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Results: 1 to 20 of 28

1.

Inhibitory effects of extracellular self-DNA: a general biological process?

Mazzoleni S, Cartenì F, Bonanomi G, Senatore M, Termolino P, Giannino F, Incerti G, Rietkerk M, Lanzotti V, Chiusano ML.

New Phytol. 2015 Apr;206(1):127-32. doi: 10.1111/nph.13306. Epub 2015 Jan 28.

PMID:
25628124
2.

Inhibitory and toxic effects of extracellular self-DNA in litter: a mechanism for negative plant-soil feedbacks?

Mazzoleni S, Bonanomi G, Incerti G, Chiusano ML, Termolino P, Mingo A, Senatore M, Giannino F, Cartenì F, Rietkerk M, Lanzotti V.

New Phytol. 2015 Feb;205(3):1195-210. doi: 10.1111/nph.13121. Epub 2014 Oct 29.

PMID:
25354164
3.

Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variations.

Ercolano MR, Sacco A, Ferriello F, D'Alessandro R, Tononi P, Traini A, Barone A, Zago E, Chiusano ML, Buson G, Delledonne M, Frusciante L.

BMC Genomics. 2014 Feb 18;15:138. doi: 10.1186/1471-2164-15-138.

4.

Characterization of the glutathione S-transferase gene family through ESTs and expression analyses within common and pigmented cultivars of Citrus sinensis (L.) Osbeck.

Licciardello C, D'Agostino N, Traini A, Recupero GR, Frusciante L, Chiusano ML.

BMC Plant Biol. 2014 Feb 3;14:39. doi: 10.1186/1471-2229-14-39.

5.

Genome Microscale Heterogeneity among Wild Potatoes Revealed by Diversity Arrays Technology Marker Sequences.

Traini A, Iorizzo M, Mann H, Bradeen JM, Carputo D, Frusciante L, Chiusano ML.

Int J Genomics. 2013;2013:257218. doi: 10.1155/2013/257218. Epub 2013 May 8.

6.

Exploiting a Reference Genome in Terms of Duplications: The Network of Paralogs and Single Copy Genes in Arabidopsis thaliana.

Sangiovanni M, Vigilante A, Chiusano ML.

Biology (Basel). 2013 Dec 9;2(4):1465-87. doi: 10.3390/biology2041465.

7.

Euchromatic and heterochromatic compositional properties emerging from the analysis of Solanum lycopersicum BAC sequences.

Di Filippo M, Traini A, D'Agostino N, Frusciante L, Chiusano ML.

Gene. 2012 May 10;499(1):176-81. doi: 10.1016/j.gene.2012.02.044. Epub 2012 Feb 26.

PMID:
22391094
8.

Evolutionary meta-analysis of solanaceous resistance gene and solanum resistance gene analog sequences and a practical framework for cross-species comparisons.

Quirin EA, Mann H, Meyer RS, Traini A, Chiusano ML, Litt A, Bradeen JM.

Mol Plant Microbe Interact. 2012 May;25(5):603-12. doi: 10.1094/MPMI-12-11-0318-R.

9.

Evolution of anterior Hox regulatory elements among chordates.

Natale A, Sims C, Chiusano ML, Amoroso A, D'Aniello E, Fucci L, Krumlauf R, Branno M, Locascio A.

BMC Evol Biol. 2011 Nov 15;11:330. doi: 10.1186/1471-2148-11-330.

10.

Revealing impaired pathways in the an11 mutant by high-throughput characterization of Petunia axillaris and Petunia inflata transcriptomes.

Zenoni S, D'Agostino N, Tornielli GB, Quattrocchio F, Chiusano ML, Koes R, Zethof J, Guzzo F, Delledonne M, Frusciante L, Gerats T, Pezzotti M.

Plant J. 2011 Oct;68(1):11-27. doi: 10.1111/j.1365-313X.2011.04661.x. Epub 2011 Jul 14.

PMID:
21623977
11.

Estrogen receptor alpha controls a gene network in luminal-like breast cancer cells comprising multiple transcription factors and microRNAs.

Cicatiello L, Mutarelli M, Grober OM, Paris O, Ferraro L, Ravo M, Tarallo R, Luo S, Schroth GP, Seifert M, Zinser C, Chiusano ML, Traini A, De Bortoli M, Weisz A.

Am J Pathol. 2010 May;176(5):2113-30. doi: 10.2353/ajpath.2010.090837. Epub 2010 Mar 26.

12.

SolEST database: a "one-stop shop" approach to the study of Solanaceae transcriptomes.

D'Agostino N, Traini A, Frusciante L, Chiusano ML.

BMC Plant Biol. 2009 Nov 30;9:142. doi: 10.1186/1471-2229-9-142.

13.

Comparative 454 pyrosequencing of transcripts from two olive genotypes during fruit development.

Alagna F, D'Agostino N, Torchia L, Servili M, Rao R, Pietrella M, Giuliano G, Chiusano ML, Baldoni L, Perrotta G.

BMC Genomics. 2009 Aug 26;10:399. doi: 10.1186/1471-2164-10-399.

14.

ISOL@: an Italian SOLAnaceae genomics resource.

Chiusano ML, D'Agostino N, Traini A, Licciardello C, Raimondo E, Aversano M, Frusciante L, Monti L.

BMC Bioinformatics. 2008 Mar 26;9 Suppl 2:S7. doi: 10.1186/1471-2105-9-S2-S7.

15.

Structural and functional genomics of tomato.

Barone A, Chiusano ML, Ercolano MR, Giuliano G, Grandillo S, Frusciante L.

Int J Plant Genomics. 2008;2008:820274. doi: 10.1155/2008/820274.

16.

The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts.

Genome Information Integration Project And H-Invitational 2, Yamasaki C, Murakami K, Fujii Y, Sato Y, Harada E, Takeda J, Taniya T, Sakate R, Kikugawa S, Shimada M, Tanino M, Koyanagi KO, Barrero RA, Gough C, Chun HW, Habara T, Hanaoka H, Hayakawa Y, Hilton PB, Kaneko Y, Kanno M, Kawahara Y, Kawamura T, Matsuya A, Nagata N, Nishikata K, Noda AO, Nurimoto S, Saichi N, Sakai H, Sanbonmatsu R, Shiba R, Suzuki M, Takabayashi K, Takahashi A, Tamura T, Tanaka M, Tanaka S, Todokoro F, Yamaguchi K, Yamamoto N, Okido T, Mashima J, Hashizume A, Jin L, Lee KB, Lin YC, Nozaki A, Sakai K, Tada M, Miyazaki S, Makino T, Ohyanagi H, Osato N, Tanaka N, Suzuki Y, Ikeo K, Saitou N, Sugawara H, O'Donovan C, Kulikova T, Whitfield E, Halligan B, Shimoyama M, Twigger S, Yura K, Kimura K, Yasuda T, Nishikawa T, Akiyama Y, Motono C, Mukai Y, Nagasaki H, Suwa M, Horton P, Kikuno R, Ohara O, Lancet D, Eveno E, Graudens E, Imbeaud S, Debily MA, Hayashizaki Y, Amid C, Han M, Osanger A, Endo T, Thomas MA, Hirakawa M, Makalowski W, Nakao M, Kim NS, Yoo HS, De Souza SJ, Bonaldo Mde F, Niimura Y, Kuryshev V, Schupp I, Wiemann S, Bellgard M, Shionyu M, Jia L, Thierry-Mieg D, Thierry-Mieg J, Wagner L, Zhang Q, Go M, Minoshima S, Ohtsubo M, Hanada K, Tonellato P, Isogai T, Zhang J, Lenhard B, Kim S, Chen Z, Hinz U, Estreicher A, Nakai K, Makalowska I, Hide W, Tiffin N, Wilming L, Chakraborty R, Soares MB, Chiusano ML, Suzuki Y, Auffray C, Yamaguchi-Kabata Y, Itoh T, Hishiki T, Fukuchi S, Nishikawa K, Sugano S, Nomura N, Tateno Y, Imanishi T, Gojobori T.

Nucleic Acids Res. 2008 Jan;36(Database issue):D793-9. Epub 2007 Dec 18.

17.

An EST database from saffron stigmas.

D'Agostino N, Pizzichini D, Chiusano ML, Giuliano G.

BMC Plant Biol. 2007 Oct 9;7:53.

18.

Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome.

D'Agostino N, Traini A, Frusciante L, Chiusano ML.

BMC Bioinformatics. 2007 Mar 8;8 Suppl 1:S9.

19.

TomatEST database: in silico exploitation of EST data to explore expression patterns in tomato species.

D'Agostino N, Aversano M, Frusciante L, Chiusano ML.

Nucleic Acids Res. 2007 Jan;35(Database issue):D901-5. Epub 2006 Nov 16.

20.

ParPEST: a pipeline for EST data analysis based on parallel computing.

D'Agostino N, Aversano M, Chiusano ML.

BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S9.

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