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Results: 1 to 20 of 34

1.

Identification of a Set of Conserved Eukaryotic Internal Retention Time Standards for Data-Independent Acquisition Mass Spectrometry.

Parker SJ, Roest H, Rosenberger G, Collins BC, Malstroem L, Amodei D, Venkatraman V, Raedschelders K, Van Eyk JE, Aebersold R.

Mol Cell Proteomics. 2015 Jul 21. pii: mcp.O114.042267. [Epub ahead of print]

2.

Assessment of a method to characterize antibody selectivity and specificity for use in immunoprecipitation.

Marcon E, Jain H, Bhattacharya A, Guo H, Phanse S, Pu S, Byram G, Collins BC, Dowdell E, Fenner M, Guo X, Hutchinson A, Kennedy JJ, Krastins B, Larsen B, Lin ZY, Lopez MF, Loppnau P, Miersch S, Nguyen T, Olsen JB, Paduch M, Ravichandran M, Seitova A, Vadali G, Vogelsang MS, Whiteaker JR, Zhong G, Zhong N, Zhao L, Aebersold R, Arrowsmith CH, Emili A, Frappier L, Gingras AC, Gstaiger M, Paulovich AG, Koide S, Kossiakoff AA, Sidhu SS, Wodak SJ, Gräslund S, Greenblatt JF, Edwards AM.

Nat Methods. 2015 Aug;12(8):725-31. doi: 10.1038/nmeth.3472. Epub 2015 Jun 29.

PMID:
26121405
3.

Absolute Proteome Composition and Dynamics during Dormancy and Resuscitation of Mycobacterium tuberculosis.

Schubert OT, Ludwig C, Kogadeeva M, Zimmermann M, Rosenberger G, Gengenbacher M, Gillet LC, Collins BC, Röst HL, Kaufmann SH, Sauer U, Aebersold R.

Cell Host Microbe. 2015 Jul 8;18(1):96-108. doi: 10.1016/j.chom.2015.06.001. Epub 2015 Jun 18.

PMID:
26094805
4.

Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps.

Guo T, Kouvonen P, Koh CC, Gillet LC, Wolski WE, Röst HL, Rosenberger G, Collins BC, Blum LC, Gillessen S, Joerger M, Jochum W, Aebersold R.

Nat Med. 2015 Apr;21(4):407-13. doi: 10.1038/nm.3807. Epub 2015 Mar 2.

PMID:
25730263
5.

Building high-quality assay libraries for targeted analysis of SWATH MS data.

Schubert OT, Gillet LC, Collins BC, Navarro P, Rosenberger G, Wolski WE, Lam H, Amodei D, Mallick P, MacLean B, Aebersold R.

Nat Protoc. 2015 Mar;10(3):426-41. doi: 10.1038/nprot.2015.015. Epub 2015 Feb 12.

PMID:
25675208
6.

Quantitative variability of 342 plasma proteins in a human twin population.

Liu Y, Buil A, Collins BC, Gillet LC, Blum LC, Cheng LY, Vitek O, Mouritsen J, Lachance G, Spector TD, Dermitzakis ET, Aebersold R.

Mol Syst Biol. 2015 Feb 4;11(1):786. doi: 10.15252/msb.20145728.

7.

The myosin super-relaxed state is disrupted by estradiol deficiency.

Colson BA, Petersen KJ, Collins BC, Lowe DA, Thomas DD.

Biochem Biophys Res Commun. 2015 Jan 2;456(1):151-5. doi: 10.1016/j.bbrc.2014.11.050. Epub 2014 Nov 21.

PMID:
25446114
8.

OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data.

Röst HL, Rosenberger G, Navarro P, Gillet L, Miladinović SM, Schubert OT, Wolski W, Collins BC, Malmström J, Malmström L, Aebersold R.

Nat Biotechnol. 2014 Mar;32(3):219-23. doi: 10.1038/nbt.2841. No abstract available.

PMID:
24727770
9.

A repository of assays to quantify 10,000 human proteins by SWATH-MS.

Rosenberger G, Koh CC, Guo T, Röst HL, Kouvonen P, Collins BC, Heusel M, Liu Y, Caron E, Vichalkovski A, Faini M, Schubert OT, Faridi P, Ebhardt HA, Matondo M, Lam H, Bader SL, Campbell DS, Deutsch EW, Moritz RL, Tate S, Aebersold R.

Sci Data. 2014 Sep 16;1:140031. doi: 10.1038/sdata.2014.31. eCollection 2014.

10.

Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system.

Collins BC, Gillet LC, Rosenberger G, Röst HL, Vichalkovski A, Gstaiger M, Aebersold R.

Nat Methods. 2013 Dec;10(12):1246-53. doi: 10.1038/nmeth.2703. Epub 2013 Oct 27.

PMID:
24162925
11.

The homoeobox gene SIX1 alters myosin heavy chain isoform expression in mouse skeletal muscle.

Hetzler KL, Collins BC, Shanely RA, Sue H, Kostek MC.

Acta Physiol (Oxf). 2014 Feb;210(2):415-28. doi: 10.1111/apha.12168. Epub 2013 Nov 11.

PMID:
24102895
12.

Congregational participation and supports for children and adults with disabilities: parent perceptions.

Ault MJ, Collins BC, Carter EW.

Intellect Dev Disabil. 2013 Feb;51(1):48-61. doi: 10.1352/1934-9556-51.01.048.

PMID:
23360408
13.

Focus on cancer proteomics.

Collins BC, Gallagher WM.

Proteomics. 2012 Jul;12(13):2065-6. doi: 10.1002/pmic.201270084. No abstract available.

PMID:
22807453
14.

Development of a pharmaceutical hepatotoxicity biomarker panel using a discovery to targeted proteomics approach.

Collins BC, Miller CA, Sposny A, Hewitt P, Wells M, Gallagher WM, Pennington SR.

Mol Cell Proteomics. 2012 Aug;11(8):394-410. doi: 10.1074/mcp.M111.016493. Epub 2012 Apr 23.

15.

Serum proteomic profiling reveals that pretreatment complement protein levels are predictive of esophageal cancer patient response to neoadjuvant chemoradiation.

Maher SG, McDowell DT, Collins BC, Muldoon C, Gallagher WM, Reynolds JV.

Ann Surg. 2011 Nov;254(5):809-16; discussion 816-7. doi: 10.1097/SLA.0b013e31823699f2.

PMID:
22005152
16.

Public response to an anthrax attack: reactions to mass prophylaxis in a scenario involving inhalation anthrax from an unidentified source.

SteelFisher G, Blendon R, Ross LJ, Collins BC, Ben-Porath EN, Bekheit MM, Mailhot JR.

Biosecur Bioterror. 2011 Sep;9(3):239-50. doi: 10.1089/bsp.2011.0005. Epub 2011 Aug 5.

PMID:
21819225
17.

Sequence tagging reveals unexpected modifications in toxicoproteomics.

Dasari S, Chambers MC, Codreanu SG, Liebler DC, Collins BC, Pennington SR, Gallagher WM, Tabb DL.

Chem Res Toxicol. 2011 Feb 18;24(2):204-16. doi: 10.1021/tx100275t. Epub 2011 Jan 7.

18.

Absolute quantification of toxicological biomarkers by multiple reaction monitoring.

Lau TY, Collins BC, Stone P, Tang N, Gallagher WM, Pennington SR.

Methods Mol Biol. 2011;691:417-27. doi: 10.1007/978-1-60761-849-2_25.

PMID:
20972768
19.

Differential proteomics incorporating iTRAQ labeling and multi-dimensional separations.

Collins BC, Lau TY, Pennington SR, Gallagher WM.

Methods Mol Biol. 2011;691:369-83. doi: 10.1007/978-1-60761-849-2_23.

PMID:
20972766
20.

The lowdown on laptops: How to get a rugged computer that fits your needs.

Collins BC.

JEMS. 2010 Jul;35(7):60-1. doi: 10.1016/S0197-2510(10)70176-5. No abstract available.

PMID:
20643289
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