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Items: 1 to 20 of 258

1.

Direct estimate of the rate of germline mutation in a bird.

Smeds L, Qvarnstrom A, Ellegren H.

Genome Res. 2016 Jul 13. pii: gr.204669.116. [Epub ahead of print]

2.

Determinants of genetic diversity.

Ellegren H, Galtier N.

Nat Rev Genet. 2016 Jul;17(7):422-33. doi: 10.1038/nrg.2016.58. Epub 2016 Jun 6.

PMID:
27265362
3.

High-Resolution Mapping of Crossover and Non-crossover Recombination Events by Whole-Genome Re-sequencing of an Avian Pedigree.

Smeds L, Mugal CF, Qvarnström A, Ellegren H.

PLoS Genet. 2016 May 24;12(5):e1006044. doi: 10.1371/journal.pgen.1006044. eCollection 2016 May.

4.

Noninvasive genetic sampling reveals intrasex territoriality in wolverines.

Bischof R, Gregersen ER, Brøseth H, Ellegren H, Flagstad Ø.

Ecol Evol. 2016 Feb 9;6(5):1527-36. doi: 10.1002/ece3.1983. eCollection 2016 Mar.

5.

Life History Traits, Protein Evolution, and the Nearly Neutral Theory in Amniotes.

Figuet E, Nabholz B, Bonneau M, Mas Carrio E, Nadachowska-Brzyska K, Ellegren H, Galtier N.

Mol Biol Evol. 2016 Jun;33(6):1517-27. doi: 10.1093/molbev/msw033. Epub 2016 Mar 4.

PMID:
26944704
6.

Divergence in gene expression within and between two closely related flycatcher species.

Uebbing S, Künstner A, Mäkinen H, Backström N, Bolivar P, Burri R, Dutoit L, Mugal CF, Nater A, Aken B, Flicek P, Martin FJ, Searle SM, Ellegren H.

Mol Ecol. 2016 May;25(9):2015-28. doi: 10.1111/mec.13596. Epub 2016 Apr 2.

7.

PSMC analysis of effective population sizes in molecular ecology and its application to black-and-white Ficedula flycatchers.

Nadachowska-Brzyska K, Burri R, Smeds L, Ellegren H.

Mol Ecol. 2016 Mar;25(5):1058-72. doi: 10.1111/mec.13540. Epub 2016 Feb 15.

8.

Whole-genome resequencing of extreme phenotypes in collared flycatchers highlights the difficulty of detecting quantitative trait loci in natural populations.

Kardos M, Husby A, McFarlane SE, Qvarnström A, Ellegren H.

Mol Ecol Resour. 2016 May;16(3):727-41. doi: 10.1111/1755-0998.12498. Epub 2015 Dec 24.

PMID:
26649993
9.

Recombination Rate Variation Modulates Gene Sequence Evolution Mainly via GC-Biased Gene Conversion, Not Hill-Robertson Interference, in an Avian System.

Bolívar P, Mugal CF, Nater A, Ellegren H.

Mol Biol Evol. 2016 Jan;33(1):216-27. doi: 10.1093/molbev/msv214. Epub 2015 Oct 6.

10.
11.

Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers.

Burri R, Nater A, Kawakami T, Mugal CF, Olason PI, Smeds L, Suh A, Dutoit L, Bureš S, Garamszegi LZ, Hogner S, Moreno J, Qvarnström A, Ružić M, Sæther SA, Sætre GP, Török J, Ellegren H.

Genome Res. 2015 Nov;25(11):1656-65. doi: 10.1101/gr.196485.115. Epub 2015 Sep 9.

12.

The Dynamics of Incomplete Lineage Sorting across the Ancient Adaptive Radiation of Neoavian Birds.

Suh A, Smeds L, Ellegren H.

PLoS Biol. 2015 Aug 18;13(8):e1002224. doi: 10.1371/journal.pbio.1002224. eCollection 2015 Aug.

13.

Third Report on Chicken Genes and Chromosomes 2015.

Schmid M, Smith J, Burt DW, Aken BL, Antin PB, Archibald AL, Ashwell C, Blackshear PJ, Boschiero C, Brown CT, Burgess SC, Cheng HH, Chow W, Coble DJ, Cooksey A, Crooijmans RP, Damas J, Davis RV, de Koning DJ, Delany ME, Derrien T, Desta TT, Dunn IC, Dunn M, Ellegren H, Eöry L, Erb I, Farré M, Fasold M, Fleming D, Flicek P, Fowler KE, Frésard L, Froman DP, Garceau V, Gardner PP, Gheyas AA, Griffin DK, Groenen MA, Haaf T, Hanotte O, Hart A, Häsler J, Hedges SB, Hertel J, Howe K, Hubbard A, Hume DA, Kaiser P, Kedra D, Kemp SJ, Klopp C, Kniel KE, Kuo R, Lagarrigue S, Lamont SJ, Larkin DM, Lawal RA, Markland SM, McCarthy F, McCormack HA, McPherson MC, Motegi A, Muljo SA, Münsterberg A, Nag R, Nanda I, Neuberger M, Nitsche A, Notredame C, Noyes H, O'Connor R, O'Hare EA, Oler AJ, Ommeh SC, Pais H, Persia M, Pitel F, Preeyanon L, Prieto Barja P, Pritchett EM, Rhoads DD, Robinson CM, Romanov MN, Rothschild M, Roux PF, Schmidt CJ, Schneider AS, Schwartz MG, Searle SM, Skinner MA, Smith CA, Stadler PF, Steeves TE, Steinlein C, Sun L, Takata M, Ulitsky I, Wang Q, Wang Y, Warren WC, Wood JM, Wragg D, Zhou H.

Cytogenet Genome Res. 2015;145(2):78-179. doi: 10.1159/000430927. Epub 2015 Jul 14. No abstract available.

PMID:
26282327
14.

Resolving Evolutionary Relationships in Closely Related Species with Whole-Genome Sequencing Data.

Nater A, Burri R, Kawakami T, Smeds L, Ellegren H.

Syst Biol. 2015 Nov;64(6):1000-17. doi: 10.1093/sysbio/syv045. Epub 2015 Jul 17.

15.

Quantitative Mass Spectrometry Reveals Partial Translational Regulation for Dosage Compensation in Chicken.

Uebbing S, Konzer A, Xu L, Backström N, Brunström B, Bergquist J, Ellegren H.

Mol Biol Evol. 2015 Oct;32(10):2716-25. doi: 10.1093/molbev/msv147. Epub 2015 Jun 24.

16.

A prezygotic transmission distorter acting equally in female and male zebra finches Taeniopygia guttata.

Knief U, Schielzeth H, Ellegren H, Kempenaers B, Forstmeier W.

Mol Ecol. 2015 Aug;24(15):3846-59. doi: 10.1111/mec.13281. Epub 2015 Jul 17.

PMID:
26087713
17.

Evolutionary analysis of the female-specific avian W chromosome.

Smeds L, Warmuth V, Bolivar P, Uebbing S, Burri R, Suh A, Nater A, Bureš S, Garamszegi LZ, Hogner S, Moreno J, Qvarnström A, Ružić M, Sæther SA, Sætre GP, Török J, Ellegren H.

Nat Commun. 2015 Jun 4;6:7330. doi: 10.1038/ncomms8330.

18.

Temporal Dynamics of Avian Populations during Pleistocene Revealed by Whole-Genome Sequences.

Nadachowska-Brzyska K, Li C, Smeds L, Zhang G, Ellegren H.

Curr Biol. 2015 May 18;25(10):1375-80. doi: 10.1016/j.cub.2015.03.047. Epub 2015 Apr 16.

19.

Genome-wide association mapping in a wild avian population identifies a link between genetic and phenotypic variation in a life-history trait.

Husby A, Kawakami T, Rönnegård L, Smeds L, Ellegren H, Qvarnström A.

Proc Biol Sci. 2015 May 7;282(1806):20150156. doi: 10.1098/rspb.2015.0156.

20.

Phylogenomic analyses data of the avian phylogenomics project.

Jarvis ED, Mirarab S, Aberer AJ, Li B, Houde P, Li C, Ho SY, Faircloth BC, Nabholz B, Howard JT, Suh A, Weber CC, da Fonseca RR, Alfaro-Núñez A, Narula N, Liu L, Burt D, Ellegren H, Edwards SV, Stamatakis A, Mindell DP, Cracraft J, Braun EL, Warnow T, Jun W, Gilbert MT, Zhang G; Avian Phylogenomics Consortium.

Gigascience. 2015 Feb 12;4:4. doi: 10.1186/s13742-014-0038-1. eCollection 2015.

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