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Targeted genotyping-by-sequencing permits cost-effective identification and discrimination of pasture grass species and cultivars.

Pembleton LW, Drayton MC, Bain M, Baillie RC, Inch C, Spangenberg GC, Wang J, Forster JW, Cogan NO.

Theor Appl Genet. 2016 May;129(5):991-1005. doi: 10.1007/s00122-016-2678-2. Epub 2016 Feb 16.


Design of an F1 hybrid breeding strategy for ryegrasses based on selection of self-incompatibility locus-specific alleles.

Pembleton LW, Shinozuka H, Wang J, Spangenberg GC, Forster JW, Cogan NO.

Front Plant Sci. 2015 Sep 24;6:764. doi: 10.3389/fpls.2015.00764. eCollection 2015.


De novo assembly and characterisation of the field pea transcriptome using RNA-Seq.

Sudheesh S, Sawbridge TI, Cogan NO, Kennedy P, Forster JW, Kaur S.

BMC Genomics. 2015 Aug 16;16:611. doi: 10.1186/s12864-015-1815-7.


Phylogenomics of asexual Epichloƫ fungal endophytes forming associations with perennial ryegrass.

Hettiarachchige IK, Ekanayake PN, Mann RC, Guthridge KM, Sawbridge TI, Spangenberg GC, Forster JW.

BMC Evol Biol. 2015 Apr 24;15:72. doi: 10.1186/s12862-015-0349-6.


A simple method for semi-random DNA amplicon fragmentation using the methylation-dependent restriction enzyme MspJI.

Shinozuka H, Cogan NO, Shinozuka M, Marshall A, Kay P, Lin YH, Spangenberg GC, Forster JW.

BMC Biotechnol. 2015 Apr 11;15:25. doi: 10.1186/s12896-015-0139-7.


Assessment of genetic variation within a global collection of lentil (Lens culinaris Medik.) cultivars and landraces using SNP markers.

Lombardi M, Materne M, Cogan NO, Rodda M, Daetwyler HD, Slater AT, Forster JW, Kaur S.

BMC Genet. 2014 Dec 24;15:150. doi: 10.1186/s12863-014-0150-3.


Improving breeding efficiency in potato using molecular and quantitative genetics.

Slater AT, Cogan NO, Hayes BJ, Schultz L, Dale MF, Bryan GJ, Forster JW.

Theor Appl Genet. 2014 Nov;127(11):2279-92. doi: 10.1007/s00122-014-2386-8. Epub 2014 Sep 4. Review.


SNP discovery and high-density genetic mapping in faba bean (Vicia faba L.) permits identification of QTLs for ascochyta blight resistance.

Kaur S, Kimber RB, Cogan NO, Materne M, Forster JW, Paull JG.

Plant Sci. 2014 Mar;217-218:47-55. doi: 10.1016/j.plantsci.2013.11.014. Epub 2013 Dec 1.


Improving the analysis of low heritability complex traits for enhanced genetic gain in potato.

Slater AT, Wilson GM, Cogan NO, Forster JW, Hayes BJ.

Theor Appl Genet. 2014 Apr;127(4):809-20. doi: 10.1007/s00122-013-2258-7. Epub 2013 Dec 29.


EST-SNP discovery and dense genetic mapping in lentil (Lens culinaris Medik.) enable candidate gene selection for boron tolerance.

Kaur S, Cogan NO, Stephens A, Noy D, Butsch M, Forster JW, Materne M.

Theor Appl Genet. 2014 Mar;127(3):703-13. doi: 10.1007/s00122-013-2252-0. Epub 2013 Dec 27.


Nucleotide diversity of vernalization and flowering-time-related genes in a germplasm collection of meadow fescue (Festuca pratensis Huds. syn. Lolium pratense (Huds.) Darbysh.).

Shinozuka H, Hand ML, Cogan NO, Spangenberg GC, Forster JW.

Ecol Evol. 2013 Nov;3(13):4415-26. doi: 10.1002/ece3.828. Epub 2013 Oct 9.


Phylogenomics of fescue grass-derived fungal endophytes based on selected nuclear genes and the mitochondrial gene complement.

Ekanayake PN, Rabinovich M, Guthridge KM, Spangenberg GC, Forster JW, Sawbridge TI.

BMC Evol Biol. 2013 Dec 12;13:270. doi: 10.1186/1471-2148-13-270.


SNP marker discovery, linkage map construction and identification of QTLs for enhanced salinity tolerance in field pea (Pisum sativum L.).

Leonforte A, Sudheesh S, Cogan NO, Salisbury PA, Nicolas ME, Materne M, Forster JW, Kaur S.

BMC Plant Biol. 2013 Oct 17;13:161. doi: 10.1186/1471-2229-13-161.


StAMPP: an R package for calculation of genetic differentiation and structure of mixed-ploidy level populations.

Pembleton LW, Cogan NO, Forster JW.

Mol Ecol Resour. 2013 Sep;13(5):946-52. doi: 10.1111/1755-0998.12129. Epub 2013 Jun 6.


Plastome Sequence Determination and Comparative Analysis for Members of the Lolium-Festuca Grass Species Complex.

Hand ML, Spangenberg GC, Forster JW, Cogan NO.

G3 (Bethesda). 2013 Mar 11. pii: g3.112.005264v1. doi: 10.1534/g3.112.005264. [Epub ahead of print]


Quantitative Trait Locus (QTL) meta-analysis and comparative genomics for candidate gene prediction in perennial ryegrass (Lolium perenne L.).

Shinozuka H, Cogan NO, Spangenberg GC, Forster JW.

BMC Genet. 2012 Nov 8;13:101. doi: 10.1186/1471-2156-13-101.


Transcriptome sequencing of field pea and faba bean for discovery and validation of SSR genetic markers.

Kaur S, Pembleton LW, Cogan NO, Savin KW, Leonforte T, Paull J, Materne M, Forster JW.

BMC Genomics. 2012 Mar 20;13:104. doi: 10.1186/1471-2164-13-104.


Comparative Genomics in Perennial Ryegrass (Lolium perenne L.): Identification and Characterisation of an Orthologue for the Rice Plant Architecture-Controlling Gene OsABCG5.

Shinozuka H, Cogan NO, Spangenberg GC, Forster JW.

Int J Plant Genomics. 2011;2011:291563. doi: 10.1155/2011/291563. Epub 2011 Sep 15.

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