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Results: 1 to 20 of 36

1.

The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology.

Galdzicki M, Clancy KP, Oberortner E, Pocock M, Quinn JY, Rodriguez CA, Roehner N, Wilson ML, Adam L, Anderson JC, Bartley BA, Beal J, Chandran D, Chen J, Densmore D, Endy D, Grünberg R, Hallinan J, Hillson NJ, Johnson JD, Kuchinsky A, Lux M, Misirli G, Peccoud J, Plahar HA, Sirin E, Stan GB, Villalobos A, Wipat A, Gennari JH, Myers CJ, Sauro HM.

Nat Biotechnol. 2014 Jun;32(6):545-50. doi: 10.1038/nbt.2891. Epub 2014 Jun 6.

PMID:
24911500
[PubMed - in process]
2.

One-step cloning and chromosomal integration of DNA.

St-Pierre F, Cui L, Priest DG, Endy D, Dodd IB, Shearwin KE.

ACS Synth Biol. 2013 Sep 20;2(9):537-41. doi: 10.1021/sb400021j. Epub 2013 May 20.

PMID:
24050148
[PubMed - indexed for MEDLINE]
3.

Composability of regulatory sequences controlling transcription and translation in Escherichia coli.

Kosuri S, Goodman DB, Cambray G, Mutalik VK, Gao Y, Arkin AP, Endy D, Church GM.

Proc Natl Acad Sci U S A. 2013 Aug 20;110(34):14024-9. doi: 10.1073/pnas.1301301110. Epub 2013 Aug 7.

PMID:
23924614
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A survey of enabling technologies in synthetic biology.

Kahl LJ, Endy D.

J Biol Eng. 2013 May 10;7(1):13. doi: 10.1186/1754-1611-7-13.

PMID:
23663447
[PubMed]
Free PMC Article
5.

Refactored M13 bacteriophage as a platform for tumor cell imaging and drug delivery.

Ghosh D, Kohli AG, Moser F, Endy D, Belcher AM.

ACS Synth Biol. 2012 Dec 21;1(12):576-82. doi: 10.1021/sb300052u. Epub 2012 Sep 24.

PMID:
23656279
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Amplifying genetic logic gates.

Bonnet J, Yin P, Ortiz ME, Subsoontorn P, Endy D.

Science. 2013 May 3;340(6132):599-603. doi: 10.1126/science.1232758. Epub 2013 Mar 28.

PMID:
23539178
[PubMed - indexed for MEDLINE]
Free Article
7.

Measurement and modeling of intrinsic transcription terminators.

Cambray G, Guimaraes JC, Mutalik VK, Lam C, Mai QA, Thimmaiah T, Carothers JM, Arkin AP, Endy D.

Nucleic Acids Res. 2013 May;41(9):5139-48. doi: 10.1093/nar/gkt163. Epub 2013 Mar 19.

PMID:
23511967
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Quantitative estimation of activity and quality for collections of functional genetic elements.

Mutalik VK, Guimaraes JC, Cambray G, Mai QA, Christoffersen MJ, Martin L, Yu A, Lam C, Rodriguez C, Bennett G, Keasling JD, Endy D, Arkin AP.

Nat Methods. 2013 Apr;10(4):347-53. doi: 10.1038/nmeth.2403. Epub 2013 Mar 10.

PMID:
23474467
[PubMed - indexed for MEDLINE]
9.

Precise and reliable gene expression via standard transcription and translation initiation elements.

Mutalik VK, Guimaraes JC, Cambray G, Lam C, Christoffersen MJ, Mai QA, Tran AB, Paull M, Keasling JD, Arkin AP, Endy D.

Nat Methods. 2013 Apr;10(4):354-60. doi: 10.1038/nmeth.2404. Epub 2013 Mar 10.

PMID:
23474465
[PubMed - indexed for MEDLINE]
10.

Switches, switches, every where, in any drop we drink.

Bonnet J, Endy D.

Mol Cell. 2013 Jan 24;49(2):232-3. doi: 10.1016/j.molcel.2013.01.005.

PMID:
23352244
[PubMed]
Free Article
11.

A fully decompressed synthetic bacteriophage øX174 genome assembled and archived in yeast.

Jaschke PR, Lieberman EK, Rodriguez J, Sierra A, Endy D.

Virology. 2012 Dec 20;434(2):278-84. doi: 10.1016/j.virol.2012.09.020. Epub 2012 Oct 15.

PMID:
23079106
[PubMed - indexed for MEDLINE]
Free Article
12.

Engineered cell-cell communication via DNA messaging.

Ortiz ME, Endy D.

J Biol Eng. 2012 Sep 7;6(1):16. doi: 10.1186/1754-1611-6-16.

PMID:
22958599
[PubMed]
Free PMC Article
13.

Rewritable digital data storage in live cells via engineered control of recombination directionality.

Bonnet J, Subsoontorn P, Endy D.

Proc Natl Acad Sci U S A. 2012 Jun 5;109(23):8884-9. doi: 10.1073/pnas.1202344109. Epub 2012 May 21.

PMID:
22615351
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Scaffold number in yeast signaling system sets tradeoff between system output and dynamic range.

Thomson TM, Benjamin KR, Bush A, Love T, Pincus D, Resnekov O, Yu RC, Gordon A, Colman-Lerner A, Endy D, Brent R.

Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):20265-70. doi: 10.1073/pnas.1004042108. Epub 2011 Nov 23.

PMID:
22114196
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Editorial-synthetic biology.

Collins JJ, Endy D, Hutchison CA 3rd, Roberts RJ.

Nucleic Acids Res. 2010 May;38(8):2513. doi: 10.1093/nar/gkq221. No abstract available.

PMID:
20423911
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Gemini, a bifunctional enzymatic and fluorescent reporter of gene expression.

Martin L, Che A, Endy D.

PLoS One. 2009 Nov 4;4(11):e7569. doi: 10.1371/journal.pone.0007569.

PMID:
19888458
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Measuring the activity of BioBrick promoters using an in vivo reference standard.

Kelly JR, Rubin AJ, Davis JH, Ajo-Franklin CM, Cumbers J, Czar MJ, de Mora K, Glieberman AL, Monie DD, Endy D.

J Biol Eng. 2009 Mar 20;3:4. doi: 10.1186/1754-1611-3-4.

PMID:
19298678
[PubMed]
Free PMC Article
18.

Determination of cell fate selection during phage lambda infection.

St-Pierre F, Endy D.

Proc Natl Acad Sci U S A. 2008 Dec 30;105(52):20705-10. doi: 10.1073/pnas.0808831105. Epub 2008 Dec 19.

PMID:
19098103
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The Alpha Project: a model system for systems biology research.

Yu RC, Resnekov O, Abola AP, Andrews SS, Benjamin KR, Bruck J, Burbulis IE, Colman-Lerner A, Endy D, Gordon A, Holl M, Lok L, Pesce CG, Serra E, Smith RD, Thomson TM, Tsong AE, Brent R.

IET Syst Biol. 2008 Sep;2(5):222-33. doi: 10.1049/iet-syb:20080127. Review.

PMID:
19045818
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Refinement and standardization of synthetic biological parts and devices.

Canton B, Labno A, Endy D.

Nat Biotechnol. 2008 Jul;26(7):787-93. doi: 10.1038/nbt1413.

PMID:
18612302
[PubMed - indexed for MEDLINE]

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