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Results: 1 to 20 of 37

1.

mRNA-Seq and microarray development for the Grooved Carpet shell clam, Ruditapes decussatus: a functional approach to unravel host-parasite interaction.

Leite RB, Milan M, Coppe A, Bortoluzzi S, dos Anjos A, Reinhardt R, Saavedra C, Patarnello T, Cancela ML, Bargelloni L.

BMC Genomics. 2013 Oct 29;14:741. doi: 10.1186/1471-2164-14-741.

PMID:
24168212
[PubMed - in process]
Free PMC Article
2.

Transcriptome sequencing and de novo annotation of the critically endangered Adriatic sturgeon.

Vidotto M, Grapputo A, Boscari E, Barbisan F, Coppe A, Grandi G, Kumar A, Congiu L.

BMC Genomics. 2013 Jun 18;14:407. doi: 10.1186/1471-2164-14-407.

PMID:
23773438
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genome evolution in the cold: Antarctic icefish muscle transcriptome reveals selective duplications increasing mitochondrial function.

Coppe A, Agostini C, Marino IA, Zane L, Bargelloni L, Bortoluzzi S, Patarnello T.

Genome Biol Evol. 2013;5(1):45-60. doi: 10.1093/gbe/evs108.

PMID:
23196969
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Sequencing and characterization of striped venus transcriptome expand resources for clam fishery genetics.

Coppe A, Bortoluzzi S, Murari G, Marino IA, Zane L, Papetti C.

PLoS One. 2012;7(9):e44185. doi: 10.1371/journal.pone.0044185. Epub 2012 Sep 18.

PMID:
23028497
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Surviving in a toxic world: transcriptomics and gene expression profiling in response to environmental pollution in the critically endangered European eel.

Pujolar JM, Marino IA, Milan M, Coppe A, Maes GE, Capoccioni F, Ciccotti E, Bervoets L, Covaci A, Belpaire C, Cramb G, Patarnello T, Bargelloni L, Bortoluzzi S, Zane L.

BMC Genomics. 2012 Sep 25;13:507. doi: 10.1186/1471-2164-13-507.

PMID:
23009661
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

The effect of a cognitive-motor intervention on voluntary step execution under single and dual task conditions in older adults: a randomized controlled pilot study.

Pichierri G, Coppe A, Lorenzetti S, Murer K, de Bruin ED.

Clin Interv Aging. 2012;7:175-84. doi: 10.2147/CIA.S32558. Epub 2012 Jul 10.

PMID:
22865999
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

MAGIA²: from miRNA and genes expression data integrative analysis to microRNA-transcription factor mixed regulatory circuits (2012 update).

Bisognin A, Sales G, Coppe A, Bortoluzzi S, Romualdi C.

Nucleic Acids Res. 2012 Jul;40(Web Server issue):W13-21. doi: 10.1093/nar/gks460. Epub 2012 May 21.

PMID:
22618880
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Impact of host genes and strand selection on miRNA and miRNA* expression.

Biasiolo M, Sales G, Lionetti M, Agnelli L, Todoerti K, Bisognin A, Coppe A, Romualdi C, Neri A, Bortoluzzi S.

PLoS One. 2011;6(8):e23854. doi: 10.1371/journal.pone.0023854. Epub 2011 Aug 31.

PMID:
21909367
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Transcriptome sequencing and microarray development for the Manila clam, Ruditapes philippinarum: genomic tools for environmental monitoring.

Milan M, Coppe A, Reinhardt R, Cancela LM, Leite RB, Saavedra C, Ciofi C, Chelazzi G, Patarnello T, Bortoluzzi S, Bargelloni L.

BMC Genomics. 2011 May 12;12:234. doi: 10.1186/1471-2164-12-234.

PMID:
21569398
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

TRAM (Transcriptome Mapper): database-driven creation and analysis of transcriptome maps from multiple sources.

Lenzi L, Facchin F, Piva F, Giulietti M, Pelleri MC, Frabetti F, Vitale L, Casadei R, Canaider S, Bortoluzzi S, Coppe A, Danieli GA, Principato G, Ferrari S, Strippoli P.

BMC Genomics. 2011 Feb 18;12:121. doi: 10.1186/1471-2164-12-121.

PMID:
21333005
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Sequencing, de novo annotation and analysis of the first Anguilla anguilla transcriptome: EeelBase opens new perspectives for the study of the critically endangered European eel.

Coppe A, Pujolar JM, Maes GE, Larsen PF, Hansen MM, Bernatchez L, Zane L, Bortoluzzi S.

BMC Genomics. 2010 Nov 16;11:635. doi: 10.1186/1471-2164-11-635.

PMID:
21080939
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

MAGIA, a web-based tool for miRNA and Genes Integrated Analysis.

Sales G, Coppe A, Bisognin A, Biasiolo M, Bortoluzzi S, Romualdi C.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W352-9. doi: 10.1093/nar/gkq423. Epub 2010 May 19.

PMID:
20484379
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Impact of probe annotation on the integration of miRNA-mRNA expression profiles for miRNA target detection.

Sales G, Coppe A, Bicciato S, Bortoluzzi S, Romualdi C.

Nucleic Acids Res. 2010 Apr;38(7):e97. doi: 10.1093/nar/gkp1239. Epub 2010 Jan 13.

PMID:
20071740
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Microperimetric retinal changes in myopic choroidal neovascularization treated with intravitreal ranibizumab.

Varano M, Tedeschi M, Oddone F, Perillo L, Coppè AM, Parravano M.

Retina. 2010 Mar;30(3):413-7. doi: 10.1097/IAE.0b013e3181bd2d23.

PMID:
20010453
[PubMed - indexed for MEDLINE]
15.

A-MADMAN: annotation-based microarray data meta-analysis tool.

Bisognin A, Coppe A, Ferrari F, Risso D, Romualdi C, Bicciato S, Bortoluzzi S.

BMC Bioinformatics. 2009 Jun 29;10:201. doi: 10.1186/1471-2105-10-201.

PMID:
19563634
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Motif discovery in promoters of genes co-localized and co-expressed during myeloid cells differentiation.

Coppe A, Ferrari F, Bisognin A, Danieli GA, Ferrari S, Bicciato S, Bortoluzzi S.

Nucleic Acids Res. 2009 Feb;37(2):533-49. doi: 10.1093/nar/gkn948. Epub 2008 Dec 5.

PMID:
19059999
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Fellow eye findings of highly myopic subjects operated for retinal detachment associated with a macular hole.

Ripandelli G, Coppé AM, Parisi V, Stirpe M.

Ophthalmology. 2008 Sep;115(9):1489-93. doi: 10.1016/j.ophtha.2008.02.016. Epub 2008 Apr 24.

PMID:
18439680
[PubMed - indexed for MEDLINE]
18.

Posterior vitreous detachment and retinal detachment following cataract extraction.

Coppé AM, Lapucci G.

Curr Opin Ophthalmol. 2008 May;19(3):239-42. doi: 10.1097/ICU.0b013e3282fc9c4a. Review.

PMID:
18408500
[PubMed - indexed for MEDLINE]
19.

Novel definition files for human GeneChips based on GeneAnnot.

Ferrari F, Bortoluzzi S, Coppe A, Sirota A, Safran M, Shmoish M, Ferrari S, Lancet D, Danieli GA, Bicciato S.

BMC Bioinformatics. 2007 Nov 15;8:446.

PMID:
18005434
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Genomic expression during human myelopoiesis.

Ferrari F, Bortoluzzi S, Coppe A, Basso D, Bicciato S, Zini R, Gemelli C, Danieli GA, Ferrari S.

BMC Genomics. 2007 Aug 3;8:264.

PMID:
17683550
[PubMed - indexed for MEDLINE]
Free PMC Article

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