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Items: 1 to 20 of 45

1.

Distribution of the DNA transposon family, Pokey in the Daphnia pulex species complex.

Eagle SH, Crease TJ.

Mob DNA. 2016 Jun 17;7:11. doi: 10.1186/s13100-016-0067-7. eCollection 2016.

2.

Divergence thresholds and divergent biodiversity estimates: can metabarcoding reliably describe zooplankton communities?

Brown EA, Chain FJ, Crease TJ, MacIsaac HJ, Cristescu ME.

Ecol Evol. 2015 Jun;5(11):2234-51. doi: 10.1002/ece3.1485. Epub 2015 May 13.

3.

Copy number of the transposon, Pokey, in rDNA is positively correlated with rDNA copy number in Daphnia obtuse [corrected].

LeRiche K, Eagle SH, Crease TJ.

PLoS One. 2014 Dec 9;9(12):e114773. doi: 10.1371/journal.pone.0114773. eCollection 2014. Erratum in: PLoS One. 2015;10(2):e0117640.

4.

Gene expression variation in duplicate lactate dehydrogenase genes: do ecological species show distinct responses?

Cristescu ME, Demiri B, Altshuler I, Crease TJ.

PLoS One. 2014 Jul 31;9(7):e103964. doi: 10.1371/journal.pone.0103964. eCollection 2014.

5.

Impact of ploidy level on the distribution of Pokey element insertions in the Daphnia pulex complex.

Vergilino R, Eagle SH, Crease TJ, Dufresne F.

Mob DNA. 2014 Jan 2;5(1):1. doi: 10.1186/1759-8753-5-1.

6.

In and out of the rRNA genes: characterization of Pokey elements in the sequenced Daphnia genome.

Elliott TA, Stage DE, Crease TJ, Eickbush TH.

Mob DNA. 2013 Sep 23;4(1):20. doi: 10.1186/1759-8753-4-20.

7.

Evolution of a transposon in Daphnia hybrid genomes.

Vergilino R, Elliott TA, Desjardins-Proulx P, Crease TJ, Dufresne F.

Mob DNA. 2013 Feb 6;4(1):7. doi: 10.1186/1759-8753-4-7.

8.

Transcontinental phylogeography of the Daphnia pulex species complex.

Crease TJ, Omilian AR, Costanzo KS, Taylor DJ.

PLoS One. 2012;7(10):e46620. doi: 10.1371/journal.pone.0046620. Epub 2012 Oct 3.

9.

Copy number variation of ribosomal DNA and Pokey transposons in natural populations of Daphnia.

Eagle SH, Crease TJ.

Mob DNA. 2012 Mar 5;3(1):4. doi: 10.1186/1759-8753-3-4.

10.

Speciation with gene flow and the genetics of habitat transitions.

Cristescu ME, Constantin A, Bock DG, Cáceres CE, Crease TJ.

Mol Ecol. 2012 Mar;21(6):1411-22. doi: 10.1111/j.1365-294X.2011.05465.x. Epub 2012 Jan 23.

PMID:
22269101
11.

Evolutionary factors affecting Lactate dehydrogenase A and B variation in the Daphnia pulex species complex.

Crease TJ, Floyd R, Cristescu ME, Innes D.

BMC Evol Biol. 2011 Jul 18;11:212. doi: 10.1186/1471-2148-11-212.

12.

The ecoresponsive genome of Daphnia pulex.

Colbourne JK, Pfrender ME, Gilbert D, Thomas WK, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK, Bauer DJ, Cáceres CE, Carmel L, Casola C, Choi JH, Detter JC, Dong Q, Dusheyko S, Eads BD, Fröhlich T, Geiler-Samerotte KA, Gerlach D, Hatcher P, Jogdeo S, Krijgsveld J, Kriventseva EV, Kültz D, Laforsch C, Lindquist E, Lopez J, Manak JR, Muller J, Pangilinan J, Patwardhan RP, Pitluck S, Pritham EJ, Rechtsteiner A, Rho M, Rogozin IB, Sakarya O, Salamov A, Schaack S, Shapiro H, Shiga Y, Skalitzky C, Smith Z, Souvorov A, Sung W, Tang Z, Tsuchiya D, Tu H, Vos H, Wang M, Wolf YI, Yamagata H, Yamada T, Ye Y, Shaw JR, Andrews J, Crease TJ, Tang H, Lucas SM, Robertson HM, Bork P, Koonin EV, Zdobnov EM, Grigoriev IV, Lynch M, Boore JL.

Science. 2011 Feb 4;331(6017):555-61. doi: 10.1126/science.1197761.

13.

Evolution of the nuclear ribosomal DNA intergenic spacer in four species of the Daphnia pulex complex.

Ambrose CD, Crease TJ.

BMC Genet. 2011 Jan 24;12:13. doi: 10.1186/1471-2156-12-13.

14.

Evolution of repeated sequences in the ribosomal DNA intergenic spacer of 32 arthropod species.

Ambrose CD, Crease TJ.

J Mol Evol. 2010 Mar;70(3):247-59. doi: 10.1007/s00239-010-9324-4. Epub 2010 Feb 27.

PMID:
20191268
15.

Length variation in 18S rRNA expansion segment 43/e4 of Daphnia obtusa: ancient or recurring polymorphism?

McTaggart SJ, Crease TJ.

J Mol Evol. 2009 Aug;69(2):142-9. doi: 10.1007/s00239-009-9257-y. Epub 2009 Jul 7.

PMID:
19582497
16.

Development of primers for the mitochondrial cytochrome c oxidase I gene in digenetic trematodes (Platyhelminthes) illustrates the challenge of barcoding parasitic helminths.

Moszczynska A, Locke SA, McLaughlin JD, Marcogliese DJ, Crease TJ.

Mol Ecol Resour. 2009 May;9 Suppl s1:75-82. doi: 10.1111/j.1755-0998.2009.02634.x.

PMID:
21564967
17.

The effect of transposon Pokey insertions on sequence variation in the 28S rRNA gene of Daphnia pulex.

Glass SK, Moszczynska A, Crease TJ.

Genome. 2008 Dec;51(12):988-1000. doi: 10.1139/G08-092.

PMID:
19088812
18.

D- and L-lactate dehydrogenases during invertebrate evolution.

Cristescu ME, Innes DJ, Stillman JH, Crease TJ.

BMC Evol Biol. 2008 Oct 1;8:268. doi: 10.1186/1471-2148-8-268.

19.

The association between breeding system and transposable element dynamics in Daphnia pulex.

Valizadeh P, Crease TJ.

J Mol Evol. 2008 Jun;66(6):643-54. doi: 10.1007/s00239-008-9118-0. Epub 2008 May 20.

PMID:
18491025
20.

Rates of recombination in the ribosomal DNA of apomictically propagated Daphnia obtusa lines.

McTaggart SJ, Dudycha JL, Omilian A, Crease TJ.

Genetics. 2007 Jan;175(1):311-20. Epub 2006 Nov 16.

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