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Results: 1 to 20 of 90

1.

The Use of Non-Variant Sites to Improve the Clinical Assessment of Whole-Genome Sequence Data.

Ferrarini A, Xumerle L, Griggio F, Garonzi M, Cantaloni C, Centomo C, Vargas SM, Descombes P, Marquis J, Collino S, Franceschi C, Garagnani P, Salisbury BA, Harvey JM, Delledonne M.

PLoS One. 2015 Jul 6;10(7):e0132180. doi: 10.1371/journal.pone.0132180. eCollection 2015.

2.

DNA methylation and gene expression profiles show novel regulatory pathways in hepatocellular carcinoma.

Udali S, Guarini P, Ruzzenente A, Ferrarini A, Guglielmi A, Lotto V, Tononi P, Pattini P, Moruzzi S, Campagnaro T, Conci S, Olivieri O, Corrocher R, Delledonne M, Choi SW, Friso S.

Clin Epigenetics. 2015 Apr 14;7(1):43. doi: 10.1186/s13148-015-0077-1. eCollection 2015.

3.

Early transcriptional changes in Beta vulgaris in response to low temperature.

Moliterni VM, Paris R, Onofri C, Orrù L, Cattivelli L, Pacifico D, Avanzato C, Ferrarini A, Delledonne M, Mandolino G.

Planta. 2015 Jul;242(1):187-201. doi: 10.1007/s00425-015-2299-z. Epub 2015 Apr 19.

PMID:
25893871
4.

The Solanum commersonii Genome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives.

Aversano R, Contaldi F, Ercolano MR, Grosso V, Iorizzo M, Tatino F, Xumerle L, Dal Molin A, Avanzato C, Ferrarini A, Delledonne M, Sanseverino W, Cigliano RA, Capella-Gutierrez S, Gabaldón T, Frusciante L, Bradeen JM, Carputo D.

Plant Cell. 2015 Apr;27(4):954-68. doi: 10.1105/tpc.114.135954. Epub 2015 Apr 14.

PMID:
25873387
5.

Symbiotic plant-fungi interactions stripped down to the root.

Venturini L, Delledonne M.

Nat Genet. 2015 Apr;47(4):309-10. doi: 10.1038/ng.3261.

PMID:
25814307
6.

Transcriptomic analysis of the late stages of grapevine (Vitis vinifera cv. Cabernet Sauvignon) berry ripening reveals significant induction of ethylene signaling and flavor pathways in the skin.

Cramer GR, Ghan R, Schlauch KA, Tillett RL, Heymann H, Ferrarini A, Delledonne M, Zenoni S, Fasoli M, Pezzotti M.

BMC Plant Biol. 2014 Dec 19;14:370. doi: 10.1186/s12870-014-0370-8.

7.

RNA-Seq profile of flavescence dorée phytoplasma in grapevine.

Abbà S, Galetto L, Carle P, Carrère S, Delledonne M, Foissac X, Palmano S, Veratti F, Marzachì C.

BMC Genomics. 2014 Dec 11;15:1088. doi: 10.1186/1471-2164-15-1088.

8.

Transcriptional Reprogramming of the Mycoparasitic Fungus Ampelomyces quisqualis During the Powdery Mildew Host-Induced Germination.

Siozios S, Tosi L, Ferrarini A, Ferrari A, Tononi P, Bellin D, Maurhofer M, Gessler C, Delledonne M, Pertot I.

Phytopathology. 2015 Feb;105(2):199-209. doi: 10.1094/PHYTO-01-14-0013-R.

PMID:
25185010
9.

Functional genomic analysis of constitutive and inducible defense responses to Fusarium verticillioides infection in maize genotypes with contrasting ear rot resistance.

Lanubile A, Ferrarini A, Maschietto V, Delledonne M, Marocco A, Bellin D.

BMC Genomics. 2014 Aug 25;15:710. doi: 10.1186/1471-2164-15-710.

10.

Metabolite and transcript profiling of berry skin during fruit development elucidates differential regulation between Cabernet Sauvignon and Shiraz cultivars at branching points in the polyphenol pathway.

Degu A, Hochberg U, Sikron N, Venturini L, Buson G, Ghan R, Plaschkes I, Batushansky A, Chalifa-Caspi V, Mattivi F, Delledonne M, Pezzotti M, Rachmilevitch S, Cramer GR, Fait A.

BMC Plant Biol. 2014 Jul 26;14:188. doi: 10.1186/s12870-014-0188-4.

11.

Curtobacterium sp. Genome Sequencing Underlines Plant Growth Promotion-Related Traits.

Bulgari D, Minio A, Casati P, Quaglino F, Delledonne M, Bianco PA.

Genome Announc. 2014 Jul 17;2(4). pii: e00592-14. doi: 10.1128/genomeA.00592-14.

12.

Detection and function of nitric oxide during the hypersensitive response in Arabidopsis thaliana: where there's a will there's a way.

Chen J, Vandelle E, Bellin D, Delledonne M.

Nitric Oxide. 2014 Dec 1;43:81-8. doi: 10.1016/j.niox.2014.06.008. Epub 2014 Jul 4.

PMID:
24998201
13.

The three genetics (nuclear DNA, mitochondrial DNA, and gut microbiome) of longevity in humans considered as metaorganisms.

Garagnani P, Pirazzini C, Giuliani C, Candela M, Brigidi P, Sevini F, Luiselli D, Bacalini MG, Salvioli S, Capri M, Monti D, Mari D, Collino S, Delledonne M, Descombes P, Franceschi C.

Biomed Res Int. 2014;2014:560340. doi: 10.1155/2014/560340. Epub 2014 Apr 24. Review.

14.

Decreased Nucleotide and Expression Diversity and Modified Coexpression Patterns Characterize Domestication in the Common Bean.

Bellucci E, Bitocchi E, Ferrarini A, Benazzo A, Biagetti E, Klie S, Minio A, Rau D, Rodriguez M, Panziera A, Venturini L, Attene G, Albertini E, Jackson SA, Nanni L, Fernie AR, Nikoloski Z, Bertorelle G, Delledonne M, Papa R.

Plant Cell. 2014 May 21;26(5):1901-1912. [Epub ahead of print]

15.

De novo genome assembly of the soil-borne fungus and tomato pathogen Pyrenochaeta lycopersici.

Aragona M, Minio A, Ferrarini A, Valente MT, Bagnaresi P, Orrù L, Tononi P, Zamperin G, Infantino A, Valè G, Cattivelli L, Delledonne M.

BMC Genomics. 2014 Apr 27;15:313. doi: 10.1186/1471-2164-15-313.

16.

Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variations.

Ercolano MR, Sacco A, Ferriello F, D'Alessandro R, Tononi P, Traini A, Barone A, Zago E, Chiusano ML, Buson G, Delledonne M, Frusciante L.

BMC Genomics. 2014 Feb 18;15:138. doi: 10.1186/1471-2164-15-138.

17.

The sulfated laminarin triggers a stress transcriptome before priming the SA- and ROS-dependent defenses during grapevine's induced resistance against Plasmopara viticola.

Gauthier A, Trouvelot S, Kelloniemi J, Frettinger P, Wendehenne D, Daire X, Joubert JM, Ferrarini A, Delledonne M, Flors V, Poinssot B.

PLoS One. 2014 Feb 6;9(2):e88145. doi: 10.1371/journal.pone.0088145. eCollection 2014.

18.

The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome.

Da Silva C, Zamperin G, Ferrarini A, Minio A, Dal Molin A, Venturini L, Buson G, Tononi P, Avanzato C, Zago E, Boido E, Dellacassa E, Gaggero C, Pezzotti M, Carrau F, Delledonne M.

Plant Cell. 2013 Dec;25(12):4777-88. doi: 10.1105/tpc.113.118810. Epub 2013 Dec 6.

19.

S-nitrosylation of ascorbate peroxidase is part of programmed cell death signaling in tobacco Bright Yellow-2 cells.

de Pinto MC, Locato V, Sgobba A, Romero-Puertas Mdel C, Gadaleta C, Delledonne M, De Gara L.

Plant Physiol. 2013 Dec;163(4):1766-75. doi: 10.1104/pp.113.222703. Epub 2013 Oct 24.

20.

Slug/β-catenin-dependent proinflammatory phenotype in hypoxic breast cancer stem cells.

Storci G, Bertoni S, De Carolis S, Papi A, Nati M, Ceccarelli C, Pirazzini C, Garagnani P, Ferrarini A, Buson G, Delledonne M, Fiorentino M, Capizzi E, Gruppioni E, Taffurelli M, Santini D, Franceschi C, Bandini G, Bonifazi F, Bonafé M.

Am J Pathol. 2013 Nov;183(5):1688-97. doi: 10.1016/j.ajpath.2013.07.020. Epub 2013 Sep 12.

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