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Results: 19

  • The following term was not found in PubMed: Splicing?term=Oct.
1.

Genetic variation and RNA binding proteins: tools and techniques to detect functional polymorphisms.

Soemedi R, Vega H, Belmont JM, Ramachandran S, Fairbrother WG.

Adv Exp Med Biol. 2014;825:227-66. doi: 10.1007/978-1-4939-1221-6_7. Review.

PMID:
25201108
2.

Recessive truncating titin gene, TTN, mutations presenting as centronuclear myopathy.

Ceyhan-Birsoy O, Agrawal PB, Hidalgo C, Schmitz-Abe K, DeChene ET, Swanson LC, Soemedi R, Vasli N, Iannaccone ST, Shieh PB, Shur N, Dennison JM, Lawlor MW, Laporte J, Markianos K, Fairbrother WG, Granzier H, Beggs AH.

Neurology. 2013 Oct 1;81(14):1205-14. doi: 10.1212/WNL.0b013e3182a6ca62. Epub 2013 Aug 23.

3.

ISWI contributes to ArsI insulator function in development of the sea urchin.

Yajima M, Fairbrother WG, Wessel GM.

Development. 2012 Oct;139(19):3613-22. doi: 10.1242/dev.081828.

4.

Large-scale mapping of branchpoints in human pre-mRNA transcripts in vivo.

Taggart AJ, DeSimone AM, Shih JS, Filloux ME, Fairbrother WG.

Nat Struct Mol Biol. 2012 Jun 17;19(7):719-21. doi: 10.1038/nsmb.2327.

5.

Spliceman--a computational web server that predicts sequence variations in pre-mRNA splicing.

Lim KH, Fairbrother WG.

Bioinformatics. 2012 Apr 1;28(7):1031-2. doi: 10.1093/bioinformatics/bts074. Epub 2012 Feb 10.

6.

Association between regulator of G protein signaling 9-2 and body weight.

Waugh JL, Celver J, Sharma M, Dufresne RL, Terzi D, Risch SC, Fairbrother WG, Neve RL, Kane JP, Malloy MJ, Pullinger CR, Gu HF, Tsatsanis C, Hamilton SP, Gold SJ, Zachariou V, Kovoor A.

PLoS One. 2011;6(11):e27984. doi: 10.1371/journal.pone.0027984. Epub 2011 Nov 23.

7.

Using positional distribution to identify splicing elements and predict pre-mRNA processing defects in human genes.

Lim KH, Ferraris L, Filloux ME, Raphael BJ, Fairbrother WG.

Proc Natl Acad Sci U S A. 2011 Jul 5;108(27):11093-8. doi: 10.1073/pnas.1101135108. Epub 2011 Jun 17.

8.

Combinatorial binding of transcription factors in the pluripotency control regions of the genome.

Ferraris L, Stewart AP, Kang J, DeSimone AM, Gemberling M, Tantin D, Fairbrother WG.

Genome Res. 2011 Jul;21(7):1055-64. doi: 10.1101/gr.115824.110. Epub 2011 Apr 28.

9.

High-throughput mapping of protein occupancy identifies functional elements without the restriction of a candidate factor approach.

Ferraris L, Stewart AP, Gemberling MP, Reid DC, Lapadula MJ, Thompson WA, Fairbrother WG.

Nucleic Acids Res. 2011 Mar;39(6):e33. doi: 10.1093/nar/gkq1213. Epub 2010 Dec 17.

10.

High-throughput binding analysis determines the binding specificity of ASF/SF2 on alternatively spliced human pre-mRNAs.

Chang B, Levin J, Thompson WA, Fairbrother WG.

Comb Chem High Throughput Screen. 2010 Mar;13(3):242-52.

11.

Next-generation SELEX identifies sequence and structural determinants of splicing factor binding in human pre-mRNA sequence.

Reid DC, Chang BL, Gunderson SI, Alpert L, Thompson WA, Fairbrother WG.

RNA. 2009 Dec;15(12):2385-97. doi: 10.1261/rna.1821809. Epub 2009 Oct 27.

12.

A general mechanism for transcription regulation by Oct1 and Oct4 in response to genotoxic and oxidative stress.

Kang J, Gemberling M, Nakamura M, Whitby FG, Handa H, Fairbrother WG, Tantin D.

Genes Dev. 2009 Jan 15;23(2):208-22. doi: 10.1101/gad.1750709.

13.

High-throughput biochemical analysis of in vivo location data reveals novel distinct classes of POU5F1(Oct4)/DNA complexes.

Tantin D, Gemberling M, Callister C, Fairbrother WG.

Genome Res. 2008 Apr;18(4):631-9. doi: 10.1101/gr.072942.107. Epub 2008 Jan 22. Erratum in: Genome Res. 2009 Apr;19(4):690. Fairbrother, William [corrected to Fairbrother, William G].

14.

Repressing the neuron within.

Fairbrother WG, Lipscombe D.

Bioessays. 2008 Jan;30(1):1-4. Review. Erratum in: Bioessays. 2009 Apr;31(4):487. Fairbrother, Will [corrected to Fairbrother, William G].

15.

Linking C5 deficiency to an exonic splicing enhancer mutation.

Pfarr N, Prawitt D, Kirschfink M, Schroff C, Knuf M, Habermehl P, Mannhardt W, Zepp F, Fairbrother WG, Loos M, Burge CB, Pohlenz J.

J Immunol. 2005 Apr 1;174(7):4172-7. Erratum in: J Immunol. 2009 Apr 15;182(8):5152. Fairbrother, William [corrected to Fairbrother, William G].

16.

Single nucleotide polymorphism-based validation of exonic splicing enhancers.

Fairbrother WG, Holste D, Burge CB, Sharp PA.

PLoS Biol. 2004 Sep;2(9):E268. Epub 2004 Aug 31.

17.

RESCUE-ESE identifies candidate exonic splicing enhancers in vertebrate exons.

Fairbrother WG, Yeo GW, Yeh R, Goldstein P, Mawson M, Sharp PA, Burge CB.

Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W187-90.

18.

Predictive identification of exonic splicing enhancers in human genes.

Fairbrother WG, Yeh RF, Sharp PA, Burge CB.

Science. 2002 Aug 9;297(5583):1007-13. Epub 2002 Jul 11.

19.

Human genomic sequences that inhibit splicing.

Fairbrother WG, Chasin LA.

Mol Cell Biol. 2000 Sep;20(18):6816-25.

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