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Results: 1 to 20 of 48

1.

Regime shifts in Balinese subaks.

Lansing JS, Cheong SA, Chew LY, Cox MP, Ho MH, Arthawiguna WA.

Curr Anthropol. 2014 Apr;55(2):232-9. No abstract available.

PMID:
24991686
[PubMed - indexed for MEDLINE]
2.

SMARTPOP: inferring the impact of social dynamics on genetic diversity through high speed simulations.

Guillot EG, Cox MP.

BMC Bioinformatics. 2014 Jun 9;15:175. doi: 10.1186/1471-2105-15-175.

PMID:
24913447
[PubMed - in process]
Free PMC Article
3.

An interspecific fungal hybrid reveals cross-kingdom rules for allopolyploid gene expression patterns.

Cox MP, Dong T, Shen G, Dalvi Y, Scott DB, Ganley AR.

PLoS Genet. 2014 Mar 6;10(3):e1004180. doi: 10.1371/journal.pgen.1004180. eCollection 2014 Mar.

PMID:
24603805
[PubMed - in process]
Free PMC Article
4.

Semi-automatic selection of summary statistics for ABC model choice.

Prangle D, Fearnhead P, Cox MP, Biggs PJ, French NP.

Stat Appl Genet Mol Biol. 2014 Feb;13(1):67-82. doi: 10.1515/sagmb-2013-0012.

PMID:
24323893
[PubMed - in process]
5.

Climate change influenced female population sizes through time across the Indonesian archipelago.

Guillot EG, Tumonggor MK, Lansing JS, Sudoyo H, Cox MP.

Hum Biol. 2013 Feb-Jun;85(1-3):135-52.

PMID:
24297223
[PubMed - in process]
6.

Inexpensive photonic crystal spectrometer for colorimetric sensing applications.

Bryan KM, Jia Z, Pervez NK, Cox MP, Gazes MJ, Kymissis I.

Opt Express. 2013 Feb 25;21(4):4411-23. doi: 10.1364/OE.21.004411.

PMID:
23481975
[PubMed - indexed for MEDLINE]
7.

Fragmentation of an aflatoxin-like gene cluster in a forest pathogen.

Bradshaw RE, Slot JC, Moore GG, Chettri P, de Wit PJ, Ehrlich KC, Ganley AR, Olson MA, Rokas A, Carbone I, Cox MP.

New Phytol. 2013 Apr;198(2):525-35. doi: 10.1111/nph.12161. Epub 2013 Mar 1.

PMID:
23448391
[PubMed - indexed for MEDLINE]
8.

Reconstructing past changes in locus-specific recombination rates.

Cox MP, Holland BR, Wilkins MC, Schmid J.

BMC Genet. 2013 Feb 25;14:11. doi: 10.1186/1471-2156-14-11.

PMID:
23442125
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

The Indonesian archipelago: an ancient genetic highway linking Asia and the Pacific.

Tumonggor MK, Karafet TM, Hallmark B, Lansing JS, Sudoyo H, Hammer MF, Cox MP.

J Hum Genet. 2013 Mar;58(3):165-73. doi: 10.1038/jhg.2012.154. Epub 2013 Jan 24.

PMID:
23344321
[PubMed - indexed for MEDLINE]
10.

The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry.

de Wit PJ, van der Burgt A, Ökmen B, Stergiopoulos I, Abd-Elsalam KA, Aerts AL, Bahkali AH, Beenen HG, Chettri P, Cox MP, Datema E, de Vries RP, Dhillon B, Ganley AR, Griffiths SA, Guo Y, Hamelin RC, Henrissat B, Kabir MS, Jashni MK, Kema G, Klaubauf S, Lapidus A, Levasseur A, Lindquist E, Mehrabi R, Ohm RA, Owen TJ, Salamov A, Schwelm A, Schijlen E, Sun H, van den Burg HA, van Ham RC, Zhang S, Goodwin SB, Grigoriev IV, Collemare J, Bradshaw RE.

PLoS Genet. 2012;8(11):e1003088. doi: 10.1371/journal.pgen.1003088. Epub 2012 Nov 29.

PMID:
23209441
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Dothistromin genes at multiple separate loci are regulated by AflR.

Chettri P, Ehrlich KC, Cary JW, Collemare J, Cox MP, Griffiths SA, Olson MA, de Wit PJ, Bradshaw RE.

Fungal Genet Biol. 2013 Feb;51:12-20. doi: 10.1016/j.fgb.2012.11.006. Epub 2012 Dec 1.

PMID:
23207690
[PubMed - indexed for MEDLINE]
12.

The guanine nucleotide exchange factor RIC8 regulates conidial germination through Gα proteins in Neurospora crassa.

Eaton CJ, Cabrera IE, Servin JA, Wright SJ, Cox MP, Borkovich KA.

PLoS One. 2012;7(10):e48026. doi: 10.1371/journal.pone.0048026. Epub 2012 Oct 31.

PMID:
23118921
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

A small cohort of Island Southeast Asian women founded Madagascar.

Cox MP, Nelson MG, Tumonggor MK, Ricaut FX, Sudoyo H.

Proc Biol Sci. 2012 Jul 22;279(1739):2761-8. doi: 10.1098/rspb.2012.0012. Epub 2012 Mar 21.

PMID:
22438500
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genetic continuity across a deeply divergent linguistic contact zone in North Maluku, Indonesia.

Wilder JA, Cox MP, Paquette AM, Alford R, Satyagraha AW, Harahap A, Sudoyo H.

BMC Genet. 2011 Nov 18;12:100. doi: 10.1186/1471-2156-12-100.

PMID:
22098696
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Population growth of Mexican free-tailed bats (Tadarida brasiliensis mexicana) predates human agricultural activity.

Russell AL, Cox MP, Brown VA, McCracken GF.

BMC Evol Biol. 2011 Apr 1;11:88. doi: 10.1186/1471-2148-11-88.

PMID:
21457563
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

What triggers grass endophytes to switch from mutualism to pathogenism?

Eaton CJ, Cox MP, Scott B.

Plant Sci. 2011 Feb;180(2):190-5. doi: 10.1016/j.plantsci.2010.10.002. Epub 2010 Oct 16. Review.

PMID:
21421360
[PubMed - indexed for MEDLINE]
17.

Exploring molecular signaling in plant-fungal symbioses using high throughput RNA sequencing.

Cox MP, Eaton CJ, Scott DB.

Plant Signal Behav. 2010 Nov;5(11):1353-8. Epub 2010 Nov 1. Review.

PMID:
21045557
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data.

Cox MP, Peterson DA, Biggs PJ.

BMC Bioinformatics. 2010 Sep 27;11:485. doi: 10.1186/1471-2105-11-485.

PMID:
20875133
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The ratio of human X chromosome to autosome diversity is positively correlated with genetic distance from genes.

Hammer MF, Woerner AE, Mendez FL, Watkins JC, Cox MP, Wall JD.

Nat Genet. 2010 Oct;42(10):830-1. doi: 10.1038/ng.651. Epub 2010 Aug 29.

PMID:
20802480
[PubMed - indexed for MEDLINE]
20.

A question of scale: Human migrations writ large and small.

Cox MP, Hammer MF.

BMC Biol. 2010 Jul 21;8:98. doi: 10.1186/1741-7007-8-98.

PMID:
20659353
[PubMed - indexed for MEDLINE]
Free PMC Article

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