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Results: 20

1.

Transcriptomic and metabolomic analysis of copper stress acclimation in Ectocarpus siliculosus highlights signaling and tolerance mechanisms in brown algae.

Ritter A, Dittami SM, Goulitquer S, Correa JA, Boyen C, Potin P, Tonon T.

BMC Plant Biol. 2014 May 1;14:116. doi: 10.1186/1471-2229-14-116.

PMID:
24885189
[PubMed - in process]
Free PMC Article
2.

A metabolic approach to study algal-bacterial interactions in changing environments.

Dittami SM, Eveillard D, Tonon T.

Mol Ecol. 2014 Apr;23(7):1656-60. doi: 10.1111/mec.12670. Epub 2014 Mar 13.

PMID:
24447216
[PubMed - indexed for MEDLINE]
3.

Microarray testing for the presence of toxic algae monitoring programme in Galicia (NW Spain).

Dittami SM, Pazos Y, Laspra M, Medlin LK.

Environ Sci Pollut Res Int. 2013 Oct;20(10):6778-93. doi: 10.1007/s11356-012-1295-0. Epub 2013 May 11.

PMID:
23660802
[PubMed - indexed for MEDLINE]
4.

Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.

Collén J, Porcel B, Carré W, Ball SG, Chaparro C, Tonon T, Barbeyron T, Michel G, Noel B, Valentin K, Elias M, Artiguenave F, Arun A, Aury JM, Barbosa-Neto JF, Bothwell JH, Bouget FY, Brillet L, Cabello-Hurtado F, Capella-Gutiérrez S, Charrier B, Cladière L, Cock JM, Coelho SM, Colleoni C, Czjzek M, Da Silva C, Delage L, Denoeud F, Deschamps P, Dittami SM, Gabaldón T, Gachon CM, Groisillier A, Hervé C, Jabbari K, Katinka M, Kloareg B, Kowalczyk N, Labadie K, Leblanc C, Lopez PJ, McLachlan DH, Meslet-Cladiere L, Moustafa A, Nehr Z, Nyvall Collén P, Panaud O, Partensky F, Poulain J, Rensing SA, Rousvoal S, Samson G, Symeonidi A, Weissenbach J, Zambounis A, Wincker P, Boyen C.

Proc Natl Acad Sci U S A. 2013 Mar 26;110(13):5247-52. doi: 10.1073/pnas.1221259110. Epub 2013 Mar 15.

PMID:
23503846
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Molecular probes for the detection and identification of ichthyotoxic marine microalgae of the genus Pseudochattonella (Dictyochophyceae, Ochrophyta).

Dittami SM, Riisberg I, Edvardsen B.

Environ Sci Pollut Res Int. 2013 Oct;20(10):6824-37. doi: 10.1007/s11356-012-1402-2. Epub 2013 Jan 30.

PMID:
23361173
[PubMed - indexed for MEDLINE]
6.

Seasonal dynamics of harmful algae in outer Oslofjorden monitored by microarray, qPCR, and microscopy.

Dittami SM, Hostyeva V, Egge ES, Kegel JU, Eikrem W, Edvardsen B.

Environ Sci Pollut Res Int. 2013 Oct;20(10):6719-32. doi: 10.1007/s11356-012-1392-0. Epub 2013 Jan 17.

PMID:
23325054
[PubMed - indexed for MEDLINE]
7.

Molecular probes and microarrays for the detection of toxic algae in the genera Dinophysis and Phalacroma (Dinophyta).

Edvardsen B, Dittami SM, Groben R, Brubak S, Escalera L, Rodríguez F, Reguera B, Chen J, Medlin LK.

Environ Sci Pollut Res Int. 2013 Oct;20(10):6733-50. doi: 10.1007/s11356-012-1403-1. Epub 2012 Dec 21.

PMID:
23263760
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Genomes of extremophile crucifers: new platforms for comparative genomics and beyond.

Dittami SM, Tonon T.

Genome Biol. 2012 Aug 16;13(8):166. [Epub ahead of print]

PMID:
22897896
[PubMed - as supplied by publisher]
Free PMC Article
9.

GPR-Analyzer: a simple tool for quantitative analysis of hierarchical multispecies microarrays.

Dittami SM, Edvardsen B.

Environ Sci Pollut Res Int. 2013 Oct;20(10):6808-15. doi: 10.1007/s11356-012-1051-5. Epub 2012 Jul 6.

PMID:
22767354
[PubMed - indexed for MEDLINE]
10.

Towards deciphering dynamic changes and evolutionary mechanisms involved in the adaptation to low salinities in Ectocarpus (brown algae).

Dittami SM, Gravot A, Goulitquer S, Rousvoal S, Peters AF, Bouchereau A, Boyen C, Tonon T.

Plant J. 2012 Aug;71(3):366-77. doi: 10.1111/j.1365-313X.2012.04982.x. Epub 2012 Jun 11.

PMID:
22394375
[PubMed - indexed for MEDLINE]
11.

Analysis of expressed sequence tags from the marine microalga Pseudochattonella farcimen (Dictyochophyceae).

Dittami SM, Riisberg I, John U, Orr RJ, Jakobsen KS, Edvardsen B.

Protist. 2012 Jan;163(1):143-61. doi: 10.1016/j.protis.2011.07.004. Epub 2011 Aug 5.

PMID:
21820956
[PubMed - indexed for MEDLINE]
Free Article
12.

Mannitol in six autotrophic stramenopiles and Micromonas.

Dittami SM, Aas HT, Paulsen BS, Boyen C, Edvardsen B, Tonon T.

Plant Signal Behav. 2011 Aug;6(8):1237-9. doi: 10.4161/psb.6.8.16404. Epub 2011 Aug 1.

PMID:
21720212
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Integrative analysis of metabolite and transcript abundance during the short-term response to saline and oxidative stress in the brown alga Ectocarpus siliculosus.

Dittami SM, Gravot A, Renault D, Goulitquer S, Eggert A, Bouchereau A, Boyen C, Tonon T.

Plant Cell Environ. 2011 Apr;34(4):629-42. doi: 10.1111/j.1365-3040.2010.02268.x. Epub 2011 Feb 1.

PMID:
21281312
[PubMed - indexed for MEDLINE]
14.

Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae).

Dittami SM, Proux C, Rousvoal S, Peters AF, Cock JM, Coppée JY, Boyen C, Tonon T.

BMC Mol Biol. 2011 Jan 13;12:2. doi: 10.1186/1471-2199-12-2.

PMID:
21226968
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Chlorophyll-binding proteins revisited--a multigenic family of light-harvesting and stress proteins from a brown algal perspective.

Dittami SM, Michel G, Collén J, Boyen C, Tonon T.

BMC Evol Biol. 2010 Nov 26;10:365. doi: 10.1186/1471-2148-10-365.

PMID:
21110855
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Mannitol-1-phosphate dehydrogenase activity in Ectocarpus siliculosus, a key role for mannitol synthesis in brown algae.

Rousvoal S, Groisillier A, Dittami SM, Michel G, Boyen C, Tonon T.

Planta. 2011 Feb;233(2):261-73. doi: 10.1007/s00425-010-1295-6. Epub 2010 Oct 28.

PMID:
20981555
[PubMed - indexed for MEDLINE]
17.

Diurnal oscillations of metabolite abundances and gene analysis provide new insights into central metabolic processes of the brown alga Ectocarpus siliculosus.

Gravot A, Dittami SM, Rousvoal S, Lugan R, Eggert A, Collén J, Boyen C, Bouchereau A, Tonon T.

New Phytol. 2010 Oct;188(1):98-110.

PMID:
20862781
[PubMed - indexed for MEDLINE]
18.

The Ectocarpus genome and the independent evolution of multicellularity in brown algae.

Cock JM, Sterck L, Rouzé P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collén J, Corre E, Da Silva C, Delage L, Delaroque N, Dittami SM, Doulbeau S, Elias M, Farnham G, Gachon CM, Gschloessl B, Heesch S, Jabbari K, Jubin C, Kawai H, Kimura K, Kloareg B, Küpper FC, Lang D, Le Bail A, Leblanc C, Lerouge P, Lohr M, Lopez PJ, Martens C, Maumus F, Michel G, Miranda-Saavedra D, Morales J, Moreau H, Motomura T, Nagasato C, Napoli CA, Nelson DR, Nyvall-Collén P, Peters AF, Pommier C, Potin P, Poulain J, Quesneville H, Read B, Rensing SA, Ritter A, Rousvoal S, Samanta M, Samson G, Schroeder DC, Ségurens B, Strittmatter M, Tonon T, Tregear JW, Valentin K, von Dassow P, Yamagishi T, Van de Peer Y, Wincker P.

Nature. 2010 Jun 3;465(7298):617-21. doi: 10.1038/nature09016.

PMID:
20520714
[PubMed - indexed for MEDLINE]
19.

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress.

Dittami SM, Scornet D, Petit JL, Ségurens B, Da Silva C, Corre E, Dondrup M, Glatting KH, König R, Sterck L, Rouzé P, Van de Peer Y, Cock JM, Boyen C, Tonon T.

Genome Biol. 2009;10(6):R66. doi: 10.1186/gb-2009-10-6-r66. Epub 2009 Jun 16.

PMID:
19531237
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus.

Le Bail A, Dittami SM, de Franco PO, Rousvoal S, Cock MJ, Tonon T, Charrier B.

BMC Mol Biol. 2008 Aug 18;9:75. doi: 10.1186/1471-2199-9-75.

PMID:
18710525
[PubMed - indexed for MEDLINE]
Free PMC Article

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