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Results: 1 to 20 of 230

1.

Patterns of sequencing coverage bias revealed by ultra-deep sequencing of vertebrate mitochondria.

Ekblom R, Smeds L, Ellegren H.

BMC Genomics. 2014 Jun 12;15:467. doi: 10.1186/1471-2164-15-467.

PMID:
24923674
[PubMed - in process]
Free PMC Article
2.

A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution.

Kawakami T, Smeds L, Backström N, Husby A, Qvarnström A, Mugal CF, Olason P, Ellegren H.

Mol Ecol. 2014 May 26. doi: 10.1111/mec.12810. [Epub ahead of print]

PMID:
24863701
[PubMed - as supplied by publisher]
3.

Estimation of linkage disequilibrium and interspecific gene flow in Ficedula flycatchers by a newly developed 50k single-nucleotide polymorphism array.

Kawakami T, Backström N, Burri R, Husby A, Olason P, Rice AM, Alund M, Qvarnström A, Ellegren H.

Mol Ecol Resour. 2014 Apr 30. doi: 10.1111/1755-0998.12270. [Epub ahead of print]

PMID:
24784959
[PubMed - as supplied by publisher]
4.

Old but not (so) degenerated--slow evolution of largely homomorphic sex chromosomes in ratites.

Yazdi HP, Ellegren H.

Mol Biol Evol. 2014 Jun;31(6):1444-53. doi: 10.1093/molbev/msu101. Epub 2014 Mar 10.

PMID:
24618361
[PubMed - in process]
5.

Demographic divergence history of pied flycatcher and collared flycatcher inferred from whole-genome re-sequencing data.

Nadachowska-Brzyska K, Burri R, Olason PI, Kawakami T, Smeds L, Ellegren H.

PLoS Genet. 2013 Nov;9(11):e1003942. doi: 10.1371/journal.pgen.1003942. Epub 2013 Nov 7.

PMID:
24244198
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genome sequencing and population genomics in non-model organisms.

Ellegren H.

Trends Ecol Evol. 2014 Jan;29(1):51-63. doi: 10.1016/j.tree.2013.09.008. Epub 2013 Oct 17.

PMID:
24139972
[PubMed - in process]
7.

Transcriptome sequencing reveals the character of incomplete dosage compensation across multiple tissues in flycatchers.

Uebbing S, Künstner A, Mäkinen H, Ellegren H.

Genome Biol Evol. 2013;5(8):1555-66. doi: 10.1093/gbe/evt114.

PMID:
23925789
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

An extensive candidate gene approach to speciation: diversity, divergence and linkage disequilibrium in candidate pigmentation genes across the European crow hybrid zone.

Poelstra JW, Ellegren H, Wolf JB.

Heredity (Edinb). 2013 Dec;111(6):467-73. doi: 10.1038/hdy.2013.68. Epub 2013 Jul 24.

PMID:
23881172
[PubMed - indexed for MEDLINE]
9.

Twisted signatures of GC-biased gene conversion embedded in an evolutionary stable karyotype.

Mugal CF, Arndt PF, Ellegren H.

Mol Biol Evol. 2013 Jul;30(7):1700-12. doi: 10.1093/molbev/mst067. Epub 2013 Apr 5.

PMID:
23564940
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Sampling strategies for species trees: the effects on phylogenetic inference of the number of genes, number of individuals, and whether loci are mitochondrial, sex-linked, or autosomal.

Corl A, Ellegren H.

Mol Phylogenet Evol. 2013 May;67(2):358-66. doi: 10.1016/j.ympev.2013.02.002. Epub 2013 Feb 11.

PMID:
23410742
[PubMed - indexed for MEDLINE]
11.

Genome-wide analysis in chicken reveals that local levels of genetic diversity are mainly governed by the rate of recombination.

Mugal CF, Nabholz B, Ellegren H.

BMC Genomics. 2013 Feb 8;14:86. doi: 10.1186/1471-2164-14-86.

PMID:
23394684
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Lack of dosage compensation accompanies the arrested stage of sex chromosome evolution in ostriches.

Adolfsson S, Ellegren H.

Mol Biol Evol. 2013 Apr;30(4):806-10. doi: 10.1093/molbev/mst009. Epub 2013 Jan 16.

PMID:
23329687
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The evolutionary causes and consequences of sex-biased gene expression.

Parsch J, Ellegren H.

Nat Rev Genet. 2013 Feb;14(2):83-7. doi: 10.1038/nrg3376. Review.

PMID:
23329110
[PubMed - indexed for MEDLINE]
14.

Inferring the demographic history of European Ficedula flycatcher populations.

Backström N, Saetre GP, Ellegren H.

BMC Evol Biol. 2013 Jan 2;13:2. doi: 10.1186/1471-2148-13-2.

PMID:
23282063
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The genomic landscape of species divergence in Ficedula flycatchers.

Ellegren H, Smeds L, Burri R, Olason PI, Backström N, Kawakami T, Künstner A, Mäkinen H, Nadachowska-Brzyska K, Qvarnström A, Uebbing S, Wolf JB.

Nature. 2012 Nov 29;491(7426):756-60. doi: 10.1038/nature11584. Epub 2012 Oct 24.

PMID:
23103876
[PubMed - indexed for MEDLINE]
16.

High levels of gene expression explain the strong evolutionary constraint of mitochondrial protein-coding genes.

Nabholz B, Ellegren H, Wolf JB.

Mol Biol Evol. 2013 Feb;30(2):272-84. doi: 10.1093/molbev/mss238. Epub 2012 Oct 15.

PMID:
23071102
[PubMed - indexed for MEDLINE]
Free Article
17.

The genomic signature of sexual selection in the genetic diversity of the sex chromosomes and autosomes.

Corl A, Ellegren H.

Evolution. 2012 Jul;66(7):2138-49. doi: 10.1111/j.1558-5646.2012.01586.x. Epub 2012 Feb 23.

PMID:
22759291
[PubMed - indexed for MEDLINE]
18.

QTL and quantitative genetic analysis of beak morphology reveals patterns of standing genetic variation in an Estrildid finch.

Knief U, Schielzeth H, Kempenaers B, Ellegren H, Forstmeier W.

Mol Ecol. 2012 Aug;21(15):3704-17. doi: 10.1111/j.1365-294X.2012.05661.x. Epub 2012 Jun 13.

PMID:
22694741
[PubMed - indexed for MEDLINE]
19.

Recombination drives vertebrate genome contraction.

Nam K, Ellegren H.

PLoS Genet. 2012;8(5):e1002680. doi: 10.1371/journal.pgen.1002680. Epub 2012 May 3.

PMID:
22570634
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Heterozygosity-fitness correlations in zebra finches: microsatellite markers can be better than their reputation.

Forstmeier W, Schielzeth H, Mueller JC, Ellegren H, Kempenaers B.

Mol Ecol. 2012 Jul;21(13):3237-49. doi: 10.1111/j.1365-294X.2012.05593.x. Epub 2012 May 3.

PMID:
22554318
[PubMed - indexed for MEDLINE]

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