Format
Items per page
Sort by

Send to:

Choose Destination

Search results

Items: 12

1.

Transcriptome Remodeling in Trypanosoma cruzi and Human Cells during Intracellular Infection.

Li Y, Shah-Simpson S, Okrah K, Belew AT, Choi J, Caradonna KL, Padmanabhan P, Ndegwa DM, Temanni MR, Corrada Bravo H, El-Sayed NM, Burleigh BA.

PLoS Pathog. 2016 Apr 5;12(4):e1005511. doi: 10.1371/journal.ppat.1005511. eCollection 2016 Apr.

2.

Simultaneous transcriptional profiling of Leishmania major and its murine macrophage host cell reveals insights into host-pathogen interactions.

Dillon LA, Suresh R, Okrah K, Corrada Bravo H, Mosser DM, El-Sayed NM.

BMC Genomics. 2015 Dec 29;16(1):1108. doi: 10.1186/s12864-015-2237-2.

3.

Epiviz: a view inside the design of an integrated visual analysis software for genomics.

Chelaru F, Corrada Bravo H.

BMC Bioinformatics. 2015;16 Suppl 11:S4. doi: 10.1186/1471-2105-16-S11-S4. Epub 2015 Aug 13.

4.

Transcriptomic profiling of gene expression and RNA processing during Leishmania major differentiation.

Dillon LA, Okrah K, Hughitt VK, Suresh R, Li Y, Fernandes MC, Belew AT, Corrada Bravo H, Mosser DM, El-Sayed NM.

Nucleic Acids Res. 2015 Aug 18;43(14):6799-813. doi: 10.1093/nar/gkv656. Epub 2015 Jul 6.

5.

Shape analysis of high-throughput transcriptomics experiment data.

Okrah K, Corrada Bravo H.

Biostatistics. 2015 Oct;16(4):627-40. doi: 10.1093/biostatistics/kxv018. Epub 2015 May 11.

PMID:
25964664
6.

Removing batch effects for prediction problems with frozen surrogate variable analysis.

Parker HS, Corrada Bravo H, Leek JT.

PeerJ. 2014 Sep 23;2:e561. doi: 10.7717/peerj.561. eCollection 2014.

7.

Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition.

Pop M, Walker AW, Paulson J, Lindsay B, Antonio M, Hossain MA, Oundo J, Tamboura B, Mai V, Astrovskaya I, Corrada Bravo H, Rance R, Stares M, Levine MM, Panchalingam S, Kotloff K, Ikumapayi UN, Ebruke C, Adeyemi M, Ahmed D, Ahmed F, Alam MT, Amin R, Siddiqui S, Ochieng JB, Ouma E, Juma J, Mailu E, Omore R, Morris JG, Breiman RF, Saha D, Parkhill J, Nataro JP, Stine OC.

Genome Biol. 2014 Jun 27;15(6):R76. doi: 10.1186/gb-2014-15-6-r76.

8.

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.

Aryee MJ, Jaffe AE, Corrada-Bravo H, Ladd-Acosta C, Feinberg AP, Hansen KD, Irizarry RA.

Bioinformatics. 2014 May 15;30(10):1363-9. doi: 10.1093/bioinformatics/btu049. Epub 2014 Jan 28.

9.

Determinants of expression variability.

Alemu EY, Carl JW Jr, Corrada Bravo H, Hannenhalli S.

Nucleic Acids Res. 2014 Apr;42(6):3503-14. doi: 10.1093/nar/gkt1364. Epub 2014 Jan 15.

10.

BlindCall: ultra-fast base-calling of high-throughput sequencing data by blind deconvolution.

Ye C, Hsiao C, Corrada Bravo H.

Bioinformatics. 2014 May 1;30(9):1214-9. doi: 10.1093/bioinformatics/btu010. Epub 2014 Jan 9.

11.

RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms and GTPase binding in bipolar disorder.

Akula N, Barb J, Jiang X, Wendland JR, Choi KH, Sen SK, Hou L, Chen DT, Laje G, Johnson K, Lipska BK, Kleinman JE, Corrada-Bravo H, Detera-Wadleigh S, Munson PJ, McMahon FJ.

Mol Psychiatry. 2014 Nov;19(11):1179-85. doi: 10.1038/mp.2013.170. Epub 2014 Jan 7.

PMID:
24393808
12.

Overcoming bias and systematic errors in next generation sequencing data.

Taub MA, Corrada Bravo H, Irizarry RA.

Genome Med. 2010 Dec 10;2(12):87. doi: 10.1186/gm208.

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Loading ...
Write to the Help Desk