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Results: 11

1.

DNA Tetrominoes: The Construction of DNA Nanostructures Using Self-Organised Heterogeneous Deoxyribonucleic Acids Shapes.

Ong HS, Rahim MS, Firdaus-Raih M, Ramlan EI.

PLoS One. 2015 Aug 10;10(8):e0134520. doi: 10.1371/journal.pone.0134520. eCollection 2015.

2.

The genome of the Tiger Milk mushroom, Lignosus rhinocerotis, provides insights into the genetic basis of its medicinal properties.

Yap HY, Chooi YH, Firdaus-Raih M, Fung SY, Ng ST, Tan CS, Tan NH.

BMC Genomics. 2014 Jul 29;15:635. doi: 10.1186/1471-2164-15-635.

3.

COGNAC: a web server for searching and annotating hydrogen-bonded base interactions in RNA three-dimensional structures.

Firdaus-Raih M, Hamdani HY, Nadzirin N, Ramlan EI, Willett P, Artymiuk PJ.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W382-8. doi: 10.1093/nar/gku438. Epub 2014 May 15.

4.

Comparative sequence and structure analysis reveals the conservation and diversity of nucleotide positions and their associated tertiary interactions in the riboswitches.

Appasamy SD, Ramlan EI, Firdaus-Raih M.

PLoS One. 2013 Sep 5;8(9):e73984. doi: 10.1371/journal.pone.0073984. eCollection 2013.

5.

IMAAAGINE: a webserver for searching hypothetical 3D amino acid side chain arrangements in the Protein Data Bank.

Nadzirin N, Willett P, Artymiuk PJ, Firdaus-Raih M.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W432-40. doi: 10.1093/nar/gkt431. Epub 2013 May 28.

6.

Computational discovery and RT-PCR validation of novel Burkholderia conserved and Burkholderia pseudomallei unique sRNAs.

Khoo JS, Chai SF, Mohamed R, Nathan S, Firdaus-Raih M.

BMC Genomics. 2012;13 Suppl 7:S13. doi: 10.1186/1471-2164-13-S7-S13. Epub 2012 Dec 13.

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NASSAM: a server to search for and annotate tertiary interactions and motifs in three-dimensional structures of complex RNA molecules.

Hamdani HY, Appasamy SD, Willett P, Artymiuk PJ, Firdaus-Raih M.

Nucleic Acids Res. 2012 Jul;40(Web Server issue):W35-41. doi: 10.1093/nar/gks513. Epub 2012 May 31.

10.

SPRITE and ASSAM: web servers for side chain 3D-motif searching in protein structures.

Nadzirin N, Gardiner EJ, Willett P, Artymiuk PJ, Firdaus-Raih M.

Nucleic Acids Res. 2012 Jul;40(Web Server issue):W380-6. doi: 10.1093/nar/gks401. Epub 2012 May 9.

11.

Novel base triples in RNA structures revealed by graph theoretical searching methods.

Firdaus-Raih M, Harrison AM, Willett P, Artymiuk PJ.

BMC Bioinformatics. 2011;12 Suppl 13:S2. doi: 10.1186/1471-2105-12-S13-S2. Epub 2011 Nov 30.

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