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Items: 13

1.

Evidence for a dual role of actin in regulating chromosome organization and dynamics in yeast.

Spichal M, Brion A, Herbert S, Cournac A, Marbouty M, Zimmer C, Koszul R, Fabre E.

J Cell Sci. 2016 Feb 15;129(4):681-92. doi: 10.1242/jcs.175745. Epub 2016 Jan 13.

PMID:
26763908
2.

The 3D folding of metazoan genomes correlates with the association of similar repetitive elements.

Cournac A, Koszul R, Mozziconacci J.

Nucleic Acids Res. 2016 Jan 8;44(1):245-55. doi: 10.1093/nar/gkv1292. Epub 2015 Nov 24.

3.

Generation and Analysis of Chromosomal Contact Maps of Yeast Species.

Cournac A, Marbouty M, Mozziconacci J, Koszul R.

Methods Mol Biol. 2016;1361:227-45. doi: 10.1007/978-1-4939-3079-1_13.

PMID:
26483025
4.

Spatial reorganization of telomeres in long-lived quiescent cells.

Guidi M, Ruault M, Marbouty M, Loïodice I, Cournac A, Billaudeau C, Hocher A, Mozziconacci J, Koszul R, Taddei A.

Genome Biol. 2015 Sep 23;16:206. doi: 10.1186/s13059-015-0766-2.

5.

Genome-wide replication landscape of Candida glabrata.

Descorps-Declère S, Saguez C, Cournac A, Marbouty M, Rolland T, Ma L, Bouchier C, Moszer I, Dujon B, Koszul R, Richard GF.

BMC Biol. 2015 Sep 2;13:69. doi: 10.1186/s12915-015-0177-6.

6.

Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging.

Marbouty M, Le Gall A, Cattoni DI, Cournac A, Koh A, Fiche JB, Mozziconacci J, Murray H, Koszul R, Nollmann M.

Mol Cell. 2015 Aug 20;59(4):588-602. doi: 10.1016/j.molcel.2015.07.020.

PMID:
26295962
7.

High-quality genome (re)assembly using chromosomal contact data.

Marie-Nelly H, Marbouty M, Cournac A, Flot JF, Liti G, Parodi DP, Syan S, Guillén N, Margeot A, Zimmer C, Koszul R.

Nat Commun. 2014 Dec 17;5:5695. doi: 10.1038/ncomms6695.

8.

Metagenomic chromosome conformation capture (meta3C) unveils the diversity of chromosome organization in microorganisms.

Marbouty M, Cournac A, Flot JF, Marie-Nelly H, Mozziconacci J, Koszul R.

Elife. 2014 Dec 17;3:e03318. doi: 10.7554/eLife.03318.

9.

3D genome reconstruction from chromosomal contacts.

Lesne A, Riposo J, Roger P, Cournac A, Mozziconacci J.

Nat Methods. 2014 Nov;11(11):1141-3. doi: 10.1038/nmeth.3104. Epub 2014 Sep 21.

PMID:
25240436
10.

Filling annotation gaps in yeast genomes using genome-wide contact maps.

Marie-Nelly H, Marbouty M, Cournac A, Liti G, Fischer G, Zimmer C, Koszul R.

Bioinformatics. 2014 Aug 1;30(15):2105-13. doi: 10.1093/bioinformatics/btu162. Epub 2014 Apr 7.

11.

DNA looping in prokaryotes: experimental and theoretical approaches.

Cournac A, Plumbridge J.

J Bacteriol. 2013 Mar;195(6):1109-19. doi: 10.1128/JB.02038-12. Epub 2013 Jan 4. Review.

12.

Normalization of a chromosomal contact map.

Cournac A, Marie-Nelly H, Marbouty M, Koszul R, Mozziconacci J.

BMC Genomics. 2012 Aug 30;13:436. doi: 10.1186/1471-2164-13-436.

13.

Simple molecular networks that respond optimally to time-periodic stimulation.

Cournac A, Sepulchre JA.

BMC Syst Biol. 2009 Mar 3;3:29. doi: 10.1186/1752-0509-3-29.

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