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Items: 4

1.

Local error estimates for adaptive simulation of the Reaction-Diffusion Master Equation via operator splitting.

Hellander A, Lawson MJ, Drawert B, Petzold L.

J Comput Phys. 2014 Jun 1;266:89-100.

2.

Spatial stochastic dynamics enable robust cell polarization.

Lawson MJ, Drawert B, Khammash M, Petzold L, Yi TM.

PLoS Comput Biol. 2013;9(7):e1003139. doi: 10.1371/journal.pcbi.1003139. Epub 2013 Jul 25.

3.

URDME: a modular framework for stochastic simulation of reaction-transport processes in complex geometries.

Drawert B, Engblom S, Hellander A.

BMC Syst Biol. 2012 Jun 22;6:76. doi: 10.1186/1752-0509-6-76.

4.

The diffusive finite state projection algorithm for efficient simulation of the stochastic reaction-diffusion master equation.

Drawert B, Lawson MJ, Petzold L, Khammash M.

J Chem Phys. 2010 Feb 21;132(7):074101. doi: 10.1063/1.3310809.

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