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Results: 1 to 20 of 22

1.

An algebraic view of bacterial genome evolution.

Francis AR.

J Math Biol. 2014 Dec;69(6-7):1693-718. doi: 10.1007/s00285-013-0747-6. Epub 2013 Dec 29.

PMID:
24375264
[PubMed - in process]
2.

Group-theoretic models of the inversion process in bacterial genomes.

Egri-Nagy A, Gebhardt V, Tanaka MM, Francis AR.

J Math Biol. 2014 Jul;69(1):243-65. doi: 10.1007/s00285-013-0702-6. Epub 2013 Jun 23.

PMID:
23793228
[PubMed - in process]
3.

Evolution of variation in presence and absence of genes in bacterial pathways.

Francis AR, Tanaka MM.

BMC Evol Biol. 2012 Apr 20;12:55. doi: 10.1186/1471-2148-12-55.

PMID:
22520826
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A discussion on the process of defining 2-D separation selectivity.

Stevenson PG, Mnatsakanyan M, Francis AR, Shalliker RA.

J Sep Sci. 2010 Jun;33(10):1405-13. doi: 10.1002/jssc.200900779.

PMID:
20309899
[PubMed]
5.

Conditions for the evolution of gene clusters in bacterial genomes.

Ballouz S, Francis AR, Lan R, Tanaka MM.

PLoS Comput Biol. 2010 Feb 12;6(2):e1000672. doi: 10.1371/journal.pcbi.1000672.

PMID:
20168992
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

The epidemiological fitness cost of drug resistance in Mycobacterium tuberculosis.

Luciani F, Sisson SA, Jiang H, Francis AR, Tanaka MM.

Proc Natl Acad Sci U S A. 2009 Aug 25;106(34):14711-5. doi: 10.1073/pnas.0902437106. Epub 2009 Aug 13.

PMID:
19706556
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes.

Reyes JF, Francis AR, Tanaka MM.

BMC Bioinformatics. 2008 Nov 27;9:496. doi: 10.1186/1471-2105-9-496.

PMID:
19036166
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

spolTools: online utilities for analyzing spoligotypes of the Mycobacterium tuberculosis complex.

Tang C, Reyes JF, Luciani F, Francis AR, Tanaka MM.

Bioinformatics. 2008 Oct 15;24(20):2414-5. doi: 10.1093/bioinformatics/btn434. Epub 2008 Aug 18.

PMID:
18710872
[PubMed - indexed for MEDLINE]
Free Article
9.

Interpreting genotype cluster sizes of Mycobacterium tuberculosis isolates typed with IS6110 and spoligotyping.

Luciani F, Francis AR, Tanaka MM.

Infect Genet Evol. 2008 Mar;8(2):182-90. doi: 10.1016/j.meegid.2007.12.004. Epub 2008 Feb 1.

PMID:
18243064
[PubMed - indexed for MEDLINE]
10.

Detecting emerging strains of tuberculosis by using spoligotypes.

Tanaka MM, Francis AR.

Proc Natl Acad Sci U S A. 2006 Oct 10;103(41):15266-71. Epub 2006 Oct 2.

PMID:
17015836
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

An evaluation of indices for quantifying tuberculosis transmission using genotypes of pathogen isolates.

Tanaka MM, Phong R, Francis AR.

BMC Infect Dis. 2006 Jun 7;6:92.

PMID:
16756684
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Using approximate Bayesian computation to estimate tuberculosis transmission parameters from genotype data.

Tanaka MM, Francis AR, Luciani F, Sisson SA.

Genetics. 2006 Jul;173(3):1511-20. Epub 2006 Apr 19.

PMID:
16624908
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Methods of quantifying and visualising outbreaks of tuberculosis using genotypic information.

Tanaka MM, Francis AR.

Infect Genet Evol. 2005 Jan;5(1):35-43.

PMID:
15567137
[PubMed - indexed for MEDLINE]
14.

Changes in Medicaid mean changes for NPs.

Francis AR.

NP News. 1996 Mar-Apr;4(2):1, 4. No abstract available.

PMID:
8932078
[PubMed - indexed for MEDLINE]
15.

Modulating effect of plant flavonoids on the mutagenicity of N-methyl-N'-nitro-N-nitrosoguanidine.

Francis AR, Shetty TK, Bhattacharya RK.

Carcinogenesis. 1989 Oct;10(10):1953-5.

PMID:
2676226
[PubMed - indexed for MEDLINE]
16.

Modification of the mutagenicity of aflatoxin B1 and N-methyl-N'-nitro-N-nitrosoguanidine by certain phenolic compounds.

Francis AR, Shetty TK, Bhattacharya RK.

Cancer Lett. 1989 Jun;45(3):177-82.

PMID:
2499416
[PubMed - indexed for MEDLINE]
17.

Modifying role of dietary factors on the mutagenicity of aflatoxin B1: in vitro effect of sulphur-containing amino acids.

Shetty TK, Francis AR, Bhattacharya RK.

Mutat Res. 1989 Apr;222(4):403-7.

PMID:
2495441
[PubMed - indexed for MEDLINE]
18.

Modifying role of dietary factors on the mutagenicity of aflatoxin B1: in vitro effect of plant flavonoids.

Francis AR, Shetty TK, Bhattacharya RK.

Mutat Res. 1989 Apr;222(4):393-401.

PMID:
2495440
[PubMed - indexed for MEDLINE]
19.

Modifying role of vitamins on the mutagenic action of N-methyl-N'-nitro-N-nitrosoguanidine.

Shetty TK, Francis AR, Bhattacharya RK.

Carcinogenesis. 1988 Aug;9(8):1513-5.

PMID:
3402049
[PubMed - indexed for MEDLINE]
20.

Effect of certain trace elements on the mutagenicity of N-methyl-N'-nitro-N-nitrosoguanidine.

Francis AR, Shetty TK, Bhattacharya RK.

Toxicol Lett. 1988 Aug;42(2):193-8.

PMID:
3043762
[PubMed - indexed for MEDLINE]

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