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Results: 1 to 20 of 131

1.

Insulator function and topological domain border strength scale with architectural protein occupancy.

Van Bortle K, Nichols MH, Li L, Ong CT, Takenaka N, Qin ZS, Corces VG.

Genome Biol. 2014 Jun 30;15(5):R82. [Epub ahead of print]

PMID:
24981874
[PubMed - as supplied by publisher]
2.

Lost in Transition: Dynamic Enhancer Organization across Naive and Primed Stem Cell States.

Van Bortle K, Corces VG.

Cell Stem Cell. 2014 Jun 5;14(6):693-4. doi: 10.1016/j.stem.2014.05.004.

PMID:
24905156
[PubMed - in process]
3.

CTCF: an architectural protein bridging genome topology and function.

Ong CT, Corces VG.

Nat Rev Genet. 2014 Apr;15(4):234-46. doi: 10.1038/nrg3663. Epub 2014 Mar 11. Review.

PMID:
24614316
[PubMed - indexed for MEDLINE]
4.

Poly(ADP-ribosyl)ation regulates insulator function and intrachromosomal interactions in Drosophila.

Ong CT, Van Bortle K, Ramos E, Corces VG.

Cell. 2013 Sep 26;155(1):148-59. doi: 10.1016/j.cell.2013.08.052. Epub 2013 Sep 19.

PMID:
24055367
[PubMed - indexed for MEDLINE]
5.

Distinct isoforms of the Drosophila Brd4 homologue are present at enhancers, promoters and insulator sites.

Kellner WA, Van Bortle K, Li L, Ramos E, Takenaka N, Corces VG.

Nucleic Acids Res. 2013 Nov 1;41(20):9274-83. doi: 10.1093/nar/gkt722. Epub 2013 Aug 13.

PMID:
23945939
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

The Drosophila transcription factor Adf-1 (nalyot) regulates dendrite growth by controlling FasII and Staufen expression downstream of CaMKII and neural activity.

Timmerman C, Suppiah S, Gurudatta BV, Yang J, Banerjee C, Sandstrom DJ, Corces VG, Sanyal S.

J Neurosci. 2013 Jul 17;33(29):11916-31. doi: 10.1523/JNEUROSCI.1760-13.2013.

PMID:
23864680
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Chromatin insulators: linking genome organization to cellular function.

Phillips-Cremins JE, Corces VG.

Mol Cell. 2013 May 23;50(4):461-74. doi: 10.1016/j.molcel.2013.04.018. Review.

PMID:
23706817
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Architectural protein subclasses shape 3D organization of genomes during lineage commitment.

Phillips-Cremins JE, Sauria ME, Sanyal A, Gerasimova TI, Lajoie BR, Bell JS, Ong CT, Hookway TA, Guo C, Sun Y, Bland MJ, Wagstaff W, Dalton S, McDevitt TC, Sen R, Dekker J, Taylor J, Corces VG.

Cell. 2013 Jun 6;153(6):1281-95. doi: 10.1016/j.cell.2013.04.053. Epub 2013 May 23.

PMID:
23706625
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Dynamic changes in the genomic localization of DNA replication-related element binding factor during the cell cycle.

Gurudatta BV, Yang J, Van Bortle K, Donlin-Asp PG, Corces VG.

Cell Cycle. 2013 May 15;12(10):1605-15. doi: 10.4161/cc.24742. Epub 2013 Apr 25.

PMID:
23624840
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Spinning the web of cell fate.

Van Bortle K, Corces VG.

Cell. 2013 Mar 14;152(6):1213-7. doi: 10.1016/j.cell.2013.02.052. Review.

PMID:
23498930
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A subset of Drosophila Myc sites remain associated with mitotic chromosomes colocalized with insulator proteins.

Yang J, Sung E, Donlin-Asp PG, Corces VG.

Nat Commun. 2013;4:1464. doi: 10.1038/ncomms2469.

PMID:
23403565
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Identification and characterization of proteins involved in nuclear organization using Drosophila GFP protein trap lines.

Rohrbaugh M, Clore A, Davis J, Johnson S, Jones B, Jones K, Kim J, Kithuka B, Lunsford K, Mitchell J, Mott B, Ramos E, Tchedou MR, Acosta G, Araujo M, Cushing S, Duffy G, Graves F, Griffin K, Gurudatta BV, Jackson D, Jaimes D, Jamison K, Jones K, Kelley D, Kilgore M, Laramore D, Le T, Mazhar B, Mazhar MM, McCrary B, Miller T, Moreland C, Mullins A, Munye E, Okoorie S, Pittman E, Roberts N, Rose D, Rowland A, Shagarabi A, Smith J, Stallworth T, Stroud N, Sung E, Sung K, Takenaka N, Torre E, Veira J, Vu K, Wagstaff W, Wood AM, Wu K, Yang J, Corces VG.

PLoS One. 2013;8(1):e53091. doi: 10.1371/journal.pone.0053091. Epub 2013 Jan 16.

PMID:
23341925
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The role of chromatin insulators in nuclear architecture and genome function.

Van Bortle K, Corces VG.

Curr Opin Genet Dev. 2013 Apr;23(2):212-8. doi: 10.1016/j.gde.2012.11.003. Epub 2013 Jan 5. Review.

PMID:
23298659
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Gene density, transcription, and insulators contribute to the partition of the Drosophila genome into physical domains.

Hou C, Li L, Qin ZS, Corces VG.

Mol Cell. 2012 Nov 9;48(3):471-84. doi: 10.1016/j.molcel.2012.08.031. Epub 2012 Oct 4.

PMID:
23041285
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Nuclear organization and genome function.

Van Bortle K, Corces VG.

Annu Rev Cell Dev Biol. 2012;28:163-87. doi: 10.1146/annurev-cellbio-101011-155824. Epub 2012 Aug 17. Review.

PMID:
22905954
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

The BEAF-32 insulator coordinates genome organization and function during the evolution of Drosophila species.

Yang J, Ramos E, Corces VG.

Genome Res. 2012 Nov;22(11):2199-207. doi: 10.1101/gr.142125.112. Epub 2012 Aug 15.

PMID:
22895281
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

tDNA insulators and the emerging role of TFIIIC in genome organization.

Van Bortle K, Corces VG.

Transcription. 2012 Nov-Dec;3(6):277-84. doi: 10.4161/trns.21579. Epub 2012 Aug 14. Review.

PMID:
22889843
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The BEAF insulator regulates genes involved in cell polarity and neoplastic growth.

Gurudatta BV, Ramos E, Corces VG.

Dev Biol. 2012 Sep 1;369(1):124-32. doi: 10.1016/j.ydbio.2012.06.013. Epub 2012 Jun 26.

PMID:
22743648
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Drosophila CTCF tandemly aligns with other insulator proteins at the borders of H3K27me3 domains.

Van Bortle K, Ramos E, Takenaka N, Yang J, Wahi JE, Corces VG.

Genome Res. 2012 Nov;22(11):2176-87. doi: 10.1101/gr.136788.111. Epub 2012 Jun 21.

PMID:
22722341
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Genome-wide phosphoacetylation of histone H3 at Drosophila enhancers and promoters.

Kellner WA, Ramos E, Van Bortle K, Takenaka N, Corces VG.

Genome Res. 2012 Jun;22(6):1081-8. doi: 10.1101/gr.136929.111. Epub 2012 Apr 16.

PMID:
22508764
[PubMed - indexed for MEDLINE]
Free PMC Article

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