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Results: 1 to 20 of 39

1.

An evaluation of genotyping by sequencing (GBS) to map the Breviaristatum-e (ari-e) locus in cultivated barley.

Liu H, Bayer M, Druka A, Russell JR, Hackett CA, Poland J, Ramsay L, Hedley PE, Waugh R.

BMC Genomics. 2014 Feb 6;15:104. doi: 10.1186/1471-2164-15-104.

PMID:
24498911
[PubMed - in process]
Free PMC Article
2.

Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence.

Houston K, McKim SM, Comadran J, Bonar N, Druka I, Uzrek N, Cirillo E, Guzy-Wrobelska J, Collins NC, Halpin C, Hansson M, Dockter C, Druka A, Waugh R.

Proc Natl Acad Sci U S A. 2013 Oct 8;110(41):16675-80. doi: 10.1073/pnas.1311681110. Epub 2013 Sep 24.

PMID:
24065816
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The rpg4-mediated resistance to wheat stem rust (Puccinia graminis) in barley (Hordeum vulgare) requires Rpg5, a second NBS-LRR gene, and an actin depolymerization factor.

Wang X, Richards J, Gross T, Druka A, Kleinhofs A, Steffenson B, Acevedo M, Brueggeman R.

Mol Plant Microbe Interact. 2013 Apr;26(4):407-18. doi: 10.1094/MPMI-06-12-0146-R.

PMID:
23216085
[PubMed - indexed for MEDLINE]
Free Article
4.

Analysis of the barley bract suppression gene Trd1.

Houston K, Druka A, Bonar N, Macaulay M, Lundqvist U, Franckowiak J, Morgante M, Stein N, Waugh R.

Theor Appl Genet. 2012 Jun;125(1):33-45. doi: 10.1007/s00122-012-1814-x. Epub 2012 Mar 7.

PMID:
22395962
[PubMed - indexed for MEDLINE]
5.

Induced mutations in circadian clock regulator Mat-a facilitated short-season adaptation and range extension in cultivated barley.

Zakhrabekova S, Gough SP, Braumann I, Müller AH, Lundqvist J, Ahmann K, Dockter C, Matyszczak I, Kurowska M, Druka A, Waugh R, Graner A, Stein N, Steuernagel B, Lundqvist U, Hansson M.

Proc Natl Acad Sci U S A. 2012 Mar 13;109(11):4326-31. doi: 10.1073/pnas.1113009109. Epub 2012 Feb 27.

PMID:
22371569
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

High resolution mapping of Dense spike-ar (dsp.ar) to the genetic centromere of barley chromosome 7H.

Shahinnia F, Druka A, Franckowiak J, Morgante M, Waugh R, Stein N.

Theor Appl Genet. 2012 Feb;124(2):373-84. doi: 10.1007/s00122-011-1712-7. Epub 2011 Sep 30.

PMID:
21959909
[PubMed - indexed for MEDLINE]
7.

INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1.

Ramsay L, Comadran J, Druka A, Marshall DF, Thomas WT, Macaulay M, MacKenzie K, Simpson C, Fuller J, Bonar N, Hayes PM, Lundqvist U, Franckowiak JD, Close TJ, Muehlbauer GJ, Waugh R.

Nat Genet. 2011 Feb;43(2):169-72. doi: 10.1038/ng.745. Epub 2011 Jan 9.

PMID:
21217754
[PubMed - indexed for MEDLINE]
8.

Genetic dissection of barley morphology and development.

Druka A, Franckowiak J, Lundqvist U, Bonar N, Alexander J, Houston K, Radovic S, Shahinnia F, Vendramin V, Morgante M, Stein N, Waugh R.

Plant Physiol. 2011 Feb;155(2):617-27. doi: 10.1104/pp.110.166249. Epub 2010 Nov 18.

PMID:
21088227
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Differential gene expression in nearly isogenic lines with QTL for partial resistance to Puccinia hordei in barley.

Chen X, Niks RE, Hedley PE, Morris J, Druka A, Marcel TC, Vels A, Waugh R.

BMC Genomics. 2010 Nov 11;11:629. doi: 10.1186/1471-2164-11-629.

PMID:
21070652
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Exploiting induced variation to dissect quantitative traits in barley.

Druka A, Franckowiak J, Lundqvist U, Bonar N, Alexander J, Guzy-Wrobelska J, Ramsay L, Druka I, Grant I, Macaulay M, Vendramin V, Shahinnia F, Radovic S, Houston K, Harrap D, Cardle L, Marshall D, Morgante M, Stein N, Waugh R.

Biochem Soc Trans. 2010 Apr;38(2):683-8. doi: 10.1042/BST0380683. Review.

PMID:
20298243
[PubMed - indexed for MEDLINE]
11.

An eQTL analysis of partial resistance to Puccinia hordei in barley.

Chen X, Hackett CA, Niks RE, Hedley PE, Booth C, Druka A, Marcel TC, Vels A, Bayer M, Milne I, Morris J, Ramsay L, Marshall D, Cardle L, Waugh R.

PLoS One. 2010 Jan 6;5(1):e8598. doi: 10.1371/journal.pone.0008598.

PMID:
20066049
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

[The transcriptome analysis of barley (Hordeum vulgare L.) using the Affymetrix Barley1 GeneChip].

Potokina EK, Druka A, Luo Z, Waugh R, Kearsey MJ.

Genetika. 2009 Nov;45(11):1493-505. Russian.

PMID:
20058796
[PubMed - indexed for MEDLINE]
13.

Expression quantitative trait loci analysis in plants.

Druka A, Potokina E, Luo Z, Jiang N, Chen X, Kearsey M, Waugh R.

Plant Biotechnol J. 2010 Jan;8(1):10-27. doi: 10.1111/j.1467-7652.2009.00460.x. Review.

PMID:
20055957
[PubMed - indexed for MEDLINE]
14.

Development and implementation of high-throughput SNP genotyping in barley.

Close TJ, Bhat PR, Lonardi S, Wu Y, Rostoks N, Ramsay L, Druka A, Stein N, Svensson JT, Wanamaker S, Bozdag S, Roose ML, Moscou MJ, Chao S, Varshney RK, Szucs P, Sato K, Hayes PM, Matthews DE, Kleinhofs A, Muehlbauer GJ, DeYoung J, Marshall DF, Madishetty K, Fenton RD, Condamine P, Graner A, Waugh R.

BMC Genomics. 2009 Dec 4;10:582. doi: 10.1186/1471-2164-10-582.

PMID:
19961604
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Comparative transcriptomics in the Triticeae.

Schreiber AW, Sutton T, Caldo RA, Kalashyan E, Lovell B, Mayo G, Muehlbauer GJ, Druka A, Waugh R, Wise RP, Langridge P, Baumann U.

BMC Genomics. 2009 Jun 29;10:285. doi: 10.1186/1471-2164-10-285.

PMID:
19558723
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Transcript profiling and expression level mapping.

Potokina E, Druka A, Kearsey MJ.

Methods Mol Biol. 2009;513:81-92. doi: 10.1007/978-1-59745-427-8_5.

PMID:
19347647
[PubMed - indexed for MEDLINE]
17.

Robust detection and genotyping of single feature polymorphisms from gene expression data.

Wang M, Hu X, Li G, Leach LJ, Potokina E, Druka A, Waugh R, Kearsey MJ, Luo Z.

PLoS Comput Biol. 2009 Mar;5(3):e1000317. doi: 10.1371/journal.pcbi.1000317. Epub 2009 Mar 13.

PMID:
19282978
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Towards systems genetic analyses in barley: Integration of phenotypic, expression and genotype data into GeneNetwork.

Druka A, Druka I, Centeno AG, Li H, Sun Z, Thomas WT, Bonar N, Steffenson BJ, Ullrich SE, Kleinhofs A, Wise RP, Close TJ, Potokina E, Luo Z, Wagner C, Schweizer GF, Marshall DF, Kearsey MJ, Williams RW, Waugh R.

BMC Genet. 2008 Nov 18;9:73. doi: 10.1186/1471-2156-9-73.

PMID:
19017390
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The stem rust resistance gene Rpg5 encodes a protein with nucleotide-binding-site, leucine-rich, and protein kinase domains.

Brueggeman R, Druka A, Nirmala J, Cavileer T, Drader T, Rostoks N, Mirlohi A, Bennypaul H, Gill U, Kudrna D, Whitelaw C, Kilian A, Han F, Sun Y, Gill K, Steffenson B, Kleinhofs A.

Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14970-5. doi: 10.1073/pnas.0807270105. Epub 2008 Sep 23.

PMID:
18812501
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Tissue-dependent limited pleiotropy affects gene expression in barley.

Potokina E, Druka A, Luo Z, Moscou M, Wise R, Waugh R, Kearsey M.

Plant J. 2008 Oct;56(2):287-96. doi: 10.1111/j.1365-313X.2008.03601.x. Epub 2008 Jul 4.

PMID:
18643973
[PubMed - indexed for MEDLINE]

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