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Items: 14

1.

Graded Proteasome Dysfunction in Caenorhabditis elegans Activates an Adaptive Response Involving the Conserved SKN-1 and ELT-2 Transcription Factors and the Autophagy-Lysosome Pathway.

Keith SA, Maddux SK, Zhong Y, Chinchankar MN, Ferguson AA, Ghazi A, Fisher AL.

PLoS Genet. 2016 Feb 1;12(2):e1005823. doi: 10.1371/journal.pgen.1005823. eCollection 2016 Feb.

2.

What makes up plant genomes: The vanishing line between transposable elements and genes.

Zhao D, Ferguson AA, Jiang N.

Biochim Biophys Acta. 2016 Feb;1859(2):366-80. doi: 10.1016/j.bbagrm.2015.12.005. Epub 2015 Dec 17. Review.

PMID:
26709091
3.

How Well Do Raters Agree on the Development Stage of Caenorhabditis elegans?

Ferguson AA, Bilonick RA, Buchanich JM, Marsh GM, Fisher AL.

PLoS One. 2015 Jul 14;10(7):e0132365. doi: 10.1371/journal.pone.0132365. eCollection 2015.

4.

TATN-1 mutations reveal a novel role for tyrosine as a metabolic signal that influences developmental decisions and longevity in Caenorhabditis elegans.

Ferguson AA, Roy S, Kormanik KN, Kim Y, Dumas KJ, Ritov VB, Matern D, Hu PJ, Fisher AL.

PLoS Genet. 2013;9(12):e1004020. doi: 10.1371/journal.pgen.1004020. Epub 2013 Dec 19.

5.

Selective acquisition and retention of genomic sequences by Pack-Mutator-like elements based on guanine-cytosine content and the breadth of expression.

Ferguson AA, Zhao D, Jiang N.

Plant Physiol. 2013 Nov;163(3):1419-32. doi: 10.1104/pp.113.223271. Epub 2013 Sep 12.

6.

Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.).

Ming R, VanBuren R, Liu Y, Yang M, Han Y, Li LT, Zhang Q, Kim MJ, Schatz MC, Campbell M, Li J, Bowers JE, Tang H, Lyons E, Ferguson AA, Narzisi G, Nelson DR, Blaby-Haas CE, Gschwend AR, Jiao Y, Der JP, Zeng F, Han J, Min XJ, Hudson KA, Singh R, Grennan AK, Karpowicz SJ, Watling JR, Ito K, Robinson SA, Hudson ME, Yu Q, Mockler TC, Carroll A, Zheng Y, Sunkar R, Jia R, Chen N, Arro J, Wai CM, Wafula E, Spence A, Han Y, Xu L, Zhang J, Peery R, Haus MJ, Xiong W, Walsh JA, Wu J, Wang ML, Zhu YJ, Paull RE, Britt AB, Du C, Downie SR, Schuler MA, Michael TP, Long SP, Ort DR, Schopf JW, Gang DR, Jiang N, Yandell M, dePamphilis CW, Merchant SS, Paterson AH, Buchanan BB, Li S, Shen-Miller J.

Genome Biol. 2013 May 10;14(5):R41. doi: 10.1186/gb-2013-14-5-r41.

7.

Improved vectors for selection of transgenic Caenorhabditis elegans.

Ferguson AA, Cai L, Kashyap L, Fisher AL.

Methods Mol Biol. 2013;940:87-102. doi: 10.1007/978-1-62703-110-3_8.

8.

Mutator-like elements with multiple long terminal inverted repeats in plants.

Ferguson AA, Jiang N.

Comp Funct Genomics. 2012;2012:695827. doi: 10.1155/2012/695827. Epub 2012 Mar 8.

9.

Pack-MULEs: Recycling and reshaping genes through GC-biased acquisition.

Ferguson AA, Jiang N.

Mob Genet Elements. 2011 Jul;1(2):135-138. Epub 2011 Jul 1.

10.

The production of C. elegans transgenes via recombineering with the galK selectable marker.

Zhang Y, Kashyap L, Ferguson AA, Fisher AL.

J Vis Exp. 2011 Jan 11;(47). pii: 2331. doi: 10.3791/2331.

11.

Pack-Mutator-like transposable elements (Pack-MULEs) induce directional modification of genes through biased insertion and DNA acquisition.

Jiang N, Ferguson AA, Slotkin RK, Lisch D.

Proc Natl Acad Sci U S A. 2011 Jan 25;108(4):1537-42. doi: 10.1073/pnas.1010814108. Epub 2011 Jan 10.

12.

Generation of transgenic C. elegans by biolistic transformation.

Hochbaum D, Ferguson AA, Fisher AL.

J Vis Exp. 2010 Aug 23;(42). pii: 2090. doi: 10.3791/2090.

13.

skn-1-Dependent and -independent regulation of aip-1 expression following metabolic stress in Caenorhabditis elegans.

Ferguson AA, Springer MG, Fisher AL.

Mol Cell Biol. 2010 Jun;30(11):2651-67. doi: 10.1128/MCB.01340-09. Epub 2010 Mar 29.

14.

Retrofitting ampicillin resistant vectors by recombination for use in generating C. elegans transgenic animals by bombardment.

Ferguson AA, Fisher AL.

Plasmid. 2009 Sep;62(2):140-5. doi: 10.1016/j.plasmid.2009.06.001. Epub 2009 Jun 9.

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