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Results: 1 to 20 of 193

1.

Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition.

Lim YW, Cuevas DA, Silva GG, Aguinaldo K, Dinsdale EA, Haas AF, Hatay M, Sanchez SE, Wegley-Kelly L, Dutilh BE, Harkins TT, Lee CC, Tom W, Sandin SA, Smith JE, Zgliczynski B, Vermeij MJ, Rohwer F, Edwards RA.

PeerJ. 2014 Aug 19;2:e520. doi: 10.7717/peerj.520. eCollection 2014.

PMID:
25177534
[PubMed]
Free PMC Article
2.

The FinO family of bacterial RNA chaperones.

Mark Glover JN, Chaulk SG, Edwards RA, Arthur D, Lu J, Frost LS.

Plasmid. 2014 Aug 4. pii: S0147-619X(14)00056-0. doi: 10.1016/j.plasmid.2014.07.003. [Epub ahead of print]

PMID:
25102058
[PubMed - as supplied by publisher]
3.

Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions.

Dutilh BE, Thompson CC, Vicente AC, Marin MA, Lee C, Silva GG, Schmieder R, Andrade BG, Chimetto L, Cuevas D, Garza DR, Okeke IN, Aboderin AO, Spangler J, Ross T, Dinsdale EA, Thompson FL, Harkins TT, Edwards RA.

BMC Genomics. 2014 Aug 5;15(1):654. doi: 10.1186/1471-2164-15-654.

PMID:
25096633
[PubMed - in process]
Free PMC Article
4.

A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes.

Dutilh BE, Cassman N, McNair K, Sanchez SE, Silva GG, Boling L, Barr JJ, Speth DR, Seguritan V, Aziz RK, Felts B, Dinsdale EA, Mokili JL, Edwards RA.

Nat Commun. 2014 Jul 24;5:4498. doi: 10.1038/ncomms5498.

PMID:
25058116
[PubMed - in process]
5.

Cost effectiveness of a benzodiazepine vs a nonbenzodiazepine-based sedation regimen for mechanically ventilated, critically ill adults.

Bioc JJ, Magee C, Cucchi J, Fraser GL, Dasta JF, Edwards RA, Devlin JW.

J Crit Care. 2014 Oct;29(5):753-7. doi: 10.1016/j.jcrc.2014.05.020. Epub 2014 Jun 4.

PMID:
24996761
[PubMed - in process]
6.

Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors.

Kelly LW, Williams GJ, Barott KL, Carlson CA, Dinsdale EA, Edwards RA, Haas AF, Haynes M, Lim YW, McDole T, Nelson CE, Sala E, Sandin SA, Smith JE, Vermeij MJ, Youle M, Rohwer F.

Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):10227-32. doi: 10.1073/pnas.1403319111. Epub 2014 Jun 30.

PMID:
24982156
[PubMed - in process]
7.

A reflective teaching challenge to motivate educational innovation.

Edwards RA, Kirwin J, Gonyeau M, Matthews SJ, Lancaster J, DiVall M.

Am J Pharm Educ. 2014 Jun 17;78(5):103. doi: 10.5688/ajpe785103.

PMID:
24954943
[PubMed - in process]
Free PMC Article
8.

FOCUS: an alignment-free model to identify organisms in metagenomes using non-negative least squares.

Silva GG, Cuevas DA, Dutilh BE, Edwards RA.

PeerJ. 2014 Jun 5;2:e425. doi: 10.7717/peerj.425. eCollection 2014.

PMID:
24949242
[PubMed]
Free PMC Article
9.

Wnt signaling directs a metabolic program of glycolysis and angiogenesis in colon cancer.

Pate KT, Stringari C, Sprowl-Tanio S, Wang K, TeSlaa T, Hoverter NP, McQuade MM, Garner C, Digman MA, Teitell MA, Edwards RA, Gratton E, Waterman ML.

EMBO J. 2014 Jul 1;33(13):1454-73. doi: 10.15252/embj.201488598. Epub 2014 May 13.

PMID:
24825347
[PubMed - indexed for MEDLINE]
10.

Excited State Photoreaction between the Indole Side Chain of Tryptophan and Halocompounds Generates New Fluorophores and Unique Modifications.

Ladner CL, Tran K, Le M, Turner RJ, Edwards RA.

Photochem Photobiol. 2014 Sep;90(5):1027-33. doi: 10.1111/php.12279. Epub 2014 Apr 17.

PMID:
24738707
[PubMed - in process]
11.

Angiogenic sprouting is regulated by endothelial cell expression of Slug.

Welch-Reardon KM, Ehsan SM, Wang K, Wu N, Newman AC, Romero-Lopez M, Fong AH, George SC, Edwards RA, Hughes CC.

J Cell Sci. 2014 May 1;127(Pt 9):2017-28. doi: 10.1242/jcs.143420. Epub 2014 Feb 19.

PMID:
24554431
[PubMed - in process]
12.

The cytokine IL-22 promotes pathogen colonization by suppressing related commensal bacteria.

Behnsen J, Jellbauer S, Wong CP, Edwards RA, George MD, Ouyang W, Raffatellu M.

Immunity. 2014 Feb 20;40(2):262-73. doi: 10.1016/j.immuni.2014.01.003. Epub 2014 Feb 6.

PMID:
24508234
[PubMed - indexed for MEDLINE]
13.

Using benchmarking techniques and the 2011 maternity practices infant nutrition and care (mPINC) survey to improve performance among peer groups across the United States.

Edwards RA, Dee D, Umer A, Perrine CG, Shealy KR, Grummer-Strawn LM.

J Hum Lact. 2014 Feb;30(1):31-40. doi: 10.1177/0890334413515948.

PMID:
24394963
[PubMed - in process]
14.

Microbial genomic taxonomy.

Thompson CC, Chimetto L, Edwards RA, Swings J, Stackebrandt E, Thompson FL.

BMC Genomics. 2013 Dec 23;14:913. doi: 10.1186/1471-2164-14-913.

PMID:
24365132
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).

Overbeek R, Olson R, Pusch GD, Olsen GJ, Davis JJ, Disz T, Edwards RA, Gerdes S, Parrello B, Shukla M, Vonstein V, Wattam AR, Xia F, Stevens R.

Nucleic Acids Res. 2014 Jan;42(Database issue):D206-14. doi: 10.1093/nar/gkt1226. Epub 2013 Nov 29.

PMID:
24293654
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Combining de novo and reference-guided assembly with scaffold_builder.

Silva GG, Dutilh BE, Matthews TD, Elkins K, Schmieder R, Dinsdale EA, Edwards RA.

Source Code Biol Med. 2013 Nov 22;8(1):23. doi: 10.1186/1751-0473-8-23.

PMID:
24267787
[PubMed]
Free Article
17.

Draft Genome Sequence of the Fish Pathogen Piscirickettsia salmonis.

Eppinger M, McNair K, Zogaj X, Dinsdale EA, Edwards RA, Klose KE.

Genome Announc. 2013 Nov 7;1(6). pii: e00926-13. doi: 10.1128/genomeA.00926-13.

PMID:
24201203
[PubMed]
Free PMC Article
18.

Potential cost avoidance of pharmacy students' patient care activities during advanced pharmacy practice experiences.

Woolley AB, Berds CA 4th, Edwards RA, Copeland D, DiVall MV.

Am J Pharm Educ. 2013 Oct 14;77(8):164. doi: 10.5688/ajpe778164.

PMID:
24159205
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Isolation of primary myofibroblasts from mouse and human colon tissue.

Khalil H, Nie W, Edwards RA, Yoo J.

J Vis Exp. 2013 Oct 12;(80). doi: 10.3791/50611.

PMID:
24145735
[PubMed - indexed for MEDLINE]
20.

Microbes, metagenomes and marine mammals: enabling the next generation of scientist to enter the genomic era.

Edwards RA, Haggerty JM, Cassman N, Busch JC, Aguinaldo K, Chinta S, Vaughn MH, Morey R, Harkins TT, Teiling C, Fredrikson K, Dinsdale EA.

BMC Genomics. 2013 Sep 4;14:600. doi: 10.1186/1471-2164-14-600.

PMID:
24007365
[PubMed - in process]
Free PMC Article

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