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Results: 1 to 20 of 156

1.

Evolution of the ribosome at atomic resolution.

Petrov AS, Bernier CR, Hsiao C, Norris AM, Kovacs NA, Waterbury CC, Stepanov VG, Harvey SC, Fox GE, Wartell RM, Hud NV, Williams LD.

Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):10251-6. doi: 10.1073/pnas.1407205111. Epub 2014 Jun 30.

PMID:
24982194
[PubMed - in process]
2.

Draft Genome Sequence of Deinococcus phoenicis, a Novel Strain Isolated during the Phoenix Lander Spacecraft Assembly.

Stepanov VG, Vaishampayan P, Venkateswaran K, Fox GE.

Genome Announc. 2014 Apr 24;2(2). pii: e00301-14. doi: 10.1128/genomeA.00301-14.

PMID:
24762934
[PubMed]
Free PMC Article
3.

Structure determination of noncanonical RNA motifs guided by ¹H NMR chemical shifts.

Sripakdeevong P, Cevec M, Chang AT, Erat MC, Ziegeler M, Zhao Q, Fox GE, Gao X, Kennedy SD, Kierzek R, Nikonowicz EP, Schwalbe H, Sigel RK, Turner DH, Das R.

Nat Methods. 2014 Apr;11(4):413-6. doi: 10.1038/nmeth.2876. Epub 2014 Mar 2.

PMID:
24584194
[PubMed - indexed for MEDLINE]
4.

Secondary structures of rRNAs from all three domains of life.

Petrov AS, Bernier CR, Gulen B, Waterbury CC, Hershkovits E, Hsiao C, Harvey SC, Hud NV, Fox GE, Wartell RM, Williams LD.

PLoS One. 2014 Feb 5;9(2):e88222. doi: 10.1371/journal.pone.0088222. eCollection 2014.

PMID:
24505437
[PubMed - in process]
Free PMC Article
5.

Carl R. Woese, 1928-2012.

Fox GE.

Astrobiology. 2013 Dec;13(12):1201-2. doi: 10.1089/ast.2013.1312. No abstract available.

PMID:
24341461
[PubMed - indexed for MEDLINE]
6.

The singular quest for a universal tree of life.

Sapp J, Fox GE.

Microbiol Mol Biol Rev. 2013 Dec;77(4):541-50. doi: 10.1128/MMBR.00038-13.

PMID:
24296570
[PubMed - indexed for MEDLINE]
7.

Nanometer scale pores similar in size to the entrance of the ribosomal exit cavity are a common feature of large RNAs.

Rivas M, Tran Q, Fox GE.

RNA. 2013 Oct;19(10):1349-54. doi: 10.1261/rna.038828.113. Epub 2013 Aug 12.

PMID:
23940386
[PubMed - indexed for MEDLINE]
8.

An ICEBs1-like element may be associated with the extreme radiation and desiccation resistance of Bacillus pumilus SAFR-032 spores.

Tirumalai MR, Fox GE.

Extremophiles. 2013 Sep;17(5):767-74. doi: 10.1007/s00792-013-0559-z. Epub 2013 Jun 28.

PMID:
23812891
[PubMed - indexed for MEDLINE]
9.

Candidate genes that may be responsible for the unusual resistances exhibited by Bacillus pumilus SAFR-032 spores.

Tirumalai MR, Rastogi R, Zamani N, O'Bryant Williams E, Allen S, Diouf F, Kwende S, Weinstock GM, Venkateswaran KJ, Fox GE.

PLoS One. 2013 Jun 14;8(6):e66012. doi: 10.1371/journal.pone.0066012. Print 2013.

PMID:
23799069
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Secondary structure and domain architecture of the 23S and 5S rRNAs.

Petrov AS, Bernier CR, Hershkovits E, Xue Y, Waterbury CC, Hsiao C, Stepanov VG, Gaucher EA, Grover MA, Harvey SC, Hud NV, Wartell RM, Fox GE, Williams LD.

Nucleic Acids Res. 2013 Aug;41(15):7522-35. doi: 10.1093/nar/gkt513. Epub 2013 Jun 14.

PMID:
23771137
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

UNAC tetraloops: to what extent do they mimic GNRA tetraloops?

Zhao Q, Huang HC, Nagaswamy U, Xia Y, Gao X, Fox GE.

Biopolymers. 2012 Aug;97(8):617-28. doi: 10.1002/bip.22049.

PMID:
22605553
[PubMed - indexed for MEDLINE]
12.

Detection and typing of viruses using broadly sensitive cocktail-PCR and mass spectrometric cataloging: demonstration with dengue virus.

Gijavanekar C, Drabek R, Soni M, Jackson GW, Strych U, Fox GE, Fofanov Y, Willson RC.

J Mol Diagn. 2012 Jul;14(4):402-7. doi: 10.1016/j.jmoldx.2012.02.006. Epub 2012 May 9.

PMID:
22579629
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

An exit cavity was crucial to the polymerase activity of the early ribosome.

Fox GE, Tran Q, Yonath A.

Astrobiology. 2012 Jan;12(1):57-60. doi: 10.1089/ast.2011.0692. Epub 2011 Dec 22.

PMID:
22191510
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Rare target enrichment for ultrasensitive PCR detection using cot-rehybridization and duplex-specific nuclease.

Gijavanekar C, Strych U, Fofanov Y, Fox GE, Willson RC.

Anal Biochem. 2012 Feb 1;421(1):81-5. doi: 10.1016/j.ab.2011.11.010. Epub 2011 Nov 18.

PMID:
22155054
[PubMed - indexed for MEDLINE]
15.

Structural properties of DNA oligomers containing (GACX)(n) and (GAXC)(n) tandem repeats.

Dasgupta I, Gao X, Fox GE.

Biopolymers. 2012 Mar;97(3):155-64. doi: 10.1002/bip.21719. Epub 2011 Sep 22.

PMID:
21953019
[PubMed - indexed for MEDLINE]
16.

Resurrection of an ancestral 5S rRNA.

Lu Q, Fox GE.

BMC Evol Biol. 2011 Jul 22;11:218. doi: 10.1186/1471-2148-11-218.

PMID:
21781330
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Defining 5S rRNA structure space: point mutation data can be used to predict the phenotype of multichange variants.

Nayar M, Fox GE.

Mol Biol Evol. 2011 Sep;28(9):2629-36. doi: 10.1093/molbev/msr090. Epub 2011 Apr 5.

PMID:
21470967
[PubMed - indexed for MEDLINE]
Free Article
18.

PCR detection of nearly any dengue virus strain using a highly sensitive primer 'cocktail'.

Gijavanekar C, Añez-Lingerfelt M, Feng C, Putonti C, Fox GE, Sabo A, Fofanov Y, Willson RC.

FEBS J. 2011 May;278(10):1676-87. doi: 10.1111/j.1742-4658.2011.08091.x. Epub 2011 Apr 18.

PMID:
21410643
[PubMed - indexed for MEDLINE]
19.

Removal of PCR error products and unincorporated primers by metal-chelate affinity chromatography.

Kanakaraj I, Jewell DL, Murphy JC, Fox GE, Willson RC.

PLoS One. 2011 Jan 14;6(1):e14512. doi: 10.1371/journal.pone.0014512.

PMID:
21264292
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

DNAzyme-mediated recovery of small recombinant RNAs from a 5S rRNA-derived chimera expressed in Escherichia coli.

Liu Y, Stepanov VG, Strych U, Willson RC, Jackson GW, Fox GE.

BMC Biotechnol. 2010 Dec 6;10:85. doi: 10.1186/1472-6750-10-85.

PMID:
21134283
[PubMed - indexed for MEDLINE]
Free PMC Article

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