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Results: 1 to 20 of 36

1.

A Lymph Node Ratio of 10% Is Predictive of Survival in Stage III Colon Cancer: A French Regional Study.

Sabbagh C, Mauvais F, Cosse C, Rebibo L, Joly JP, Dromer D, Aubert C, Carton S, Dron B, Dadamessi I, Maes B, Perrier G, Manaouil D, Fontaine JF, Gozy M, Panis X, Foncelle PH, de Fresnoy H, Leroux F, Vaneslander P, Ghighi C, Regimbeau JM.

Int Surg. 2014 Jul-Aug;99(4):344-53. doi: 10.9738/INTSURG-D-13-00052.1.

PMID:
25058763
[PubMed - in process]
2.

Alkemio: association of chemicals with biomedical topics by text and data mining.

Gijón-Correas JA, Andrade-Navarro MA, Fontaine JF.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W422-9. doi: 10.1093/nar/gku432. Epub 2014 May 16.

PMID:
24838570
[PubMed - in process]
Free Article
3.

[Birch pollen allergy].

Lavaud F, Fore M, Fontaine JF, Pérotin JM, de Blay F.

Rev Mal Respir. 2014 Feb;31(2):150-61. doi: 10.1016/j.rmr.2013.08.006. Epub 2013 Nov 9. Review. French.

PMID:
24602682
[PubMed - in process]
4.

CellFinder: a cell data repository.

Stachelscheid H, Seltmann S, Lekschas F, Fontaine JF, Mah N, Neves M, Andrade-Navarro MA, Leser U, Kurtz A.

Nucleic Acids Res. 2014 Jan;42(Database issue):D950-8. doi: 10.1093/nar/gkt1264. Epub 2013 Dec 3.

PMID:
24304896
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Mutually exclusive signaling signatures define the hepatic and pancreatic progenitor cell lineage divergence.

Rodríguez-Seguel E, Mah N, Naumann H, Pongrac IM, Cerdá-Esteban N, Fontaine JF, Wang Y, Chen W, Andrade-Navarro MA, Spagnoli FM.

Genes Dev. 2013 Sep 1;27(17):1932-46. doi: 10.1101/gad.220244.113.

PMID:
24013505
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

CELDA -- an ontology for the comprehensive representation of cells in complex systems.

Seltmann S, Stachelscheid H, Damaschun A, Jansen L, Lekschas F, Fontaine JF, Nguyen-Dobinsky TN, Leser U, Kurtz A.

BMC Bioinformatics. 2013 Jul 17;14:228. doi: 10.1186/1471-2105-14-228.

PMID:
23865855
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Preliminary evaluation of the CellFinder literature curation pipeline for gene expression in kidney cells and anatomical parts.

Neves M, Damaschun A, Mah N, Lekschas F, Seltmann S, Stachelscheid H, Fontaine JF, Kurtz A, Leser U.

Database (Oxford). 2013 Apr 18;2013:bat020. doi: 10.1093/database/bat020. Print 2013.

PMID:
23599415
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

DNA microarray and miRNA analyses reinforce the classification of follicular thyroid tumors.

Jacques C, Guillotin D, Fontaine JF, Franc B, Mirebeau-Prunier D, Fleury A, Malthiery Y, Savagner F.

J Clin Endocrinol Metab. 2013 May;98(5):E981-9. doi: 10.1210/jc.2012-4006. Epub 2013 Apr 8.

PMID:
23569218
[PubMed - indexed for MEDLINE]
9.

Using cited references to improve the retrieval of related biomedical documents.

Ortuño FM, Rojas I, Andrade-Navarro MA, Fontaine JF.

BMC Bioinformatics. 2013 Mar 27;14:113. doi: 10.1186/1471-2105-14-113.

PMID:
23537461
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Estrogen-related receptor alpha modulates lactate dehydrogenase activity in thyroid tumors.

Mirebeau-Prunier D, Le Pennec S, Jacques C, Fontaine JF, Gueguen N, Boutet-Bouzamondo N, Donnart A, Malthièry Y, Savagner F.

PLoS One. 2013;8(3):e58683. doi: 10.1371/journal.pone.0058683. Epub 2013 Mar 13.

PMID:
23516535
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

CXCL5 limits macrophage foam cell formation in atherosclerosis.

Rousselle A, Qadri F, Leukel L, Yilmaz R, Fontaine JF, Sihn G, Bader M, Ahluwalia A, Duchene J.

J Clin Invest. 2013 Mar 1;123(3):1343-7. doi: 10.1172/JCI66580. Epub 2013 Feb 8.

PMID:
23376791
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Adding protein context to the human protein-protein interaction network to reveal meaningful interactions.

Schaefer MH, Lopes TJ, Mah N, Shoemaker JE, Matsuoka Y, Fontaine JF, Louis-Jeune C, Eisfeld AJ, Neumann G, Perez-Iratxeta C, Kawaoka Y, Kitano H, Andrade-Navarro MA.

PLoS Comput Biol. 2013;9(1):e1002860. doi: 10.1371/journal.pcbi.1002860. Epub 2013 Jan 3.

PMID:
23300433
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Development and application of a DNA microarray-based yeast two-hybrid system.

Suter B, Fontaine JF, Yildirimman R, Raskó T, Schaefer MH, Rasche A, Porras P, Vázquez-Álvarez BM, Russ J, Rau K, Foulle R, Zenkner M, Saar K, Herwig R, Andrade-Navarro MA, Wanker EE.

Nucleic Acids Res. 2013 Feb 1;41(3):1496-507. doi: 10.1093/nar/gks1329. Epub 2012 Dec 28.

PMID:
23275563
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

HIPPIE: Integrating protein interaction networks with experiment based quality scores.

Schaefer MH, Fontaine JF, Vinayagam A, Porras P, Wanker EE, Andrade-Navarro MA.

PLoS One. 2012;7(2):e31826. doi: 10.1371/journal.pone.0031826. Epub 2012 Feb 14.

PMID:
22348130
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.

Krallinger M, Vazquez M, Leitner F, Salgado D, Chatr-Aryamontri A, Winter A, Perfetto L, Briganti L, Licata L, Iannuccelli M, Castagnoli L, Cesareni G, Tyers M, Schneider G, Rinaldi F, Leaman R, Gonzalez G, Matos S, Kim S, Wilbur WJ, Rocha L, Shatkay H, Tendulkar AV, Agarwal S, Liu F, Wang X, Rak R, Noto K, Elkan C, Lu Z, Dogan RI, Fontaine JF, Andrade-Navarro MA, Valencia A.

BMC Bioinformatics. 2011 Oct 3;12 Suppl 8:S3. doi: 10.1186/1471-2105-12-S8-S3.

PMID:
22151929
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries.

Barbosa-Silva A, Fontaine JF, Donnard ER, Stussi F, Ortega JM, Andrade-Navarro MA.

BMC Bioinformatics. 2011 Nov 9;12:435. doi: 10.1186/1471-2105-12-435.

PMID:
22070195
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Tissue-specific subnetworks and characteristics of publicly available human protein interaction databases.

Lopes TJ, Schaefer M, Shoemaker J, Matsuoka Y, Fontaine JF, Neumann G, Andrade-Navarro MA, Kawaoka Y, Kitano H.

Bioinformatics. 2011 Sep 1;27(17):2414-21. doi: 10.1093/bioinformatics/btr414. Epub 2011 Jul 28.

PMID:
21798963
[PubMed - indexed for MEDLINE]
Free Article
18.

Characteristics of patients with respiratory allergy in France and factors influencing immunotherapy prescription: a prospective observational study (REALIS).

Migueres M, Fontaine JF, Haddad T, Grosclaude M, Saint-Martin F, Bem David D, Crestani B.

Int J Immunopathol Pharmacol. 2011 Apr-Jun;24(2):387-400.

PMID:
21658313
[PubMed - indexed for MEDLINE]
19.

Génie: literature-based gene prioritization at multi genomic scale.

Fontaine JF, Priller F, Barbosa-Silva A, Andrade-Navarro MA.

Nucleic Acids Res. 2011 Jul;39(Web Server issue):W455-61. doi: 10.1093/nar/gkr246. Epub 2011 May 23.

PMID:
21609954
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Aversion to nicotine is regulated by the balanced activity of β4 and α5 nicotinic receptor subunits in the medial habenula.

Frahm S, Slimak MA, Ferrarese L, Santos-Torres J, Antolin-Fontes B, Auer S, Filkin S, Pons S, Fontaine JF, Tsetlin V, Maskos U, Ibañez-Tallon I.

Neuron. 2011 May 12;70(3):522-35. doi: 10.1016/j.neuron.2011.04.013.

PMID:
21555077
[PubMed - indexed for MEDLINE]
Free Article

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