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Results: 1 to 20 of 77

1.

Stromal transcriptional profiles reveal hierarchies of anatomical site, serum response and disease and identify disease specific pathways.

Filer A, Antczak P, Parsonage GN, Legault HM, O'Toole M, Pearson MJ, Thomas AM, Scheel-Toellner D, Raza K, Buckley CD, Falciani F.

PLoS One. 2015 Mar 25;10(3):e0120917. doi: 10.1371/journal.pone.0120917. eCollection 2015.

2.

A Bayesian model for the identification of differentially expressed genes in Daphnia magna exposed to munition pollutants.

Cassese A, Guindani M, Antczak P, Falciani F, Vannucci M.

Biometrics. 2015 Mar 13. doi: 10.1111/biom.12303. [Epub ahead of print]

PMID:
25771699
3.

Future water quality monitoring--adapting tools to deal with mixtures of pollutants in water resource management.

Altenburger R, Ait-Aissa S, Antczak P, Backhaus T, Barceló D, Seiler TB, Brion F, Busch W, Chipman K, López de Alda M, Umbuzeiro Gde A, Escher BI, Falciani F, Faust M, Focks A, Hilscherova K, Hollender J, Hollert H, Jäger F, Jahnke A, Kortenkamp A, Krauss M, Lemkine GF, Munthe J, Neumann S, Schymanski EL, Scrimshaw M, Segner H, Slobodnik J, Smedes F, Kughathas S, Teodorovic I, Tindall AJ, Tollefsen KE, Walz KH, Williams TD, Van den Brink PJ, van Gils J, Vrana B, Zhang X, Brack W.

Sci Total Environ. 2015 Apr 15;512-513:540-51. doi: 10.1016/j.scitotenv.2014.12.057. Epub 2015 Jan 31.

PMID:
25644849
4.

Chronic Obstructive Pulmonary Disease heterogeneity: challenges for health risk assessment, stratification and management.

Roca J, Vargas C, Cano I, Selivanov V, Barreiro E, Maier D, Falciani F, Wagner P, Cascante M, Garcia-Aymerich J, Kalko S, De Mas I, Tegnér J, Escarrabill J, Agustí A, Gomez-Cabrero D; Synergy-COPD consortium.

J Transl Med. 2014 Nov 28;12 Suppl 2:S3. doi: 10.1186/1479-5876-12-S2-S3. Epub 2014 Nov 28.

5.

The COPD Knowledge Base: enabling data analysis and computational simulation in translational COPD research.

Cano I, Tényi Á, Schueller C, Wolff M, Huertas Migueláñez MM, Gomez-Cabrero D, Antczak P, Roca J, Cascante M, Falciani F, Maier D.

J Transl Med. 2014 Nov 28;12 Suppl 2:S6. doi: 10.1186/1479-5876-12-S2-S6. Epub 2014 Nov 28.

6.

Systems Medicine: from molecular features and models to the clinic in COPD.

Gomez-Cabrero D, Menche J, Cano I, Abugessaisa I, Huertas-Migueláñez M, Tenyi A, Marin de Mas I, Kiani NA, Marabita F, Falciani F, Burrowes K, Maier D, Wagner P, Selivanov V, Cascante M, Roca J, Barabási AL, Tegnér J.

J Transl Med. 2014 Nov 28;12 Suppl 2:S4. doi: 10.1186/1479-5876-12-S2-S4. Epub 2014 Nov 28.

7.

A systems biology approach reveals a link between systemic cytokines and skeletal muscle energy metabolism in a rodent smoking model and human COPD.

Davidsen PK, Herbert JM, Antczak P, Clarke K, Ferrer E, Peinado VI, Gonzalez C, Roca J, Egginton S, Barberá JA, Falciani F.

Genome Med. 2014 Aug 9;6(8):59. doi: 10.1186/s13073-014-0059-5. eCollection 2014.

8.

The SOLUTIONS project: challenges and responses for present and future emerging pollutants in land and water resources management.

Brack W, Altenburger R, Schüürmann G, Krauss M, López Herráez D, van Gils J, Slobodnik J, Munthe J, Gawlik BM, van Wezel A, Schriks M, Hollender J, Tollefsen KE, Mekenyan O, Dimitrov S, Bunke D, Cousins I, Posthuma L, van den Brink PJ, López de Alda M, Barceló D, Faust M, Kortenkamp A, Scrimshaw M, Ignatova S, Engelen G, Massmann G, Lemkine G, Teodorovic I, Walz KH, Dulio V, Jonker MT, Jäger F, Chipman K, Falciani F, Liska I, Rooke D, Zhang X, Hollert H, Vrana B, Hilscherova K, Kramer K, Neumann S, Hammerbacher R, Backhaus T, Mack J, Segner H, Escher B, de Aragão Umbuzeiro G.

Sci Total Environ. 2015 Jan 15;503-504:22-31. doi: 10.1016/j.scitotenv.2014.05.143. Epub 2014 Jun 18.

PMID:
24951181
9.

A HIERARCHICAL BAYESIAN MODEL FOR INFERENCE OF COPY NUMBER VARIANTS AND THEIR ASSOCIATION TO GENE EXPRESSION.

Cassese A, Guindani M, Tadesse MG, Falciani F, Vannucci M.

Ann Appl Stat. 2014 Mar 1;8(1):148-175.

10.

Silver nanowire exposure results in internalization and toxicity to Daphnia magna.

Scanlan LD, Reed RB, Loguinov AV, Antczak P, Tagmount A, Aloni S, Nowinski DT, Luong P, Tran C, Karunaratne N, Pham D, Lin XX, Falciani F, Higgins CP, Ranville JF, Vulpe CD, Gilbert B.

ACS Nano. 2013 Dec 23;7(12):10681-94. doi: 10.1021/nn4034103. Epub 2013 Dec 5.

11.

Molecular toxicity identification evaluation (mTIE) approach predicts chemical exposure in Daphnia magna.

Antczak P, Jo HJ, Woo S, Scanlan L, Poynton H, Loguinov A, Chan S, Falciani F, Vulpe C.

Environ Sci Technol. 2013 Oct 15;47(20):11747-56. doi: 10.1021/es402819c. Epub 2013 Oct 7.

PMID:
23875995
12.

Gene expression networks underlying ovarian development in wild largemouth bass (Micropterus salmoides).

Martyniuk CJ, Prucha MS, Doperalski NJ, Antczak P, Kroll KJ, Falciani F, Barber DS, Denslow ND.

PLoS One. 2013;8(3):e59093. doi: 10.1371/journal.pone.0059093. Epub 2013 Mar 20.

13.

Germinal center B cells govern their own fate via antibody feedback.

Zhang Y, Meyer-Hermann M, George LA, Figge MT, Khan M, Goodall M, Young SP, Reynolds A, Falciani F, Waisman A, Notley CA, Ehrenstein MR, Kosco-Vilbois M, Toellner KM.

J Exp Med. 2013 Mar 11;210(3):457-64. doi: 10.1084/jem.20120150. Epub 2013 Feb 18.

14.

The experimental renal cell carcinoma model in the chick embryo.

Fergelot P, Bernhard JC, Soulet F, Kilarski WW, Léon C, Courtois N, Deminière C, Herbert JM, Antczak P, Falciani F, Rioux-Leclercq N, Patard JJ, Ferrière JM, Ravaud A, Hagedorn M, Bikfalvi A.

Angiogenesis. 2013 Jan;16(1):181-94. doi: 10.1007/s10456-012-9311-z. Epub 2012 Oct 18.

PMID:
23076651
15.

COMPADRE: an R and web resource for pathway activity analysis by component decompositions.

Ramos-Rodriguez RR, Cuevas-Diaz-Duran R, Falciani F, Tamez-Peña JG, Trevino V.

Bioinformatics. 2012 Oct 15;28(20):2701-2. doi: 10.1093/bioinformatics/bts513. Epub 2012 Aug 24.

16.

Identification and pathway mapping of furan target proteins reveal mitochondrial energy production and redox regulation as critical targets of furan toxicity.

Moro S, Chipman JK, Antczak P, Turan N, Dekant W, Falciani F, Mally A.

Toxicol Sci. 2012 Apr;126(2):336-52. doi: 10.1093/toxsci/kfs005. Epub 2012 Jan 12.

17.

Relative overexpression of X-linked genes in mouse embryonic stem cells is consistent with Ohno's hypothesis.

Lin H, Halsall JA, Antczak P, O'Neill LP, Falciani F, Turner BM.

Nat Genet. 2011 Nov 28;43(12):1169-70; author reply 1171-2. doi: 10.1038/ng.992. No abstract available.

PMID:
22120049
18.

Muscle and blood redox status after exercise training in severe COPD patients.

Rodriguez DA, Kalko S, Puig-Vilanova E, Perez-Olabarría M, Falciani F, Gea J, Cascante M, Barreiro E, Roca J.

Free Radic Biol Med. 2012 Jan 1;52(1):88-94. doi: 10.1016/j.freeradbiomed.2011.09.022. Epub 2011 Oct 4.

PMID:
22064359
19.

A systems biology approach identifies molecular networks defining skeletal muscle abnormalities in chronic obstructive pulmonary disease.

Turan N, Kalko S, Stincone A, Clarke K, Sabah A, Howlett K, Curnow SJ, Rodriguez DA, Cascante M, O'Neill L, Egginton S, Roca J, Falciani F.

PLoS Comput Biol. 2011 Sep;7(9):e1002129. doi: 10.1371/journal.pcbi.1002129. Epub 2011 Sep 1.

20.

Towards a system level understanding of non-model organisms sampled from the environment: a network biology approach.

Williams TD, Turan N, Diab AM, Wu H, Mackenzie C, Bartie KL, Hrydziuszko O, Lyons BP, Stentiford GD, Herbert JM, Abraham JK, Katsiadaki I, Leaver MJ, Taggart JB, George SG, Viant MR, Chipman KJ, Falciani F.

PLoS Comput Biol. 2011 Aug;7(8):e1002126. doi: 10.1371/journal.pcbi.1002126. Epub 2011 Aug 25.

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