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Results: 1 to 20 of 207

1.

"Dark matter" worlds of unstable RNA and protein.

Baboo S, Cook PR.

Nucleus. 2014 Jun 20;5(4). [Epub ahead of print] Review.

PMID:
24949987
[PubMed - as supplied by publisher]
Free Article
2.

Most Human Proteins Made in Both Nucleus and Cytoplasm Turn Over within Minutes.

Baboo S, Bhushan B, Jiang H, Grovenor CR, Pierre P, Davis BG, Cook PR.

PLoS One. 2014 Jun 9;9(6):e99346. doi: 10.1371/journal.pone.0099346. eCollection 2014.

PMID:
24911415
[PubMed - in process]
Free PMC Article
3.

The HNF4A R76W mutation causes atypical dominant Fanconi syndrome in addition to a β cell phenotype.

Hamilton AJ, Bingham C, McDonald TJ, Cook PR, Caswell RC, Weedon MN, Oram RA, Shields BM, Shepherd M, Inward CD, Hamilton-Shield JP, Kohlhase J, Ellard S, Hattersley AT.

J Med Genet. 2014 Mar;51(3):165-9. doi: 10.1136/jmedgenet-2013-102066. Epub 2013 Nov 27.

PMID:
24285859
[PubMed - in process]
Free PMC Article
4.

Nonspecific bridging-induced attraction drives clustering of DNA-binding proteins and genome organization.

Brackley CA, Taylor S, Papantonis A, Cook PR, Marenduzzo D.

Proc Natl Acad Sci U S A. 2013 Sep 17;110(38):E3605-11. doi: 10.1073/pnas.1302950110. Epub 2013 Sep 3.

PMID:
24003126
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Multiscale spatial organization of RNA polymerase in Escherichia coli.

Endesfelder U, Finan K, Holden SJ, Cook PR, Kapanidis AN, Heilemann M.

Biophys J. 2013 Jul 2;105(1):172-81. doi: 10.1016/j.bpj.2013.05.048.

PMID:
23823236
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Transcription factories: genome organization and gene regulation.

Papantonis A, Cook PR.

Chem Rev. 2013 Nov 13;113(11):8683-705. doi: 10.1021/cr300513p. Epub 2013 Apr 18. Review. No abstract available.

PMID:
23597155
[PubMed - indexed for MEDLINE]
7.

Promoter type influences transcriptional topography by targeting genes to distinct nucleoplasmic sites.

Larkin JD, Papantonis A, Cook PR.

J Cell Sci. 2013 May 1;126(Pt 9):2052-9. doi: 10.1242/jcs.123653. Epub 2013 Feb 26.

PMID:
23444365
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Derivation of a new banded waveguide model topology for sound synthesis.

Fink AM, Spanias AS, Cook PR.

J Acoust Soc Am. 2013 Feb;133(2):EL76-81. doi: 10.1121/1.4773287.

PMID:
23363197
[PubMed - indexed for MEDLINE]
9.

Space exploration by the promoter of a long human gene during one transcription cycle.

Larkin JD, Papantonis A, Cook PR, Marenduzzo D.

Nucleic Acids Res. 2013 Feb 1;41(4):2216-27. doi: 10.1093/nar/gks1441. Epub 2013 Jan 8.

PMID:
23303786
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

TNFα signals through specialized factories where responsive coding and miRNA genes are transcribed.

Papantonis A, Kohro T, Baboo S, Larkin JD, Deng B, Short P, Tsutsumi S, Taylor S, Kanki Y, Kobayashi M, Li G, Poh HM, Ruan X, Aburatani H, Ruan Y, Kodama T, Wada Y, Cook PR.

EMBO J. 2012 Nov 28;31(23):4404-14. doi: 10.1038/emboj.2012.288. Epub 2012 Oct 26.

PMID:
23103767
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Maximum precision closed-form solution for localizing diffraction-limited spots in noisy images.

Larkin JD, Cook PR.

Opt Express. 2012 Jul 30;20(16):18478-93. doi: 10.1364/OE.20.018478.

PMID:
23038398
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

T7 RNA polymerase functions in vitro without clustering.

Finan K, Torella JP, Kapanidis AN, Cook PR.

PLoS One. 2012;7(7):e40207. doi: 10.1371/journal.pone.0040207. Epub 2012 Jul 2.

PMID:
22768341
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Dynamic reconfiguration of long human genes during one transcription cycle.

Larkin JD, Cook PR, Papantonis A.

Mol Cell Biol. 2012 Jul;32(14):2738-47. doi: 10.1128/MCB.00179-12. Epub 2012 May 14.

PMID:
22586273
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genetic susceptibility to experimental autoimmune glomerulonephritis in the Wistar Kyoto rat.

Reynolds J, Cook PR, Behmoaras J, Smith J, Bhangal G, Tadros S, Tee J, Salama AD, Evans DJ, Aitman TJ, Cook HT, Pusey CD.

Am J Pathol. 2012 May;180(5):1843-51. doi: 10.1016/j.ajpath.2012.01.029. Epub 2012 Mar 22.

PMID:
22445570
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Transcription factories, chromatin loops, and the dysregulation of gene expression in malignancy.

Deng B, Melnik S, Cook PR.

Semin Cancer Biol. 2013 Apr;23(2):65-71. doi: 10.1016/j.semcancer.2012.01.003. Epub 2012 Jan 20. Review.

PMID:
22285981
[PubMed - indexed for MEDLINE]
16.

Enhancers and silencers: an integrated and simple model for their function.

Kolovos P, Knoch TA, Grosveld FG, Cook PR, Papantonis A.

Epigenetics Chromatin. 2012 Jan 9;5(1):1. doi: 10.1186/1756-8935-5-1.

PMID:
22230046
[PubMed]
Free PMC Article
17.

The proteomes of transcription factories containing RNA polymerases I, II or III.

Melnik S, Deng B, Papantonis A, Baboo S, Carr IM, Cook PR.

Nat Methods. 2011 Sep 25;8(11):963-8. doi: 10.1038/nmeth.1705.

PMID:
21946667
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

HTLV-1 HBZ protein deregulates interactions between cellular factors and the KIX domain of p300/CBP.

Cook PR, Polakowski N, Lemasson I.

J Mol Biol. 2011 Jun 10;409(3):384-98. doi: 10.1016/j.jmb.2011.04.003. Epub 2011 Apr 8.

PMID:
21497608
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Only a patent right external carotid and left vertebral artery in a neurologically asymptomatic patient.

Hofmann LJ, Cook PR, Weber MA, Aidinian G.

J Vasc Surg. 2012 Mar;55(3):847. doi: 10.1016/j.jvs.2010.12.065. Epub 2011 Mar 31. No abstract available.

PMID:
21458202
[PubMed - indexed for MEDLINE]
Free Article
20.

Fixing the model for transcription: the DNA moves, not the polymerase.

Papantonis A, Cook PR.

Transcription. 2011 Jan-Feb;2(1):41-4. doi: 10.4161/trns.2.1.14275. Review.

PMID:
21326910
[PubMed - indexed for MEDLINE]
Free PMC Article

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