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Results: 1 to 20 of 191

1.

Diagnostic value of preoperative CT scan to stratify colon cancer for neoadjuvant therapy.

Wiegering A, Kunz M, Hussein M, Klein I, Wiegering V, Uthe FW, Dietz UA, Jurowich C, Bley T, Dandekar T, Germer CT, Ritter C.

Int J Colorectal Dis. 2015 May 22. [Epub ahead of print]

PMID:
25997602
2.

Host-adapted metabolism and its regulation in bacterial pathogens.

Dandekar T, Eisenreich W.

Front Cell Infect Microbiol. 2015 Mar 27;5:28. doi: 10.3389/fcimb.2015.00028. eCollection 2015. No abstract available.

3.

Salmonella-how a metabolic generalist adopts an intracellular lifestyle during infection.

Dandekar T, Fieselmann A, Fischer E, Popp J, Hensel M, Noster J.

Front Cell Infect Microbiol. 2015 Jan 29;4:191. doi: 10.3389/fcimb.2014.00191. eCollection 2014.

4.

Modelling antibiotic and cytotoxic isoquinoline effects in Staphylococcus aureus, Staphylococcus epidermidis and mammalian cells.

Cecil A, Ohlsen K, Menzel T, François P, Schrenzel J, Fischer A, Dörries K, Selle M, Lalk M, Hantzschmann J, Dittrich M, Liang C, Bernhardt J, Ölschläger TA, Bringmann G, Bruhn H, Unger M, Ponte-Sucre A, Lehmann L, Dandekar T.

Int J Med Microbiol. 2015 Jan;305(1):96-109. doi: 10.1016/j.ijmm.2014.11.006. Epub 2014 Nov 27.

PMID:
25500547
5.

Bioinformatics of cardiovascular miRNA biology.

Kunz M, Xiao K, Liang C, Viereck J, Pachel C, Frantz S, Thum T, Dandekar T.

J Mol Cell Cardiol. 2014 Dec 5. pii: S0022-2828(14)00387-3. doi: 10.1016/j.yjmcc.2014.11.027. [Epub ahead of print] Review.

PMID:
25486579
6.

Antigen profiling analysis of vaccinia virus injected canine tumors: oncolytic virus efficiency predicted by boolean models.

Cecil A, Gentschev I, Adelfinger M, Nolte I, Dandekar T, Szalay AA.

Bioengineered. 2014 Sep-Oct;5(5):319-25. doi: 10.4161/bioe.32227.

PMID:
25482233
7.

Lipid-Pro: a computational lipid identification solution for untargeted lipidomics on data-independent acquisition tandem mass spectrometry platforms.

Ahmed Z, Mayr M, Zeeshan S, Dandekar T, Mueller MJ, Fekete A.

Bioinformatics. 2015 Apr 1;31(7):1150-3. doi: 10.1093/bioinformatics/btu796. Epub 2014 Nov 29.

PMID:
25433698
8.

Stem-cell-triggered immunity safeguards cytokinin enriched plant shoot apexes from pathogen infection.

Naseem M, Srivastava M, Dandekar T.

Front Plant Sci. 2014 Oct 30;5:588. doi: 10.3389/fpls.2014.00588. eCollection 2014.

9.

Developing sustainable software solutions for bioinformatics by the " Butterfly" paradigm.

Ahmed Z, Zeeshan S, Dandekar T.

Version 2. F1000Res. 2014 Mar 13 [revised 2014 Aug 1];3:71. doi: 10.12688/f1000research.3681.2. eCollection 2014.

10.

'Isotopo' a database application for facile analysis and management of mass isotopomer data.

Ahmed Z, Zeeshan S, Huber C, Hensel M, Schomburg D, Münch R, Eylert E, Eisenreich W, Dandekar T.

Database (Oxford). 2014 Sep 9;2014. pii: bau077. doi: 10.1093/database/bau077. Print 2014.

11.

Inhibition of the SR protein-phosphorylating CLK kinases of Plasmodium falciparum impairs blood stage replication and malaria transmission.

Kern S, Agarwal S, Huber K, Gehring AP, Strödke B, Wirth CC, Brügl T, Abodo LO, Dandekar T, Doerig C, Fischer R, Tobin AB, Alam MM, Bracher F, Pradel G.

PLoS One. 2014 Sep 4;9(9):e105732. doi: 10.1371/journal.pone.0105732. eCollection 2014.

12.

Complete genome sequence of the gram-negative probiotic Escherichia coli strain Nissle 1917.

Reister M, Hoffmeier K, Krezdorn N, Rotter B, Liang C, Rund S, Dandekar T, Sonnenborn U, Oelschlaeger TA.

J Biotechnol. 2014 Oct 10;187:106-7. doi: 10.1016/j.jbiotec.2014.07.442. Epub 2014 Aug 2.

PMID:
25093936
13.

Evaluation and prediction of the HIV-1 central polypurine tract influence on foamy viral vectors to transduce dividing and growth-arrested cells.

Shityakov S, Förster C, Rethwilm A, Dandekar T.

ScientificWorldJournal. 2014;2014:487969. doi: 10.1155/2014/487969. Epub 2014 Jun 9.

14.

A comparative analysis of the bistability switch for platelet aggregation by logic ODE based dynamical modeling.

Mischnik M, Gambaryan S, Subramanian H, Geiger J, Schütz C, Timmer J, Dandekar T.

Mol Biosyst. 2014 Aug;10(8):2082-9. doi: 10.1039/c4mb00170b.

PMID:
24852796
15.

Functional module search in protein networks based on semantic similarity improves the analysis of proteomics data.

Boyanova D, Nilla S, Klau GW, Dandekar T, Müller T, Dittrich M.

Mol Cell Proteomics. 2014 Jul;13(7):1877-89. doi: 10.1074/mcp.M113.032839. Epub 2014 May 7.

PMID:
24807868
16.

Cytokinins for immunity beyond growth, galls and green islands.

Naseem M, Wölfling M, Dandekar T.

Trends Plant Sci. 2014 Aug;19(8):481-4. doi: 10.1016/j.tplants.2014.04.001. Epub 2014 May 1. Review.

PMID:
24794463
17.

Perforin-like protein PPLP2 permeabilizes the red blood cell membrane during egress of Plasmodium falciparum gametocytes.

Wirth CC, Glushakova S, Scheuermayer M, Repnik U, Garg S, Schaack D, Kachman MM, Weißbach T, Zimmerberg J, Dandekar T, Griffiths G, Chitnis CE, Singh S, Fischer R, Pradel G.

Cell Microbiol. 2014 May;16(5):709-33. doi: 10.1111/cmi.12288. Epub 2014 Apr 4.

18.

Probing the unknowns in cytokinin-mediated immune defense in Arabidopsis with systems biology approaches.

Naseem M, Kunz M, Dandekar T.

Bioinform Biol Insights. 2014 Feb 13;8:35-44. doi: 10.4137/BBI.S13462.. eCollection 2014.

19.

Quantitative single-molecule localization microscopy combined with rule-based modeling reveals ligand-induced TNF-R1 reorganization toward higher-order oligomers.

Fricke F, Malkusch S, Wangorsch G, Greiner JF, Kaltschmidt B, Kaltschmidt C, Widera D, Dandekar T, Heilemann M.

Histochem Cell Biol. 2014 Jul;142(1):91-101. doi: 10.1007/s00418-014-1195-0. Epub 2014 Feb 12.

PMID:
24519400
20.

The impact of cytokinin on jasmonate-salicylate antagonism in Arabidopsis immunity against infection with Pst DC3000.

Naseem M, Kaltdorf M, Hussain A, Dandekar T.

Plant Signal Behav. 2013 Oct;8(10):doi: 10.4161/psb.26791.

PMID:
24494231
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