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Results: 14

1.

Pharmacological and genomic profiling identifies NF-κB-targeted treatment strategies for mantle cell lymphoma.

Rahal R, Frick M, Romero R, Korn JM, Kridel R, Chan FC, Meissner B, Bhang HE, Ruddy D, Kauffmann A, Farsidjani A, Derti A, Rakiec D, Naylor T, Pfister E, Kovats S, Kim S, Dietze K, Dörken B, Steidl C, Tzankov A, Hummel M, Monahan J, Morrissey MP, Fritsch C, Sellers WR, Cooke VG, Gascoyne RD, Lenz G, Stegmeier F.

Nat Med. 2014 Jan;20(1):87-92. doi: 10.1038/nm.3435. Epub 2013 Dec 22.

PMID:
24362935
[PubMed - indexed for MEDLINE]
2.
3.

A quantitative atlas of polyadenylation in five mammals.

Derti A, Garrett-Engele P, Macisaac KD, Stevens RC, Sriram S, Chen R, Rohl CA, Johnson JM, Babak T.

Genome Res. 2012 Jun;22(6):1173-83. doi: 10.1101/gr.132563.111. Epub 2012 Mar 27.

PMID:
22454233
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Genome analysis reveals interplay between 5'UTR introns and nuclear mRNA export for secretory and mitochondrial genes.

Cenik C, Chua HN, Zhang H, Tarnawsky SP, Akef A, Derti A, Tasan M, Moore MJ, Palazzo AF, Roth FP.

PLoS Genet. 2011 Apr;7(4):e1001366. doi: 10.1371/journal.pgen.1001366. Epub 2011 Apr 14.

PMID:
21533221
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Absence of evidence for MHC-dependent mate selection within HapMap populations.

Derti A, Cenik C, Kraft P, Roth FP.

PLoS Genet. 2010 Apr 29;6(4):e1000925. doi: 10.1371/journal.pgen.1000925.

PMID:
20442868
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Genome-wide functional analysis of human 5' untranslated region introns.

Cenik C, Derti A, Mellor JC, Berriz GF, Roth FP.

Genome Biol. 2010;11(3):R29. doi: 10.1186/gb-2010-11-3-r29. Epub 2010 Mar 11.

PMID:
20222956
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Ultraconserved elements: analyses of dosage sensitivity, motifs and boundaries.

Chiang CW, Derti A, Schwartz D, Chou MF, Hirschhorn JN, Wu CT.

Genetics. 2008 Dec;180(4):2277-93. doi: 10.1534/genetics.108.096537. Epub 2008 Oct 28.

PMID:
18957701
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Isoform discovery by targeted cloning, 'deep-well' pooling and parallel sequencing.

Salehi-Ashtiani K, Yang X, Derti A, Tian W, Hao T, Lin C, Makowski K, Shen L, Murray RR, Szeto D, Tusneem N, Smith DR, Cusick ME, Hill DE, Roth FP, Vidal M.

Nat Methods. 2008 Jul;5(7):597-600. doi: 10.1038/nmeth.1224. Epub 2008 Jun 15.

PMID:
18552854
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Mammalian ultraconserved elements are strongly depleted among segmental duplications and copy number variants.

Derti A, Roth FP, Church GM, Wu CT.

Nat Genet. 2006 Oct;38(10):1216-20. Epub 2006 Sep 24.

PMID:
16998490
[PubMed - indexed for MEDLINE]
10.

Gene expression in lung adenocarcinomas of smokers and nonsmokers.

Powell CA, Spira A, Derti A, DeLisi C, Liu G, Borczuk A, Busch S, Sahasrabudhe S, Chen Y, Sugarbaker D, Bueno R, Richards WG, Brody JS.

Am J Respir Cell Mol Biol. 2003 Aug;29(2):157-62. Epub 2003 Feb 21.

PMID:
12600827
[PubMed - indexed for MEDLINE]
11.

A computational framework for optimal masking in the synthesis of oligonucleotide microarrays.

Kasif S, Weng Z, Derti A, Beigel R, DeLisi C.

Nucleic Acids Res. 2002 Oct 15;30(20):e106.

PMID:
12384608
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genes linked by fusion events are generally of the same functional category: a systematic analysis of 30 microbial genomes.

Yanai I, Derti A, DeLisi C.

Proc Natl Acad Sci U S A. 2001 Jul 3;98(14):7940-5.

PMID:
11438739
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Computational comparison of two draft sequences of the human genome.

Aach J, Bulyk ML, Church GM, Comander J, Derti A, Shendure J.

Nature. 2001 Feb 15;409(6822):856-9.

PMID:
11237010
[PubMed - indexed for MEDLINE]
14.

ProbeDesigner: for the design of probesets for branched DNA (bDNA) signal amplification assays.

Bushnell S, Budde J, Catino T, Cole J, Derti A, Kelso R, Collins ML, Molino G, Sheridan P, Monahan J, Urdea M.

Bioinformatics. 1999 May;15(5):348-55.

PMID:
10366654
[PubMed - indexed for MEDLINE]
Free Article

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