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Results: 1 to 20 of 41

1.

Comparative Genomics as a Time Machine: How Relative Gene Dosage and Metabolic Requirements Shaped the Time-dependent Resolution of Yeast Polyploidy.

Conant GC.

Mol Biol Evol. 2014 Aug 25. pii: msu250. [Epub ahead of print]

PMID:
25158798
[PubMed - as supplied by publisher]
2.

The yeast protein interaction network has a capacity for self-organization.

Dhroso A, Korkin D, Conant GC.

FEBS J. 2014 Aug;281(15):3420-32. doi: 10.1111/febs.12870. Epub 2014 Jul 1.

PMID:
24924781
[PubMed - in process]
3.

Dosage, duplication, and diploidization: clarifying the interplay of multiple models for duplicate gene evolution over time.

Conant GC, Birchler JA, Pires JC.

Curr Opin Plant Biol. 2014 Jun;19:91-8. doi: 10.1016/j.pbi.2014.05.008. Epub 2014 Jun 5.

PMID:
24907529
[PubMed - in process]
4.

Gene duplication and phenotypic changes in the evolution of mammalian metabolic networks.

Bekaert M, Conant GC.

PLoS One. 2014 Jan 28;9(1):e87115. doi: 10.1371/journal.pone.0087115. eCollection 2014.

PMID:
24489850
[PubMed - in process]
Free PMC Article
5.

Diet alters both the structure and taxonomy of the ovine gut microbial ecosystem.

Ellison MJ, Conant GC, Cockrum RR, Austin KJ, Truong H, Becchi M, Lamberson WR, Cammack KM.

DNA Res. 2014;21(2):115-25. doi: 10.1093/dnares/dst044. Epub 2013 Oct 29.

PMID:
24170804
[PubMed - in process]
Free PMC Article
6.

Watching the grin fade: tracing the effects of polyploidy on different evolutionary time scales.

Mayfield-Jones D, Washburn JD, Arias T, Edger PP, Pires JC, Conant GC.

Semin Cell Dev Biol. 2013 Apr;24(4):320-31. doi: 10.1016/j.semcdb.2013.02.002. Epub 2013 Mar 1. Review.

PMID:
23466286
[PubMed - indexed for MEDLINE]
7.

A conserved mammalian protein interaction network.

Pérez-Bercoff Å, Hudson CM, Conant GC.

PLoS One. 2013;8(1):e52581. doi: 10.1371/journal.pone.0052581. Epub 2013 Jan 2.

PMID:
23320073
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Metabolic and evolutionary costs of herbivory defense: systems biology of glucosinolate synthesis.

Bekaert M, Edger PP, Hudson CM, Pires JC, Conant GC.

New Phytol. 2012 Oct;196(2):596-605. doi: 10.1111/j.1469-8137.2012.04302.x. Epub 2012 Sep 4.

PMID:
22943527
[PubMed - indexed for MEDLINE]
9.

Polyploidy and the evolution of complex traits.

Huminiecki L, Conant GC.

Int J Evol Biol. 2012;2012:292068. doi: 10.1155/2012/292068. Epub 2012 Jul 30.

PMID:
22900230
[PubMed]
Free PMC Article
10.

Very low rate of gene conversion in the yeast genome.

Casola C, Conant GC, Hahn MW.

Mol Biol Evol. 2012 Dec;29(12):3817-26. doi: 10.1093/molbev/mss192. Epub 2012 Jul 27.

PMID:
22844073
[PubMed - indexed for MEDLINE]
Free Article
11.

Cloning and characterization of the peptidoglycan recognition protein genes in the mosquito, Armigeres subalbatus (Diptera: Culicidae).

Wang S, Conant GC, Ou R, Beerntsen BT.

J Med Entomol. 2012 May;49(3):656-71.

PMID:
22679875
[PubMed - indexed for MEDLINE]
12.

Long identical multispecies elements in plant and animal genomes.

Reneker J, Lyons E, Conant GC, Pires JC, Freeling M, Shyu CR, Korkin D.

Proc Natl Acad Sci U S A. 2012 May 8;109(19):E1183-91. doi: 10.1073/pnas.1121356109. Epub 2012 Apr 10.

PMID:
22496592
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Selection for higher gene copy number after different types of plant gene duplications.

Hudson CM, Puckett EE, Bekaert M, Pires JC, Conant GC.

Genome Biol Evol. 2011;3:1369-80. doi: 10.1093/gbe/evr115. Epub 2011 Nov 4.

PMID:
22056313
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Patterns of indirect protein interactions suggest a spatial organization to metabolism.

Pérez-Bercoff Å, McLysaght A, Conant GC.

Mol Biosyst. 2011 Nov;7(11):3056-64. doi: 10.1039/c1mb05168g. Epub 2011 Aug 31.

PMID:
21881679
[PubMed - indexed for MEDLINE]
15.

Transcriptional robustness and protein interactions are associated in yeast.

Bekaert M, Conant GC.

BMC Syst Biol. 2011 May 5;5:62. doi: 10.1186/1752-0509-5-62.

PMID:
21545728
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Two-phase resolution of polyploidy in the Arabidopsis metabolic network gives rise to relative and absolute dosage constraints.

Bekaert M, Edger PP, Pires JC, Conant GC.

Plant Cell. 2011 May;23(5):1719-28. doi: 10.1105/tpc.110.081281. Epub 2011 May 3.

PMID:
21540436
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Expression level, cellular compartment and metabolic network position all influence the average selective constraint on mammalian enzymes.

Hudson CM, Conant GC.

BMC Evol Biol. 2011 Apr 6;11:89. doi: 10.1186/1471-2148-11-89.

PMID:
21470417
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Copy number alterations among mammalian enzymes cluster in the metabolic network.

Bekaert M, Conant GC.

Mol Biol Evol. 2011 Feb;28(2):1111-21. doi: 10.1093/molbev/msq296. Epub 2010 Nov 3.

PMID:
21051442
[PubMed - indexed for MEDLINE]
Free Article
19.

Nonrandom survival of gene conversions among yeast ribosomal proteins duplicated through genome doubling.

Evangelisti AM, Conant GC.

Genome Biol Evol. 2010;2:826-34. doi: 10.1093/gbe/evq067. Epub 2010 Oct 21.

PMID:
20966100
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

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