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Heterochronic meiotic misexpression in an interspecific yeast hybrid.

Swain Lenz D, Riles L, Fay JC.

Mol Biol Evol. 2014 Jun;31(6):1333-42. doi: 10.1093/molbev/msu098. Epub 2014 Mar 7.


The molecular basis of phenotypic variation in yeast.

Fay JC.

Curr Opin Genet Dev. 2013 Dec;23(6):672-7. doi: 10.1016/j.gde.2013.10.005. Epub 2013 Nov 21. Review.


Fine-mapping an association of FSHR with preterm birth in a Finnish population.

Chun S, Plunkett J, Teramo K, Muglia LJ, Fay JC.

PLoS One. 2013 Oct 29;8(10):e78032. doi: 10.1371/journal.pone.0078032. eCollection 2013.


Genomic sequence diversity and population structure of Saccharomyces cerevisiae assessed by RAD-seq.

Cromie GA, Hyma KE, Ludlow CL, Garmendia-Torres C, Gilbert TL, May P, Huang AA, Dudley AM, Fay JC.

G3 (Bethesda). 2013 Dec 9;3(12):2163-71. doi: 10.1534/g3.113.007492.


ZRT1 Harbors an Excess of Nonsynonymous Polymorphism and Shows Evidence of Balancing Selection in Saccharomyces cerevisiae.

Engle EK, Fay JC.

G3 (Bethesda). 2013 Mar 11. pii: g3.112.005082v1. doi: 10.1534/g3.112.005082. [Epub ahead of print]


Mixing of vineyard and oak-tree ecotypes of Saccharomyces cerevisiae in North American vineyards.

Hyma KE, Fay JC.

Mol Ecol. 2013 Jun;22(11):2917-30. doi: 10.1111/mec.12155. Epub 2013 Jan 3.


Tapping into yeast diversity.

Fay JC.

Mol Ecol. 2012 Nov;21(22):5387-9.


A noncomplementation screen for quantitative trait alleles in saccharomyces cerevisiae.

Kim HS, Huh J, Riles L, Reyes A, Fay JC.

G3 (Bethesda). 2012 Jul;2(7):753-60. doi: 10.1534/g3.112.002550. Epub 2012 Jul 1.


Divergence of the yeast transcription factor FZF1 affects sulfite resistance.

Engle EK, Fay JC.

PLoS Genet. 2012;8(6):e1002763. doi: 10.1371/journal.pgen.1002763. Epub 2012 Jun 14.


Divergence in wine characteristics produced by wild and domesticated strains of Saccharomyces cerevisiae.

Hyma KE, Saerens SM, Verstrepen KJ, Fay JC.

FEMS Yeast Res. 2011 Nov;11(7):540-51. doi: 10.1111/j.1567-1364.2011.00746.x. Epub 2011 Sep 2.


Evidence for hitchhiking of deleterious mutations within the human genome.

Chun S, Fay JC.

PLoS Genet. 2011 Aug;7(8):e1002240. doi: 10.1371/journal.pgen.1002240. Epub 2011 Aug 25.


Weighing the evidence for adaptation at the molecular level.

Fay JC.

Trends Genet. 2011 Sep;27(9):343-9. doi: 10.1016/j.tig.2011.06.003. Epub 2011 Jul 19.


Primate-specific evolution of noncoding element insertion into PLA2G4C and human preterm birth.

Plunkett J, Doniger S, Morgan T, Haataja R, Hallman M, Puttonen H, Menon R, Kuczynski E, Norwitz E, Snegovskikh V, Palotie A, Peltonen L, Fellman V, DeFranco EA, Chaudhari BP, Oates J, Boutaud O, McGregor TL, McElroy JJ, Teramo K, Borecki I, Fay JC, Muglia LJ.

BMC Med Genomics. 2010 Dec 24;3:62. doi: 10.1186/1755-8794-3-62.


Is transcription factor binding site turnover a sufficient explanation for cis-regulatory sequence divergence?

Venkataram S, Fay JC.

Genome Biol Evol. 2010;2:851-8. doi: 10.1093/gbe/evq066. Epub 2010 Nov 10.


Preventing preterm birth: the past limitations and new potential of animal models.

Ratajczak CK, Fay JC, Muglia LJ.

Dis Model Mech. 2010 Jul-Aug;3(7-8):407-14. doi: 10.1242/dmm.001701.


Incipient balancing selection through adaptive loss of aquaporins in natural Saccharomyces cerevisiae populations.

Will JL, Kim HS, Clarke J, Painter JC, Fay JC, Gasch AP.

PLoS Genet. 2010 Apr 1;6(4):e1000893. doi: 10.1371/journal.pgen.1000893.


A combined-cross analysis reveals genes with drug-specific and background-dependent effects on drug sensitivity in Saccharomyces cerevisiae.

Kim HS, Fay JC.

Genetics. 2009 Nov;183(3):1141-51. doi: 10.1534/genetics.109.108068. Epub 2009 Aug 31.


Identification of deleterious mutations within three human genomes.

Chun S, Fay JC.

Genome Res. 2009 Sep;19(9):1553-61. doi: 10.1101/gr.092619.109. Epub 2009 Jul 14.


Dissecting the pleiotropic consequences of a quantitative trait nucleotide.

Kim HS, Huh J, Fay JC.

FEMS Yeast Res. 2009 Aug;9(5):713-22. doi: 10.1111/j.1567-1364.2009.00516.x. Epub 2009 Apr 23.


Quantification of rare allelic variants from pooled genomic DNA.

Druley TE, Vallania FL, Wegner DJ, Varley KE, Knowles OL, Bonds JA, Robison SW, Doniger SW, Hamvas A, Cole FS, Fay JC, Mitra RD.

Nat Methods. 2009 Apr;6(4):263-5. doi: 10.1038/nmeth.1307. Epub 2009 Mar 1.

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