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Results: 1 to 20 of 29

1.

Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders.

Blanco S, Dietmann S, Flores JV, Hussain S, Kutter C, Humphreys P, Lukk M, Lombard P, Treps L, Popis M, Kellner S, Hölter SM, Garrett L, Wurst W, Becker L, Klopstock T, Fuchs H, Gailus-Durner V, Hrabĕ de Angelis M, Káradóttir RT, Helm M, Ule J, Gleeson JG, Odom DT, Frye M.

EMBO J. 2014 Jul 25. pii: e201489282. [Epub ahead of print]

PMID:
25063673
[PubMed - as supplied by publisher]
Free Article
2.

NANOG amplifies STAT3 activation and they synergistically induce the naive pluripotent program.

Stuart HT, van Oosten AL, Radzisheuskaya A, Martello G, Miller A, Dietmann S, Nichols J, Silva JC.

Curr Biol. 2014 Feb 3;24(3):340-6. doi: 10.1016/j.cub.2013.12.040. Epub 2014 Jan 23.

PMID:
24462001
[PubMed - in process]
Free PMC Article
3.

Genetic exploration of the exit from self-renewal using haploid embryonic stem cells.

Leeb M, Dietmann S, Paramor M, Niwa H, Smith A.

Cell Stem Cell. 2014 Mar 6;14(3):385-93. doi: 10.1016/j.stem.2013.12.008. Epub 2014 Jan 9.

PMID:
24412312
[PubMed - in process]
Free PMC Article
4.

Synergistic Mechanisms of DNA Demethylation during Transition to Ground-State Pluripotency.

Hackett JA, Dietmann S, Murakami K, Down TA, Leitch HG, Surani MA.

Stem Cell Reports. 2013 Dec 17;1(6):518-31. doi: 10.1016/j.stemcr.2013.11.010. eCollection 2013.

PMID:
24371807
[PubMed]
Free PMC Article
5.

Characterizing 5-methylcytosine in the mammalian epitranscriptome.

Hussain S, Aleksic J, Blanco S, Dietmann S, Frye M.

Genome Biol. 2013 Nov 29;14(11):215. [Epub ahead of print]

PMID:
24286375
[PubMed - as supplied by publisher]
Free PMC Article
6.

NSun2-mediated cytosine-5 methylation of vault noncoding RNA determines its processing into regulatory small RNAs.

Hussain S, Sajini AA, Blanco S, Dietmann S, Lombard P, Sugimoto Y, Paramor M, Gleeson JG, Odom DT, Ule J, Frye M.

Cell Rep. 2013 Jul 25;4(2):255-61. doi: 10.1016/j.celrep.2013.06.029. Epub 2013 Jul 18.

PMID:
23871666
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

A tripartite transcription factor network regulates primordial germ cell specification in mice.

Magnúsdóttir E, Dietmann S, Murakami K, Günesdogan U, Tang F, Bao S, Diamanti E, Lao K, Gottgens B, Azim Surani M.

Nat Cell Biol. 2013 Aug;15(8):905-15. doi: 10.1038/ncb2798. Epub 2013 Jul 14.

PMID:
23851488
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Exit from pluripotency is gated by intracellular redistribution of the bHLH transcription factor Tfe3.

Betschinger J, Nichols J, Dietmann S, Corrin PD, Paddison PJ, Smith A.

Cell. 2013 Apr 11;153(2):335-47. doi: 10.1016/j.cell.2013.03.012.

PMID:
23582324
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

NANOG-dependent function of TET1 and TET2 in establishment of pluripotency.

Costa Y, Ding J, Theunissen TW, Faiola F, Hore TA, Shliaha PV, Fidalgo M, Saunders A, Lawrence M, Dietmann S, Das S, Levasseur DN, Li Z, Xu M, Reik W, Silva JC, Wang J.

Nature. 2013 Mar 21;495(7441):370-4. doi: 10.1038/nature11925. Epub 2013 Feb 10.

PMID:
23395962
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

MicroRNAs coordinately regulate protein complexes.

Sass S, Dietmann S, Burk UC, Brabletz S, Lutter D, Kowarsch A, Mayer KF, Brabletz T, Ruepp A, Theis FJ, Wang Y.

BMC Syst Biol. 2011 Aug 25;5:136. doi: 10.1186/1752-0509-5-136.

PMID:
21867514
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

CCancer: a bird's eye view on gene lists reported in cancer-related studies.

Dietmann S, Lee W, Wong P, Rodchenkov I, Antonov AV.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W118-23. doi: 10.1093/nar/gkq515. Epub 2010 Jun 6.

PMID:
20529879
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

R spider: a network-based analysis of gene lists by combining signaling and metabolic pathways from Reactome and KEGG databases.

Antonov AV, Schmidt EE, Dietmann S, Krestyaninova M, Hermjakob H.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W78-83. doi: 10.1093/nar/gkq482. Epub 2010 Jun 2.

PMID:
20519200
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The ancient mammalian KRAB zinc finger gene cluster on human chromosome 8q24.3 illustrates principles of C2H2 zinc finger evolution associated with unique expression profiles in human tissues.

Lorenz P, Dietmann S, Wilhelm T, Koczan D, Autran S, Gad S, Wen G, Ding G, Li Y, Rousseau-Merck MF, Thiesen HJ.

BMC Genomics. 2010 Mar 26;11:206. doi: 10.1186/1471-2164-11-206.

PMID:
20346131
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists.

Antonov AV, Dietmann S, Wong P, Lutter D, Mewes HW.

Nucleic Acids Res. 2009 Jul;37(Web Server issue):W323-8. doi: 10.1093/nar/gkp313. Epub 2009 May 6.

PMID:
19420064
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

PPI spider: a tool for the interpretation of proteomics data in the context of protein-protein interaction networks.

Antonov AV, Dietmann S, Rodchenkov I, Mewes HW.

Proteomics. 2009 May;9(10):2740-9. doi: 10.1002/pmic.200800612.

PMID:
19405022
[PubMed - indexed for MEDLINE]
16.

TICL--a web tool for network-based interpretation of compound lists inferred by high-throughput metabolomics.

Antonov AV, Dietmann S, Wong P, Mewes HW.

FEBS J. 2009 Apr;276(7):2084-94. doi: 10.1111/j.1742-4658.2009.06943.x.

PMID:
19292876
[PubMed - indexed for MEDLINE]
17.

PLIPS, an automatically collected database of protein lists reported by proteomics studies.

Antonov AV, Dietmann S, Wong P, Igor R, Mewes HW.

J Proteome Res. 2009 Mar;8(3):1193-7. doi: 10.1021/pr800804d.

PMID:
19216535
[PubMed - indexed for MEDLINE]
18.

Enumeration of condition-dependent dense modules in protein interaction networks.

Georgii E, Dietmann S, Uno T, Pagel P, Tsuda K.

Bioinformatics. 2009 Apr 1;25(7):933-40. doi: 10.1093/bioinformatics/btp080. Epub 2009 Feb 11.

PMID:
19213739
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The DICS repository: module-assisted analysis of disease-related gene lists.

Dietmann S, Georgii E, Antonov A, Tsuda K, Mewes HW.

Bioinformatics. 2009 Mar 15;25(6):830-1. doi: 10.1093/bioinformatics/btp055. Epub 2009 Jan 28.

PMID:
19176557
[PubMed - indexed for MEDLINE]
Free Article
20.

KEGG spider: interpretation of genomics data in the context of the global gene metabolic network.

Antonov AV, Dietmann S, Mewes HW.

Genome Biol. 2008;9(12):R179. doi: 10.1186/gb-2008-9-12-r179. Epub 2008 Dec 18.

PMID:
19094223
[PubMed - indexed for MEDLINE]
Free PMC Article

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