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Results: 1 to 20 of 63

1.

USP8 regulates mitophagy by removing K6-linked ubiquitin conjugates from parkin.

Durcan TM, Tang MY, Pérusse JR, Dashti EA, Aguileta MA, McLelland GL, Gros P, Shaler TA, Faubert D, Coulombe B, Fon EA.

EMBO J. 2014 Sep 12. pii: e201489729. [Epub ahead of print]

PMID:
25216678
[PubMed - as supplied by publisher]
Free Article
2.

Increased Subcutaneous Adipose Tissue Expression of Genes Involved in Glycerolipid-Fatty Acid Cycling in Obese Insulin-Resistant Versus -Sensitive Individuals.

Gauthier MS, Pérusse JR, Lavoie ME, Sladek R, Madiraju SR, Ruderman NB, Coulombe B, Prentki M, Rabasa-Lhoret R.

J Clin Endocrinol Metab. 2014 Sep 11:jc20141662. [Epub ahead of print]

PMID:
25210878
[PubMed - as supplied by publisher]
3.

Methylation of the DNA/RNA-binding protein Kin17 by METTL22 affects its association with chromatin.

Cloutier P, Lavallée-Adam M, Faubert D, Blanchette M, Coulombe B.

J Proteomics. 2014 Apr 4;100:115-24. doi: 10.1016/j.jprot.2013.10.008. Epub 2013 Oct 16.

PMID:
24140279
[PubMed - in process]
4.

The CRAPome: a contaminant repository for affinity purification-mass spectrometry data.

Mellacheruvu D, Wright Z, Couzens AL, Lambert JP, St-Denis NA, Li T, Miteva YV, Hauri S, Sardiu ME, Low TY, Halim VA, Bagshaw RD, Hubner NC, Al-Hakim A, Bouchard A, Faubert D, Fermin D, Dunham WH, Goudreault M, Lin ZY, Badillo BG, Pawson T, Durocher D, Coulombe B, Aebersold R, Superti-Furga G, Colinge J, Heck AJ, Choi H, Gstaiger M, Mohammed S, Cristea IM, Bennett KL, Washburn MP, Raught B, Ewing RM, Gingras AC, Nesvizhskii AI.

Nat Methods. 2013 Aug;10(8):730-6. doi: 10.1038/nmeth.2557. Epub 2013 Jul 7.

PMID:
23921808
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Nuclear import of RNA polymerase II is coupled with nucleocytoplasmic shuttling of the RNA polymerase II-associated protein 2.

Forget D, Lacombe AA, Cloutier P, Lavallée-Adam M, Blanchette M, Coulombe B.

Nucleic Acids Res. 2013 Aug;41(14):6881-91. doi: 10.1093/nar/gkt455. Epub 2013 May 30.

PMID:
23723243
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Regulation of molecular chaperones through post-translational modifications: decrypting the chaperone code.

Cloutier P, Coulombe B.

Biochim Biophys Acta. 2013 May;1829(5):443-54. doi: 10.1016/j.bbagrm.2013.02.010. Epub 2013 Feb 28. Review.

PMID:
23459247
[PubMed - indexed for MEDLINE]
Free Article
7.

A newly uncovered group of distantly related lysine methyltransferases preferentially interact with molecular chaperones to regulate their activity.

Cloutier P, Lavallée-Adam M, Faubert D, Blanchette M, Coulombe B.

PLoS Genet. 2013;9(1):e1003210. doi: 10.1371/journal.pgen.1003210. Epub 2013 Jan 17.

PMID:
23349634
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Rapid development of sensitive, high-throughput, quantitative and highly selective mass spectrometric targeted immunoassays for clinically important proteins in human plasma and serum.

Krastins B, Prakash A, Sarracino DA, Nedelkov D, Niederkofler EE, Kiernan UA, Nelson R, Vogelsang MS, Vadali G, Garces A, Sutton JN, Peterman S, Byram G, Darbouret B, Pérusse JR, Seidah NG, Coulombe B, Gobom J, Portelius E, Pannee J, Blennow K, Kulasingam V, Couchman L, Moniz C, Lopez MF.

Clin Biochem. 2013 Apr;46(6):399-410. doi: 10.1016/j.clinbiochem.2012.12.019. Epub 2013 Jan 8.

PMID:
23313081
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Discovery of cell compartment specific protein-protein interactions using affinity purification combined with tandem mass spectrometry.

Lavallée-Adam M, Rousseau J, Domecq C, Bouchard A, Forget D, Faubert D, Blanchette M, Coulombe B.

J Proteome Res. 2013 Jan 4;12(1):272-81. doi: 10.1021/pr300778b. Epub 2012 Dec 4.

PMID:
23157168
[PubMed - indexed for MEDLINE]
10.

Molecular dynamics and mutational analysis of the catalytic and translocation cycle of RNA polymerase.

Kireeva ML, Opron K, Seibold SA, Domecq C, Cukier RI, Coulombe B, Kashlev M, Burton ZF.

BMC Biophys. 2012 Jun 7;5:11. doi: 10.1186/2046-1682-5-11.

PMID:
22676913
[PubMed]
Free PMC Article
11.

Interaction of RNA polymerase II fork loop 2 with downstream non-template DNA regulates transcription elongation.

Kireeva ML, Domecq C, Coulombe B, Burton ZF, Kashlev M.

J Biol Chem. 2011 Sep 2;286(35):30898-910. doi: 10.1074/jbc.M111.260844. Epub 2011 Jul 5.

PMID:
21730074
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The RPB2 flap loop of human RNA polymerase II is dispensable for transcription initiation and elongation.

Palangat M, Grass JA, Langelier MF, Coulombe B, Landick R.

Mol Cell Biol. 2011 Aug;31(16):3312-25. doi: 10.1128/MCB.05318-11. Epub 2011 Jun 13.

PMID:
21670157
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Transcription factor IIS cooperates with the E3 ligase UBR5 to ubiquitinate the CDK9 subunit of the positive transcription elongation factor B.

Cojocaru M, Bouchard A, Cloutier P, Cooper JJ, Varzavand K, Price DH, Coulombe B.

J Biol Chem. 2011 Feb 18;286(7):5012-22. doi: 10.1074/jbc.M110.176628. Epub 2010 Dec 2.

PMID:
21127351
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Modeling contaminants in AP-MS/MS experiments.

Lavallée-Adam M, Cloutier P, Coulombe B, Blanchette M.

J Proteome Res. 2011 Feb 4;10(2):886-95. doi: 10.1021/pr100795z. Epub 2010 Dec 31.

PMID:
21117706
[PubMed - indexed for MEDLINE]
15.

Mapping the disease protein interactome: toward a molecular medicine GPS to accelerate drug and biomarker discovery.

Coulombe B.

J Proteome Res. 2011 Jan 7;10(1):120-5. doi: 10.1021/pr100609a. Epub 2010 Nov 15.

PMID:
20939596
[PubMed - indexed for MEDLINE]
16.

The protein interaction network of the human transcription machinery reveals a role for the conserved GTPase RPAP4/GPN1 and microtubule assembly in nuclear import and biogenesis of RNA polymerase II.

Forget D, Lacombe AA, Cloutier P, Al-Khoury R, Bouchard A, Lavallée-Adam M, Faubert D, Jeronimo C, Blanchette M, Coulombe B.

Mol Cell Proteomics. 2010 Dec;9(12):2827-39. doi: 10.1074/mcp.M110.003616. Epub 2010 Sep 20.

PMID:
20855544
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Conformational coupling, bridge helix dynamics and active site dehydration in catalysis by RNA polymerase.

Seibold SA, Singh BN, Zhang C, Kireeva M, Domecq C, Bouchard A, Nazione AM, Feig M, Cukier RI, Coulombe B, Kashlev M, Hampsey M, Burton ZF.

Biochim Biophys Acta. 2010 Aug;1799(8):575-87. doi: 10.1016/j.bbagrm.2010.05.002. Epub 2010 May 15.

PMID:
20478425
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

New insights into the biogenesis of nuclear RNA polymerases?

Cloutier P, Coulombe B.

Biochem Cell Biol. 2010 Apr;88(2):211-21. doi: 10.1139/o09-173. Review.

PMID:
20453924
[PubMed - indexed for MEDLINE]
19.

Detection of locally over-represented GO terms in protein-protein interaction networks.

Lavallée-Adam M, Coulombe B, Blanchette M.

J Comput Biol. 2010 Mar;17(3):443-57. doi: 10.1089/cmb.2009.0165.

PMID:
20377456
[PubMed - indexed for MEDLINE]
20.

Site-directed mutagenesis, purification and assay of Saccharomyces cerevisiae RNA polymerase II.

Domecq C, Kireeva M, Archambault J, Kashlev M, Coulombe B, Burton ZF.

Protein Expr Purif. 2010 Jan;69(1):83-90. doi: 10.1016/j.pep.2009.06.016. Epub 2009 Jun 28.

PMID:
19567268
[PubMed - indexed for MEDLINE]
Free PMC Article

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