Reddy Kalathur RK, Machado RS, Xavier JM, Bragança J, Futschik ME.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W154-60. doi: 10.1093/nar/gku455. Epub 2014 May 22.

8.

UniHI 7: an enhanced database for retrieval and interactive analysis of human molecular interaction networks.

Kalathur RK, Pinto JP, Hernández-Prieto MA, Machado RS, Almeida D, Chaurasia G, Futschik ME.

Nucleic Acids Res. 2014 Jan;42(Database issue):D408-14. doi: 10.1093/nar/gkt1100. Epub 2013 Nov 8.

9.

Dynamic circadian protein-protein interaction networks predict temporal organization of cellular functions.

Wallach T, Schellenberg K, Maier B, Kalathur RK, Porras P, Wanker EE, Futschik ME, Kramer A.

PLoS Genet. 2013 Mar;9(3):e1003398. doi: 10.1371/journal.pgen.1003398. Epub 2013 Mar 28.

10.

Iron deprivation in Synechocystis: inference of pathways, non-coding RNAs, and regulatory elements from comprehensive expression profiling.

Hernández-Prieto MA, Schön V, Georg J, Barreira L, Varela J, Hess WR, Futschik ME.

G3 (Bethesda). 2012 Dec;2(12):1475-95. doi: 10.1534/g3.112.003863. Epub 2012 Dec 1.

11.

CyanoEXpress: A web database for exploration and visualisation of the integrated transcriptome of cyanobacterium Synechocystis sp. PCC6803.

Hernandez-Prieto MA, Futschik ME.

Bioinformation. 2012;8(13):634-8. doi: 10.6026/97320630008634. Epub 2012 Jul 6.

12.

Huntington's disease and its therapeutic target genes: a global functional profile based on the HD Research Crossroads database.

Kalathur RK, Hernández-Prieto MA, Futschik ME.

BMC Neurol. 2012 Jun 28;12:47. doi: 10.1186/1471-2377-12-47.

13.

The integration and annotation of the human interactome in the UniHI Database.

Chaurasia G, Futschik M.

Methods Mol Biol. 2012;812:175-88. doi: 10.1007/978-1-61779-455-1_10.

PMID:
22218860
14.

Identification of Sc-type ILV6 as a target to reduce diacetyl formation in lager brewers' yeast.

Duong CT, Strack L, Futschik M, Katou Y, Nakao Y, Fujimura T, Shirahige K, Kodama Y, Nevoigt E.

Metab Eng. 2011 Nov;13(6):638-47. doi: 10.1016/j.ymben.2011.07.005. Epub 2011 Aug 3.

PMID:
21824525
15.

Transcriptional profiling of the hematopoietic support of interleukin-stimulated human umbilical vein endothelial cells (HUVECs).

Bal G, Kamhieh-Milz J, Futschik M, Häupl T, Salama A, Moldenhauer A.

Cell Transplant. 2012;21(1):251-67. doi: 10.3727/096368911X580581. Epub 2011 Jun 7.

PMID:
21669038
16.

Interleukin 32 promotes hematopoietic progenitor expansion and attenuates bone marrow cytotoxicity.

Moldenhauer A, Futschik M, Lu H, Helmig M, Götze P, Bal G, Zenke M, Han W, Salama A.

Eur J Immunol. 2011 Jun;41(6):1774-86. doi: 10.1002/eji.201040986. Epub 2011 May 13.

PMID:
21469100
17.

Inferring modules from human protein interactome classes.

Marras E, Travaglione A, Chaurasia G, Futschik M, Capobianco E.

BMC Syst Biol. 2010 Jul 23;4:102. doi: 10.1186/1752-0509-4-102.

18.

Short RNA half-lives in the slow-growing marine cyanobacterium Prochlorococcus.

Steglich C, Lindell D, Futschik M, Rector T, Steen R, Chisholm SW.

Genome Biol. 2010;11(5):R54. doi: 10.1186/gb-2010-11-5-r54. Epub 2010 May 19.

19.

Comparison and consolidation of microarray data sets of human tissue expression.

Russ J, Futschik ME.

BMC Genomics. 2010 May 14;11:305. doi: 10.1186/1471-2164-11-305.

20.

Choreography of the transcriptome, photophysiology, and cell cycle of a minimal photoautotroph, prochlorococcus.

Zinser ER, Lindell D, Johnson ZI, Futschik ME, Steglich C, Coleman ML, Wright MA, Rector T, Steen R, McNulty N, Thompson LR, Chisholm SW.

PLoS One. 2009;4(4):e5135. doi: 10.1371/journal.pone.0005135. Epub 2009 Apr 8.

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