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Items: 19

1.

Genome-wide single nucleotide polymorphism (SNP) discovery in Atlantic salmon (Salmo salar): validation in wild and farmed American and European populations.

Yáñez JM, Naswa S, López ME, Bassini L, Correa K, Gilbey J, Bernatchez L, Norris A, Neira R, Lhorente JP, Schnable PS, Newman S, Mileham A, Deeb N, Di Genova A, Maass A.

Mol Ecol Resour. 2016 Feb 5. doi: 10.1111/1755-0998.12503. [Epub ahead of print]

PMID:
26849107
2.

Genome-wide association analysis reveals loci associated with resistance against Piscirickettsia salmonis in two Atlantic salmon (Salmo salar L.) chromosomes.

Correa K, Lhorente JP, López ME, Bassini L, Naswa S, Deeb N, Di Genova A, Maass A, Davidson WS, Yáñez JM.

BMC Genomics. 2015 Oct 24;16(1):854. doi: 10.1186/s12864-015-2038-7.

3.

The BioMart community portal: an innovative alternative to large, centralized data repositories.

Smedley D, Haider S, Durinck S, Pandini L, Provero P, Allen J, Arnaiz O, Awedh MH, Baldock R, Barbiera G, Bardou P, Beck T, Blake A, Bonierbale M, Brookes AJ, Bucci G, Buetti I, Burge S, Cabau C, Carlson JW, Chelala C, Chrysostomou C, Cittaro D, Collin O, Cordova R, Cutts RJ, Dassi E, Di Genova A, Djari A, Esposito A, Estrella H, Eyras E, Fernandez-Banet J, Forbes S, Free RC, Fujisawa T, Gadaleta E, Garcia-Manteiga JM, Goodstein D, Gray K, Guerra-Assunção JA, Haggarty B, Han DJ, Han BW, Harris T, Harshbarger J, Hastings RK, Hayes RD, Hoede C, Hu S, Hu ZL, Hutchins L, Kan Z, Kawaji H, Keliet A, Kerhornou A, Kim S, Kinsella R, Klopp C, Kong L, Lawson D, Lazarevic D, Lee JH, Letellier T, Li CY, Lio P, Liu CJ, Luo J, Maass A, Mariette J, Maurel T, Merella S, Mohamed AM, Moreews F, Nabihoudine I, Ndegwa N, Noirot C, Perez-Llamas C, Primig M, Quattrone A, Quesneville H, Rambaldi D, Reecy J, Riba M, Rosanoff S, Saddiq AA, Salas E, Sallou O, Shepherd R, Simon R, Sperling L, Spooner W, Staines DM, Steinbach D, Stone K, Stupka E, Teague JW, Dayem Ullah AZ, Wang J, Ware D, Wong-Erasmus M, Youens-Clark K, Zadissa A, Zhang SJ, Kasprzyk A.

Nucleic Acids Res. 2015 Jul 1;43(W1):W589-98. doi: 10.1093/nar/gkv350. Epub 2015 Apr 20.

4.

A new genome of Acidithiobacillus thiooxidans provides insights into adaptation to a bioleaching environment.

Travisany D, Cortés MP, Latorre M, Di Genova A, Budinich M, Bobadilla-Fazzini RA, Parada P, González M, Maass A.

Res Microbiol. 2014 Nov;165(9):743-52. doi: 10.1016/j.resmic.2014.08.004. Epub 2014 Aug 19.

PMID:
25148779
5.

Whole genome comparison between table and wine grapes reveals a comprehensive catalog of structural variants.

Di Genova A, Almeida AM, Muñoz-Espinoza C, Vizoso P, Travisany D, Moraga C, Pinto M, Hinrichsen P, Orellana A, Maass A.

BMC Plant Biol. 2014 Jan 7;14:7. doi: 10.1186/1471-2229-14-7.

6.

Identification of two putative reference genes from grapevine suitable for gene expression analysis in berry and related tissues derived from RNA-Seq data.

González-Agüero M, García-Rojas M, Di Genova A, Correa J, Maass A, Orellana A, Hinrichsen P.

BMC Genomics. 2013 Dec 13;14:878. doi: 10.1186/1471-2164-14-878.

7.

Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps.

Sharma SK, Bolser D, de Boer J, Sønderkær M, Amoros W, Carboni MF, D'Ambrosio JM, de la Cruz G, Di Genova A, Douches DS, Eguiluz M, Guo X, Guzman F, Hackett CA, Hamilton JP, Li G, Li Y, Lozano R, Maass A, Marshall D, Martinez D, McLean K, Mejía N, Milne L, Munive S, Nagy I, Ponce O, Ramirez M, Simon R, Thomson SJ, Torres Y, Waugh R, Zhang Z, Huang S, Visser RG, Bachem CW, Sagredo B, Feingold SE, Orjeda G, Veilleux RE, Bonierbale M, Jacobs JM, Milbourne D, Martin DM, Bryan GJ.

G3 (Bethesda). 2013 Nov 6;3(11):2031-47. doi: 10.1534/g3.113.007153.

8.

Cdk5 regulates Rap1 activity.

Utreras E, Henriquez D, Contreras-Vallejos E, Olmos C, Di Genova A, Maass A, Kulkarni AB, Gonzalez-Billault C.

Neurochem Int. 2013 May;62(6):848-53. doi: 10.1016/j.neuint.2013.02.011. Epub 2013 Feb 13.

9.

Bioinformatic survey for new physiological substrates of Cyclin-dependent kinase 5.

Bórquez DA, Olmos C, Álvarez S, Di Genova A, Maass A, González-Billault C.

Genomics. 2013 Apr;101(4):221-8. doi: 10.1016/j.ygeno.2013.01.003. Epub 2013 Feb 4.

10.

Draft genome sequence of the Sulfobacillus thermosulfidooxidans Cutipay strain, an indigenous bacterium isolated from a naturally extreme mining environment in Northern Chile.

Travisany D, Di Genova A, Sepúlveda A, Bobadilla-Fazzini RA, Parada P, Maass A.

J Bacteriol. 2012 Nov;194(22):6327-8. doi: 10.1128/JB.01622-12.

11.

The SCID-II and DIB-R interviews: diagnostic association with poor outcome risk factors in Borderline Personality Disorder.

Andión Ó, Ferrer M, Di Genova A, Calvo N, Gancedo B, Matalí J, Valero S, Torrubia R, Casas M.

Psicothema. 2012 Nov;24(4):523-8.

PMID:
23079346
12.

Exploring the clinical validity of borderline personality disorder components.

Andión O, Ferrer M, Calvo N, Gancedo B, Barral C, Di Genova A, Arbos MA, Torrubia R, Casas M.

Compr Psychiatry. 2013 Jan;54(1):34-40. doi: 10.1016/j.comppsych.2012.06.004. Epub 2012 Jul 13.

PMID:
22794943
13.

Effectiveness of combined individual and group dialectical behavior therapy compared to only individual dialectical behavior therapy: a preliminary study.

Andión Ó, Ferrer M, Matali J, Gancedo B, Calvo N, Barral C, Valero S, Di Genova A, Diener MJ, Torrubia R, Casas M.

Psychotherapy (Chic). 2012 Jun;49(2):241-50. doi: 10.1037/a0027401.

PMID:
22642527
14.

Borderline Personality Disorder (BPD) diagnosis with the self-report Personality Diagnostic Questionnaire–4+(PDQ-4+): confirmation of the 3-factor structure.

Calvo N, Andión O, Gancedo B, Ferrer M, Barral C, Di Genova A, Torrubia R, Casas M.

Actas Esp Psiquiatr. 2012 Mar-Apr;40(2):57-62. Epub 2012 Mar 1.

15.

SalmonDB: a bioinformatics resource for Salmo salar and Oncorhynchus mykiss.

Di Génova A, Aravena A, Zapata L, González M, Maass A, Iturra P.

Database (Oxford). 2011 Nov 26;2011:bar050. doi: 10.1093/database/bar050. Print 2011.

16.

BioMart Central Portal: an open database network for the biological community.

Guberman JM, Ai J, Arnaiz O, Baran J, Blake A, Baldock R, Chelala C, Croft D, Cros A, Cutts RJ, Di Génova A, Forbes S, Fujisawa T, Gadaleta E, Goodstein DM, Gundem G, Haggarty B, Haider S, Hall M, Harris T, Haw R, Hu S, Hubbard S, Hsu J, Iyer V, Jones P, Katayama T, Kinsella R, Kong L, Lawson D, Liang Y, Lopez-Bigas N, Luo J, Lush M, Mason J, Moreews F, Ndegwa N, Oakley D, Perez-Llamas C, Primig M, Rivkin E, Rosanoff S, Shepherd R, Simon R, Skarnes B, Smedley D, Sperling L, Spooner W, Stevenson P, Stone K, Teague J, Wang J, Wang J, Whitty B, Wong DT, Wong-Erasmus M, Yao L, Youens-Clark K, Yung C, Zhang J, Kasprzyk A.

Database (Oxford). 2011 Sep 18;2011:bar041. doi: 10.1093/database/bar041. Print 2011.

17.

Genome wide identification of Acidithiobacillus ferrooxidans (ATCC 23270) transcription factors and comparative analysis of ArsR and MerR metal regulators.

Hödar C, Moreno P, di Genova A, Latorre M, Reyes-Jara A, Maass A, González M, Cambiazo V.

Biometals. 2012 Feb;25(1):75-93. doi: 10.1007/s10534-011-9484-8. Epub 2011 Aug 10.

PMID:
21830017
18.

Genome sequence and analysis of the tuber crop potato.

Potato Genome Sequencing Consortium, Xu X, Pan S, Cheng S, Zhang B, Mu D, Ni P, Zhang G, Yang S, Li R, Wang J, Orjeda G, Guzman F, Torres M, Lozano R, Ponce O, Martinez D, De la Cruz G, Chakrabarti SK, Patil VU, Skryabin KG, Kuznetsov BB, Ravin NV, Kolganova TV, Beletsky AV, Mardanov AV, Di Genova A, Bolser DM, Martin DM, Li G, Yang Y, Kuang H, Hu Q, Xiong X, Bishop GJ, Sagredo B, Mejía N, Zagorski W, Gromadka R, Gawor J, Szczesny P, Huang S, Zhang Z, Liang C, He J, Li Y, He Y, Xu J, Zhang Y, Xie B, Du Y, Qu D, Bonierbale M, Ghislain M, Herrera Mdel R, Giuliano G, Pietrella M, Perrotta G, Facella P, O'Brien K, Feingold SE, Barreiro LE, Massa GA, Diambra L, Whitty BR, Vaillancourt B, Lin H, Massa AN, Geoffroy M, Lundback S, DellaPenna D, Buell CR, Sharma SK, Marshall DF, Waugh R, Bryan GJ, Destefanis M, Nagy I, Milbourne D, Thomson SJ, Fiers M, Jacobs JM, Nielsen KL, Sønderkær M, Iovene M, Torres GA, Jiang J, Veilleux RE, Bachem CW, de Boer J, Borm T, Kloosterman B, van Eck H, Datema E, Hekkert Bt, Goverse A, van Ham RC, Visser RG.

Nature. 2011 Jul 10;475(7355):189-95. doi: 10.1038/nature10158.

PMID:
21743474
19.

Relationship of good and poor Wisconsin Card Sorting Test performance to illness duration in schizophrenia: a cross-sectional analysis.

Stratta P, Arduini L, Daneluzzo E, Rinaldi O, di Genova A, Rossi A.

Psychiatry Res. 2004 Jan 1;121(3):219-27.

PMID:
14675741
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